prot_H-paniculata_contig31587.8520.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig31587.8520.1
Unique Nameprot_H-paniculata_contig31587.8520.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length68
Homology
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BLAST of mRNA_H-paniculata_contig31587.8520.1 vs. uniprot
Match: D7FMY4_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMY4_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 1.220e-26
Identity = 49/55 (89.09%), Postives = 50/55 (90.91%), Query Frame = 0 
Query:    1 MFLKCPPRELVLQAPAYIKNTLGAGGVTALAFPPPWFTGTSLPDWILLEQSREKE 55
            MFLKCPPRELV  APAYIK TL AGGVTAL FPPPWFTGT+LPDWILLEQSREKE
Sbjct:  111 MFLKCPPRELVTHAPAYIKETLDAGGVTALEFPPPWFTGTTLPDWILLEQSREKE 165
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BLAST of mRNA_H-paniculata_contig31587.8520.1 vs. uniprot
Match: A0A6H5JQF1_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQF1_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 2.830e-25
Identity = 49/55 (89.09%), Postives = 50/55 (90.91%), Query Frame = 0 
Query:    1 MFLKCPPRELVLQAPAYIKNTLGAGGVTALAFPPPWFTGTSLPDWILLEQSREKE 55
            MFLKCPPRELV  APAYIK TL AGGVTAL FPPPWFTGT+LPDWILLEQSREKE
Sbjct:  385 MFLKCPPRELVTHAPAYIKETLDAGGVTALEFPPPWFTGTTLPDWILLEQSREKE 439
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31587.8520.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMY4_ECTSI1.220e-2689.09Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JQF1_9PHAE2.830e-2589.09Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig31587contigH-paniculata_contig31587:2074..2644 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig31587.8520.1mRNA_H-paniculata_contig31587.8520.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig31587 2047..2644 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig31587.8520.1 ID=prot_H-paniculata_contig31587.8520.1|Name=mRNA_H-paniculata_contig31587.8520.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=68bp
MFLKCPPRELVLQAPAYIKNTLGAGGVTALAFPPPWFTGTSLPDWILLEQ
SREKEVSIHGPTHERVG*
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