prot_H-paniculata_contig30773.8335.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig30773.8335.1
Unique Nameprot_H-paniculata_contig30773.8335.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length49
Homology
[Close]
BLAST of mRNA_H-paniculata_contig30773.8335.1 vs. uniprot
Match: A0A6H5JHG7_9PHAE (ANAPC8 domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JHG7_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 8.440e-13
Identity = 32/45 (71.11%), Postives = 39/45 (86.67%), Query Frame = 0 
Query:    1 FFLQHLLLEQHRYKEALSVLDDLHASFPGSSYILAQTAVCRYHMR 45
            FFLQHLL+EQHR K+AL++LDDL  SFP SSY+L+QTAV  YH+R
Sbjct:  330 FFLQHLLVEQHRSKDALAILDDLEPSFPCSSYVLSQTAVAHYHLR 374
[Close]
BLAST of mRNA_H-paniculata_contig30773.8335.1 vs. uniprot
Match: F4PLN6_CAVFA (Anaphase promoting complex subunit 8 n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PLN6_CAVFA)

HSP 1 Score: 50.8 bits (120), Expect = 5.230e-6
Identity = 23/49 (46.94%), Postives = 34/49 (69.39%), Query Frame = 0 
Query:    1 FFLQHLLLEQHRYKEALSVLDDLHASFPGSSYILAQTAVCRYHMRGITI 49
            FFL HLLL+ H+  E+L V + L ++FP S+YILAQ A+C ++ R   +
Sbjct:  313 FFLAHLLLQLHQTSESLQVYNRLLSTFPNSTYILAQIAICNFNQRAYDV 361
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30773.8335.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JHG7_9PHAE8.440e-1371.11ANAPC8 domain-containing protein n=3 Tax=Ectocarpu... [more]
F4PLN6_CAVFA5.230e-646.94Anaphase promoting complex subunit 8 n=1 Tax=Caven... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..48
e-value: 3.6E-7
score: 31.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig30773contigH-paniculata_contig30773:2492..2638 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig30773.8335.1mRNA_H-paniculata_contig30773.8335.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig30773 2492..2638 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig30773.8335.1 ID=prot_H-paniculata_contig30773.8335.1|Name=mRNA_H-paniculata_contig30773.8335.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=49bp
FFLQHLLLEQHRYKEALSVLDDLHASFPGSSYILAQTAVCRYHMRGITI
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf