prot_H-paniculata_contig30700.8323.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig30700.8323.1
Unique Nameprot_H-paniculata_contig30700.8323.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length536
Homology
BLAST of mRNA_H-paniculata_contig30700.8323.1 vs. uniprot
Match: A0A0J7NHJ8_LASNI (Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7NHJ8_LASNI)

HSP 1 Score: 128 bits (321), Expect = 2.100e-27
Identity = 127/482 (26.35%), Postives = 201/482 (41.70%), Query Frame = 0
Query:  115 HCQGSPTVVPKKTDKRTIWAAERLYVDLGGPTRVTSLGGSSYVMTIVDDYSQFQAIESIKKKSDATAAFQSYIAEYITPKEFKIGAIRTDNSGTF-DGDFYLEPDEHGLIHELTPPDTPQYNRVAERRLGLLREKTIALMQDQTEGGSEKLWAEAMNYACDITNMSCTHQMEH-------GATRRKVHHAGYFPQPLERNCP---RSQYQDSIDR-----------------ETSERVMASRECGGLA--------------------------------PEIGGGDDKAIVWTPRLDSSGQVELETTLTMQPHQEDQPLQPEEXXXXXXXXKQDRPGPALRQLTDHFTGQQPSVALAMPEELRGDLPVEPKNHREAQASPEWEHWQRAEEVEMQDLIDIGVWTQVKLPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVTNGNRQIKGIHFQEVSFPAPAAASTKMMLSLAAIQDWELRHID 536
            H Q  P+V     +KRT    E L++DL GP   TSLGGS Y MTIVDD+S+   I  ++KKS A   F+ +  E     E KI AIRTDN   F + +F     + G+ H+ T P TPQ N +AER    + E+   L+ +     +   WAEA + A  + N S    ++H          + K+ H   F      + P   R ++    D+                 E+S++++ +R+   +                                  E+      ++ +    D   +    +  T    +++Q  +PEE        K     PA R   D+ T +   +            P +P   +EA  S   + WQ+A   E   L++   W  V LP  +  +    ++K K   +  VE+YK RLV  G  Q+KG+ ++E   P    AS +++L+LAA  D E+ H+D
Sbjct:  441 HRQPHPSV-----NKRTKQVLELLHMDLCGPMENTSLGGSRYFMTIVDDHSRKIFIYFLEKKSQALECFEDFKKEAENQMERKIKAIRTDNGKEFVNKEFSAFLRDSGIHHQTTIPHTPQQNGLAERMNRTIVERARCLLAESELPTT--FWAEASSTAVYLINRSPARAIQHRTPEEIWSGEKPKLQHLRVFGCEAMVHVPKECRRKWDMKSDKCIFLGYLEDGNGYRLYHESSQKIIKARDVVFIENIQRKRGASLKQTATKGIMVCEETLNHNPNEPAELSDDSSNSLEFWDADDEQEEPLPSSGETSSTEEQEQATEPEETTLRRSTRK-----PAPRNFKDYVTYKAMVIG-----------PDDPITLQEALESEACDSWQQAMRNEYDALLENKTWDLVDLPPGRKPLKCKWVFKTKRDSNNDVERYKARLVVKGFSQVKGLDYEETYSPVVRYASIRILLALAAKLDLEVDHLD 899          
BLAST of mRNA_H-paniculata_contig30700.8323.1 vs. uniprot
Match: Q7XRW0_ORYSJ (OSJNBb0058J09.8 protein n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q7XRW0_ORYSJ)

HSP 1 Score: 124 bits (311), Expect = 3.940e-26
Identity = 132/505 (26.14%), Postives = 215/505 (42.57%), Query Frame = 0
Query:   38 GTMCKITNGTFVPVAGWGRLVLLVSQPGGKSRVAKLNRVAHVPELGRNLISTRRATDTNRSSSIGLGRRRALSSTMLHCQGSPTVVPKKT-DKRTIWAAERLYVDLGGPTRVTSLGGSSYVMTIVDDYSQFQAIESIKKKSDATAAFQSYIAEYITPKEFKIGAIRTDNSGTF-DGDFYLEPDEHGLIHELTPPDTPQYNRVAERRLGLLREKTIALMQDQTEGGSEKLWAEAMNYACDITNMSCTHQMEHGATRRKVHHAGYFPQPLERNCPRSQYQDSIDRETSERVMASRECGGLAPEIGGGDDKAIVWTPRLDSSGQVELETTLTMQPHQE--DQPLQ--------PEEXXXXXXXXKQD----RPGPALRQLTDHFTGQQPSVALAMPEELRGDLPVEPKNHREAQASPEWEHWQRAEEVEMQDLIDIGVWTQVKLPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVTNGNRQIKGIHFQEVSFPAPAAASTKMMLSLAA 526
            G+   + NG+   V G G + L  +      ++ +L  V HVP + RNL+S  R T       +     + + S   +  G  T  P K  ++R +   E L+  L     V + GG  Y MT +DD ++F  +  +K K +A   F+ Y AE     + KI  +R+D  G F   +F L  +EHG+IHE TPP +P+ N +AER+   L +   A++   T G  +  W EA+  +  + N                       +   RN  ++ Y+  I R+T   + A     G +       D  +     ++S   +  E+   M+      +QP +        PE+         ++     P  + RQ T    G   +V L         +   PK+  EA ASP+ ++W+ A   EM  ++  G W   + P     V    ++K+K+  DG +EKYK RLV  G  Q +G  F +   P     + +++LSLAA
Sbjct:  311 GSTVLMGNGSHASVHGVGTVDLKFTS----GKIVQLKNVQHVPSIDRNLVSGSRLTRDGFK--LVFESNKVVVSKHGYFIGKATRKPHKAAEERNLAPLELLHSYLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLLKMKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGKFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLD--TAGLPKAWWGEALLTSNHVLN-----------------------RVPNRNKDKTPYEIWIGRKTITFLFAHMGVLGESQFKSEVPDMHVGTI--MESRDAIFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYL---------VDDTPKSISEAYASPDADYWKEAVRSEMDSIVANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAA 773          
BLAST of mRNA_H-paniculata_contig30700.8323.1 vs. uniprot
Match: A0A151S0H0_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151S0H0_CAJCA)

HSP 1 Score: 121 bits (303), Expect = 3.530e-25
Identity = 111/439 (25.28%), Postives = 193/439 (43.96%), Query Frame = 0
Query:  136 ERLYVDLGGPTRVTSLGGSSYVMTIVDDYSQFQAIESIKKKSDATAAFQSYIAEYITPKEFKIGAIRTDNSGTF-DGDFYLEPDEHGLIHELTPPDTPQYNRVAERRLGLLREKTIALMQDQTEGGSEKLWAEAMNYACDITNMSCTHQMEHGATRRKV--------HHAGYFPQPLERNCPRSQYQDSIDRETSERVMASRECGG---LAPE----IGGGD---DKAIVWTPRLDSSGQV------------ELETTLTMQPHQEDQPLQPEEXXXXXXXXKQDRPGPALRQLTDHFTGQQPSVALAMPEELRGDL-------PVEPKNHREAQASPEWEHWQRAEEVEMQDLIDIGVWTQVKLPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVTNGNRQIKGIHFQEVSFPAPAAASTKMMLSLAAIQDWELRHID 536
            E +Y D+ GP +  SLGG+ Y +T +DD+S+   +  IK K D  + F+ +        +  +  +RTD  G +   +F    ++ G++HE+TPP TPQ+N  AER+   L     ++++  ++G  + LW EA++ A  I N S T +++ G T  ++         H   F     R+ P    +   D+     ++     GG   L P+    +   D   D+A +W    DS G+             +L  T T++P +  +  Q                    ++L D+    + +V         GDL        +EP +  EA   P+W     A + E++ +     W  V LP  K  +    +YK K   +G+V KYK RLV  G  Q  GI + +V  P     + +++++LA+++ W +  +D
Sbjct:  472 EVVYSDVCGPLQTESLGGNKYFVTFIDDFSRKVWVYLIKNKGDVFSTFKKFKCLAEKQCDCSVKILRTDGGGEYVSAEFTSFCEDEGIVHEVTPPYTPQHNGTAERKNRTLMNMVRSMLK--SKGLPKYLWGEAVSTAAYILNRSPTKRLQ-GVTPEEIWSGHKPDTSHFRSFGSLCYRHVPNQLRRKLEDKGQQMILVGYHATGGYKFLDPKSRQIVISRDVIIDEASMWKDETDSKGKTARMLVDFESETTDLHPTATIEPRRSQRTRQ------------------IPQRLHDYDIFSESAV------NSEGDLVHLALFSEIEPVSFEEAMDDPKWIE---AMKDELRSIEKNKTWELVSLPLQKKSIDVKWVYKVKEKPNGEVAKYKARLVAKGFLQKAGIDYGDVFAPVARIETVRLVVALASLKGWPMYQLD 880          
BLAST of mRNA_H-paniculata_contig30700.8323.1 vs. uniprot
Match: A0A151TIH6_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151TIH6_CAJCA)

HSP 1 Score: 120 bits (301), Expect = 7.160e-25
Identity = 114/423 (26.95%), Postives = 195/423 (46.10%), Query Frame = 0
Query:  138 LYVDLGGPTRVTSLGGSSYVMTIVDDYSQFQAIESIKKKSDATAAFQSYIAEYITPKEFKIGAIRTDNSGTF-DGDFYLEPDEHGLIHELTPPDTPQYNRVAERRLGLLREKTIALMQDQTEGGSEKLWAEAMNYACDITNMSCTHQMEH-------GATRRKVHHAGYFPQPLERNCPRSQYQDSIDRETSERVMASRECGGLAPEIGGGDDKAIVWTPRLD-------SSGQVELETTLTMQPHQEDQPLQPE---EXXXXXXXXKQDRPGPALRQLTDHFTGQQ--PSVALAMPEELRGDLP----VEPKNHREAQASPEWEHWQRAEEVEMQDLIDIGVWTQVKLPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVTNGNRQIKGIHFQEVSFPAPAAASTKMMLSLAAIQDWELRHID 536
            +Y D+ GP    SLGG+ Y ++ VDD S+   +  IK KSD  + F+ + A      E  I  +RTD  G F  G+F     EHG++HE+T P TPQ+N +AERR   +     ++++++    S   W EA   A  + N   T +++          ++  V H   F     R+ P  Q +  +D ++   +       G + ++     K ++++  +        S  Q ++ET   +Q   E+     E   E         ++RP    +      +  Q  P  A+++  +L   L     VEP +  EA  S EW   + A E E++ +     W  V+LP+NK  +    ++K K+  DG V K+K RLV  G  Q +GI + EV  P     + +++++LA+ ++W+L  +D
Sbjct:  500 VYSDVCGPIDTPSLGGNRYFVSFVDDLSRKVWLYLIKAKSDVFSIFKEFKALVEKQSEKCIKILRTDGGGEFTSGEFEGFCKEHGIVHEVTAPYTPQHNGIAERRNRTILNMVRSMLKEKNLPHS--FWGEAAMTAVYVLNRCPTKRLDSMVPEEAWSGSKPSVKHFRIFGSLCYRHVP-DQRRKKLDDKSEPMIFVGYNSTG-SYKLYNPKTKQVLFSRDVYFDESNSWSESQSKIETVSKLQFDWEENNSIGETTQETMNDVCRTVENRPT-RNKNFPSRLSDYQVYPDNAISVDGDLVQHLALMADVEPISLDEAITSKEW---RSAMEEELRSIEKNHTWEMVELPQNKTPIDVKWVFKIKLKPDGSVAKHKARLVAKGFMQREGIDYSEVFAPVARLETVRLIVALASWRNWKLWQLD 914          
BLAST of mRNA_H-paniculata_contig30700.8323.1 vs. uniprot
Match: A0A151QNH5_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Cajanus cajan TaxID=3821 RepID=A0A151QNH5_CAJCA)

HSP 1 Score: 119 bits (298), Expect = 1.710e-24
Identity = 116/427 (27.17%), Postives = 198/427 (46.37%), Query Frame = 0
Query:  138 LYVDLGGPTRVTSLGGSSYVMTIVDDYSQFQAIESIKKKSDATAAFQSY--IAEYITPKEFKIGAIRTDNSGTF-DGDFYLEPDEHGLIHELTPPDTPQYNRVAERRLGLLREKTIALMQDQTEGGSEKLWAEAMNYACDITNMSCTHQMEH-------GATRRKVHHAGYFPQPLERNCPRSQYQDSIDRETSERVMASRECGGLAPEIGGGDDKAIVWTPRL---DSSGQVELETTLTMQP----HQEDQPLQPEEXXXXXXXXKQ---DRPGPALRQLTDHFTGQQPSVALAMPEELRGDL--------PVEPKNHREAQASPEWEHWQRAEEVEMQDLIDIGVWTQVKLPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVTNGNRQIKGIHFQEVSFPAPAAASTKMMLSLAAIQDWELRHID 536
            +Y D+ GP    SLGG+ Y ++ VDD S+   +  IK KSD  + F+ +  + E  + K  KI  +RTD  G F  G+F     EHG++HE+T P TPQ+N +AERR   +     ++++++    S   W EA   A  + N   T ++           ++  V H   F     R+ P  Q +  +D ++   +       G + ++    ++ ++++  +   +SS   E ++T  + P      +D+ L  E          Q   DRP   +R      +  Q     A+ EE  GDL         +EP    EA +    E W+ A E E++ +     W  V LP+NK  ++   ++K K   DG + K+K RLV  G  Q +GI + EV  P     + +++++LA+ ++W+L  +D
Sbjct:  523 VYSDVCGPIDTPSLGGNRYFVSFVDDLSRKAWLYLIKAKSDVFSIFKDFKALVEKQSGKCIKI--LRTDGGGEFTSGEFEGFCKEHGIVHEVTAPYTPQHNGIAERRNRTILNMVRSMLKEKNLPHS--FWGEAAMTAVYVLNRCPTKRLGSMVPEEAWSGSKPSVKHLRIFGSLCYRHVP-DQRRKKLDDKSEAMIFVGYNSTG-SYKLFNPKNQQVLFSRDVYFDESSSWAEFQSTSDIIPKFQFEWKDEDLVGETHQEVVNSELQMVADRPT-RVRSFPLRLSDYQIYHDSAITEE--GDLVQHMALLTDMEPITFEEAISK---EVWRSAMEEELKSIEKNDTWEMVNLPQNKKAIAVKWVFKTKFKSDGSIAKHKARLVAKGFMQKEGIDYSEVFAPVARLETVRLIVALASWRNWKLWQLD 937          
BLAST of mRNA_H-paniculata_contig30700.8323.1 vs. uniprot
Match: A0A438GDP4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GDP4_VITVI)

HSP 1 Score: 118 bits (295), Expect = 3.660e-24
Identity = 152/575 (26.43%), Postives = 228/575 (39.65%), Query Frame = 0
Query:    3 LAVTGEKEHWNSDTGAIDHMTSDETAFGDYTPALPGTMCKITNGTFVPVAGWGRLVLLVSQPGGKSRVAKLNRVAHVPELGRNLISTRRATD--------------TNRSSSIGLGRRRA-----------LSSTMLH---------CQGSPTVVPKKTDKRTIWA---AERL---YVDLGGPTRVTSLGGSSYVMTIVDDYSQFQAIESIKKKSDATAAFQSYIAEYITPKEFKIGAIRTDNSGTF-DGDFYLEPDEHGLIHELTPPDTPQYNRVAERRLGLLREKTIALMQDQTEGGSEKLWAEAMNYACDITNMSCTHQMEHGATRRKVHHAGYFPQPLERNCPRSQYQDSIDRETSERVMASRECGGLAPEIGGGDDKAIVWTPRLDSSGQVELETTLTMQPHQEDQPLQPEEXXXXXXXXKQDRPGPALRQLTDHFTGQQPSVALAMPEELRGDLPVEPKNHREAQASPEWEHWQRAEEVEMQDLIDIGVWTQVKLPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVTNGNRQIKGIHFQEVSFPAPAAASTKMMLSLAAIQDWELRHID 536
            LAV    + W  D+GA  H T       +Y     G +  + NG+ + V G G +   +S P G   V  L +V H+P+L RNLIS  +  D               + S+   L  RR            LS   L          C+       KK     I     AE+L   + DL GP+ V SLGGS Y +T +DD S+   +  +K KSD    F+ + A   T    K+  +R+DN G + DG F       G+  E T P TPQ N VAER    L E+  ++      G  +  WA+A++ A  + N   +  ME       ++         +R+   S   + ID++ SE V    E      + GG +DK  V       + QV+L T +             E            R  P L  L     G                   EP+ + EA        W+ A + EM  L+    W   +LP  K  +    +Y+ K   DG  ++YK RLV  G +Q +GI + E+  P    ++ +++L + A ++  L  +D
Sbjct:  193 LAVDSPLDDWVLDSGASFHTTPHREIIQNYVAGDFGKV-YLANGSALDVVGLGDV--RISLPNGS--VWLLEKVRHIPDLRRNLISVGQLDDEGHAILFVWWYLEVADASTDTSLWHRRLGHMSEKGMKMLLSKGKLPELKSIDFDMCESCILGKQKKVSFLKIGRTPKAEKLELVHTDLWGPSPVASLGGSRYYITFIDDSSRKVWVYFLKNKSDVFVTFKKWKAMVETETGLKVKCLRSDNGGEYIDGGFSEYCAAQGIRMEKTIPGTPQQNGVAERMNKTLNERARSMRLHA--GLPKTFWADAVSTAAYLINRGPSVPMEFRLPEEVMY--------KDRSTVTSDVTE-IDQKKSEFVNLD-ELTESTVQKGGEEDKENV-------NSQVDLSTPIV------------EVRRSSRNTRPPQRYSPVLNYLLLTDGG-------------------EPECYDEALQDENSSKWELAMKDEMDSLLGNQTWQLTELPVGKKALHNKWVYRIKNEHDGS-KRYKARLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAAENLHLEQLD 711          
BLAST of mRNA_H-paniculata_contig30700.8323.1 vs. uniprot
Match: Q259D6_ORYSA (H0801D08.16 protein n=1 Tax=Oryza sativa TaxID=4530 RepID=Q259D6_ORYSA)

HSP 1 Score: 117 bits (294), Expect = 4.970e-24
Identity = 106/403 (26.30%), Postives = 171/403 (42.43%), Query Frame = 0
Query:  125 KKTDKRTIWAAERLYVDLGGPTRVTSLGGSSYVMTIVDDYSQFQAIESIKKKSDATAAFQSYIAEYITPKEFKIGAIRTDNSGTF-DGDFYLEPDEHGLIHELTPPDTPQYNRVAERRLGLLREKTIALMQDQTEGGSEKLWAEAMNYACDITNMSCTHQMEHGATRRKVHHAGYFPQPLERNCPRSQYQDSIDRETSERVMASRECGGLAPEIGGGDDKAIVWTPRLDSSGQVELETTLTMQPHQEDQPLQPEEXXXXXXXXKQDRPGPALRQLTDHFTGQQPSVALAMPEELRGDLPVEPKNHREAQASPEWEHWQRAEEVEMQDLIDIGVWTQVKLPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVTNGNRQIKGIHFQEVSFPAPAAASTKMMLSLAA 526
            K  ++R +   E L+ +L     V   GG  Y MT++DD ++F  +  +K K +A   F+ Y AE     + KI  +R+D+ G F   +F L  +EHG+IHE TPP +P+ N +AER+  +L +   A++   T G  +  W EA+  +  + N                       +   RN  ++ Y+  I R+ S   + +                   W      S Q       ++ P        PE+          + P  + RQ T    G   +V L         +   PK+  EA ASP+ ++W+ A   EM  +I  G W   + P     V    ++K+K+  DG +EKY  RLV  G  Q +G +F +   P     + +++LSLAA
Sbjct:  363 KAAEERNLAPLELLHSNLCEMNGVLMNGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQFDRKIKRLRSDHGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRILTDLVNAMLD--TAGLPKAWWGEALLTSNHVLN-----------------------RVPNRNKDKTPYEIWIGRKPSLSYLRT-------------------WGDTHSGSSQPSEIIPSSITP--------PEQTEHTPEEDVGEAPRRSKRQKTAKSIGDDFTVYL---------VDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKRVFKKKLRPDGTIEKYNARLVAKGYTQKEGEYFFDTYLPIARLTTIRVLLSLAA 704          
BLAST of mRNA_H-paniculata_contig30700.8323.1 vs. uniprot
Match: Q10PX3_ORYSJ (Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q10PX3_ORYSJ)

HSP 1 Score: 117 bits (294), Expect = 5.320e-24
Identity = 116/445 (26.07%), Postives = 186/445 (41.80%), Query Frame = 0
Query:  125 KKTDKRTIWAAERLYVDLGGPTRVTSLGGSSYVMTIVDDYSQFQAIESIKKKSDATAAFQSYIAEYITPKEFKIGAIRTDNSGT-FDGDFYLEPDEHGLIHELTPPDTPQYNRVAERRLGLLREKTIALMQDQTEGGSEKLWAEAMNYACDITNMSCTHQMEHGAT------RRKVHHAGYFPQ------------------PLERNCPRSQY------------QDSIDRETSERVMASRECGGLAPEIGGGDDKAIVWTPRLDSSGQVELETTLTMQPHQEDQPLQ-----PEEXXXXXXXXKQDRPGPALRQLTDHFTGQQPSVALAMPEELRGDLPVE-PKNHREAQASPEWEHWQRAEEVEMQDLIDIGVWTQVKLPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVTNGNRQIKGIHFQEVSFPAPAAASTKMMLSLAA 526
            K ++ R +   E ++ DL     V + GG  Y MT++DD ++F  +  +K K +A   F+ Y AE     E KI  +R+D  G  F  +F    +E G+IHE+TPP +PQ N VAER+   L E   A++   T G S++ W EA+  AC + N      M+H          RK  +  Y                     P   +C    Y               +    +  +  SR+      E       ++ +TP   S          T+ PH+   P++     PEE              P    + D    ++  VA +  ++    L  + P+   EA +SP+ ++W+ A   EM  ++  G W  V+ P     V    ++K+K+  DG +EKYK RLV  G  Q +G  F +   P     + +++L+LAA
Sbjct:  463 KASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEVENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLD--TAGLSKEWWGEAVLTACHVLNKI---PMKHKEVTPFEEWERKKLNLSYLRTWGCLAKVNVPIVKKRKLGPKTVDCVFLGYAIHSVGYRFLIVNSGVPDMHAGTIFESRDATFFENEF------SMKYTPSTSSKE--------TVMPHEHFAPIEHNDETPEE-------------NPEEDNIVDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYSSPDADYWKEAVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLALAA 875          
BLAST of mRNA_H-paniculata_contig30700.8323.1 vs. uniprot
Match: A0A445IW95_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445IW95_GLYSO)

HSP 1 Score: 117 bits (294), Expect = 6.370e-24
Identity = 115/455 (25.27%), Postives = 204/455 (44.84%), Query Frame = 0
Query:  114 LHCQGSPTVVPKKTDKRTIWAAERLYVDLGGPTRVTSLGGSSYVMTIVDDYSQFQAIESIKKKSDATAAFQSY--IAEYITPKEFKIGAIRTDNSGTFDGDFYLE-PDEHGLIHELTPPDTPQYNRVAERRLGLLREKTIA-LMQDQTEGGS--EKLWAEAMNYACDITNMSCTHQMEHGAT--------RRKVHHAGYFPQPLERNCPRSQYQDSIDRETSERVMASRECGG-------------LAPEIGGGDDKAIVWTPRLDSSGQVELETTLTMQPHQEDQPLQPEEXXXXXXXXKQDRPGPALRQLTDHFTGQQPS-----VALAMPEELRGDLPVEPKNHREAQASPEWEHWQRAEEVEMQDLIDIGVWTQVKLPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVTNGNRQIKGIHFQEVSFPAPAAASTKMMLSLAAIQDWELRHID 536
