prot_H-paniculata_contig3140.8486.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3140.8486.1
Unique Nameprot_H-paniculata_contig3140.8486.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length99
Homology
BLAST of mRNA_H-paniculata_contig3140.8486.1 vs. uniprot
Match: A0A6H5K0D2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0D2_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 1.940e-20
Identity = 41/76 (53.95%), Postives = 58/76 (76.32%), Query Frame = 0
Query:    1 MAFRVTRHVMGALQKERNDVQLALKKTWKAHQHTDGLVTRSISPYQVDLYSSWMKSWPMKLKNRWTETGPECLLAL 76
            MAFR+T  V+GA+ +ERNDVQ AL+K WKA++  DGLV RSISPYQ++L  +++ + P KLK R+ E GPE ++ +
Sbjct:    1 MAFRMTGRVLGAVARERNDVQPALRKVWKAYEPVDGLVIRSISPYQLNLVRNFVTTIPKKLKTRFIEYGPEVMMCV 76          
BLAST of mRNA_H-paniculata_contig3140.8486.1 vs. uniprot
Match: D7G6P4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6P4_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 1.530e-8
Identity = 29/56 (51.79%), Postives = 37/56 (66.07%), Query Frame = 0
Query:    1 MAFRVTRHVMGALQKERNDVQLALKKTWKAHQHTDGLVTRSISPYQVDLYSSWMKS 56
            MAFR+T  V+GA+ +ERNDVQ AL+K WKAH+  DGLV+R    +    Y    KS
Sbjct:    1 MAFRMTGRVLGAVARERNDVQPALRKVWKAHEPVDGLVSREDDAHPSRKYFHKRKS 56          
BLAST of mRNA_H-paniculata_contig3140.8486.1 vs. uniprot
Match: A0A2R5GU00_9STRA (Cytochrome b-c1 complex subunit 8 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GU00_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 5.180e-8
Identity = 25/66 (37.88%), Postives = 41/66 (62.12%), Query Frame = 0
Query:   19 DVQLALKKTWKAHQHTDGLVTRSISPYQVDLYSSWMKSWPMKLKNRWTET----GPECLLALLTLG 80
            +V   L K WK ++  +GLVTR++SPYQ D  + W+K+WP K+K++ ++     GP  L+   T+ 
Sbjct:    7 NVHPGLAKLWKKYKPINGLVTRTVSPYQQDFITPWVKTWPEKMKHKISDNLFDVGPGVLVLFGTVA 72          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3140.8486.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K0D2_9PHAE1.940e-2053.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6P4_ECTSI1.530e-851.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2R5GU00_9STRA5.180e-837.88Cytochrome b-c1 complex subunit 8 n=1 Tax=Hondaea ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3140contigH-paniculata_contig3140:14278..17226 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3140.8486.1mRNA_H-paniculata_contig3140.8486.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3140 14278..18903 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3140.8486.1 ID=prot_H-paniculata_contig3140.8486.1|Name=mRNA_H-paniculata_contig3140.8486.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=99bp
MAFRVTRHVMGALQKERNDVQLALKKTWKAHQHTDGLVTRSISPYQVDLY
SSWMKSWPMKLKNRWTETGPECLLALLTLGIIPFSKIECDWNDLATRD*
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