            L C+ S +   +    R     E +Y D+ GP +  SLGG+ Y ++ +D+ ++   +  I++KSD    F+ +  +AE  +    KI  +RTD  G +    + E  D+ G+IHE+TPP TPQ+N  AER+      +TI  +++   +G S  + LW EA++ A  I NMS + ++E G T        +  V H   F     R+ P  Q +  +D +  + ++      G             ++ ++   + ++  W    +  G      ++ ++  +E+               +++ P PA  Q  +  +    S     V  A+  E       EP N  +A      + W  A   E++ +    VW  V  PK+K  +    IYK K   +GKV KYK RLV  G  Q  GI ++EV  P     + + ++++A++++W +  +D
Sbjct: 1204 LQCKQSRSTFKQNVPIRAKEKLEVIYSDVCGPMQTESLGGNKYFISFIDELTRKVWVYLIRRKSDVFEVFEKFKNMAEKQSGSLIKI--LRTDGGGEYVSTEFQEFCDQEGIIHEVTPPYTPQHNGAAERK-----NRTIMNMVRSMLKGKSLPKYLWGEAVSTAVFILNMSPSKRLE-GITPEEAWSGAKPNVSHFRIFGSLCFRHIP-DQLRRKLDDKGEQMILLGYHSTGGYKLFDPKSKKIIISRDVVFDESRSWNWEQNTEMKG-----PSIMIRSEEEETSEGNGNTTQREVRRQRNAPKPARFQGFEMLSDADVSADGNLVHFALFSE------AEPINFEDAMTD---QRWVEAMTEELKSIEKNQVWELVSQPKSKKPIDVKWIYKIKTNPEGKVVKYKARLVAKGFLQKAGIDYREVFAPVARIETIRTVVAIASLKNWTMHQLD 1635          
BLAST of mRNA_H-paniculata_contig30700.8323.1 vs. uniprot
Match: A0A8J5YBS1_9ROSI (Uncharacterized protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YBS1_9ROSI)

HSP 1 Score: 116 bits (291), Expect = 9.880e-24
Identity = 105/405 (25.93%), Postives = 175/405 (43.21%), Query Frame = 0
Query:  140 VDLGGPTRVTSLGGSSYVMTIVDDYSQFQAIESIKKKSDATAAFQSYIAEYITPKEFKIGAIRTDNSGTFDGDFYLEPD----EHGLIHELTPPDTPQYNRVAERRLGLLREKTIALMQDQTEGGSEKLWAEAMNYACDITNMSCTHQMEHGATRRKVHHAGYFPQPLERNCPRSQYQDSIDRETSERVMASRECGGLAPEIGGGDDKAIVWTPRLDSSGQVELETTLTMQPHQEDQPLQPEEXXXXXXXXKQDRPGPALRQLTDHFTGQQPSVALAMPEELRGDLPV----EPKNHREAQASPEWEHWQRAEEVEMQDLIDIGVWTQVKLPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVTNGNRQIKGIHFQEVSFPAPAAASTKMMLSLAAIQDWELRHID 536
            +D+ GP    + G   Y +T +DD+S++  +  ++ KS+A   F+ +  E        I  +R+D  G +     LE D    E G++ +LTPP TPQ+N V+ERR   L +   ++M       S   W  A+  A    N     ++   + ++  +      +P          +  +  +TS ++    E  G+  E          +  R  S  ++ELE     Q   E +  Q +               P  R L +    ++    +       GD+ +    EP+ ++EA ASPE E W  A   EM  + +  VWT V  PK    +    ++K+KI  DG V+ YK RLV  G RQI G+++ E   P     S ++ L++AA  D+E+  +D
Sbjct:  175 LDVCGPINTQARGRFHYFITFIDDFSRYGYVYLMRHKSEALEKFKEFKNEVQNQLGKTIKTLRSDRGGEY---LSLEFDDLLKECGIVSQLTPPGTPQWNGVSERRNRTLLDMVQSMMSHVDLPTS--FWGHALEIAIFTLN-----RVPSKSVQKMPYEMWTGKRPTMSFMKIWGCEAYVKCQTSTKLEPKSESTGVFLER--------EFVSRKGSGRKIELEEIRESQDTTEPEIKQQQIPQEIEEQVTTVETQPPRRSLRERHAPERYGFLIT----THGDILLIDQDEPRTYQEAVASPESEKWLEALRSEMDSMYENQVWTLVDPPKGVKPIGCKWVFKKKIDMDGNVQTYKGRLVAKGFRQIHGVNYDETFSPVAMFKSIRISLAIAAFHDYEIWQMD 557          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30700.8323.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0J7NHJ8_LASNI2.100e-2726.35Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=677... [more]
Q7XRW0_ORYSJ3.940e-2626.14OSJNBb0058J09.8 protein n=2 Tax=Oryza sativa subsp... [more]
A0A151S0H0_CAJCA3.530e-2525.28Retrovirus-related Pol polyprotein from transposon... [more]
A0A151TIH6_CAJCA7.160e-2526.95Retrovirus-related Pol polyprotein from transposon... [more]
A0A151QNH5_CAJCA1.710e-2427.17Retrovirus-related Pol polyprotein from transposon... [more]
A0A438GDP4_VITVI3.660e-2426.43Retrovirus-related Pol polyprotein from transposon... [more]
Q259D6_ORYSA4.970e-2426.30H0801D08.16 protein n=1 Tax=Oryza sativa TaxID=453... [more]
Q10PX3_ORYSJ5.320e-2426.07Retrotransposon protein, putative, Ty1-copia subcl... [more]
A0A445IW95_GLYSO6.370e-2425.27Retrovirus-related Pol polyprotein from transposon... [more]
A0A8J5YBS1_9ROSI9.880e-2425.93Uncharacterized protein n=1 Tax=Gossypium anomalum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 456..536
e-value: 2.9E-13
score: 50.1
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 125..303
e-value: 1.4E-13
score: 52.5
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 136..247
e-value: 2.8E-8
score: 34.0
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 120..310
score: 15.597
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 368..536
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 368..536
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 132..282

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig30700contigH-paniculata_contig30700:797..2851 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig30700.8323.1mRNA_H-paniculata_contig30700.8323.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig30700 797..2851 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig30700.8323.1 ID=prot_H-paniculata_contig30700.8323.1|Name=mRNA_H-paniculata_contig30700.8323.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=536bp
NNLAVTGEKEHWNSDTGAIDHMTSDETAFGDYTPALPGTMCKITNGTFVP
VAGWGRLVLLVSQPGGKSRVAKLNRVAHVPELGRNLISTRRATDTNRSSS
IGLGRRRALSSTMLHCQGSPTVVPKKTDKRTIWAAERLYVDLGGPTRVTS
LGGSSYVMTIVDDYSQFQAIESIKKKSDATAAFQSYIAEYITPKEFKIGA
IRTDNSGTFDGDFYLEPDEHGLIHELTPPDTPQYNRVAERRLGLLREKTI
ALMQDQTEGGSEKLWAEAMNYACDITNMSCTHQMEHGATRRKVHHAGYFP
QPLERNCPRSQYQDSIDRETSERVMASRECGGLAPEIGGGDDKAIVWTPR
LDSSGQVELETTLTMQPHQEDQPLQPEENEEERQQEKQDRPGPALRQLTD
HFTGQQPSVALAMPEELRGDLPVEPKNHREAQASPEWEHWQRAEEVEMQD
LIDIGVWTQVKLPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVTNGNRQI
KGIHFQEVSFPAPAAASTKMMLSLAAIQDWELRHID
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf