mRNA_H-paniculata_contig30700.8323.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig30700.8323.1 vs. uniprot
Match: A0A0J7NHJ8_LASNI (Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7NHJ8_LASNI) HSP 1 Score: 128 bits (321), Expect = 2.100e-27 Identity = 127/482 (26.35%), Postives = 201/482 (41.70%), Query Frame = 1
Query: 343 HCQGSPTVVPKKTDKRTIWAAERLYVDLGGPTRVTSLGGSSYVMTIVDDYSQFQAIESIKKKSDATAAFQSYIAEYITPKEFKIGAIRTDNSGTF-DGDFYLEPDEHGLIHELTPPDTPQYNRVAERRLGLLREKTIALMQDQTEGGSEKLWAEAMNYACDITNMSCTHQMEH-------GATRRKVHHAGYFPQPLERNCP---RSQYQDSIDR-----------------ETSERVMASRECGGLA--------------------------------PEIGGGDDKAIVWTPRLDSSGQVELETTLTMQPHQEDQPLQPEEXXXXXXXXKQDRPGPALRQLTDHFTGQQPSVALAMPEELRGDLPVEPKNHREAQASPEWEHWQRAEEVEMQDLIDIGVWTQVKLPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVTNGNRQIKGIHFQEVSFPAPAAASTKMMLSLAAIQDWELRHID 1608
H Q P+V +KRT E L++DL GP TSLGGS Y MTIVDD+S+ I ++KKS A F+ + E E KI AIRTDN F + +F + G+ H+ T P TPQ N +AER + E+ L+ + + WAEA + A + N S ++H + K+ H F + P R ++ D+ E+S++++ +R+ + E+ ++ + D + + T +++Q +PEE K PA R D+ T + + P +P +EA S + WQ+A E L++ W V LP + + ++K K + VE+YK RLV G Q+KG+ ++E P AS +++L+LAA D E+ H+D
Sbjct: 441 HRQPHPSV-----NKRTKQVLELLHMDLCGPMENTSLGGSRYFMTIVDDHSRKIFIYFLEKKSQALECFEDFKKEAENQMERKIKAIRTDNGKEFVNKEFSAFLRDSGIHHQTTIPHTPQQNGLAERMNRTIVERARCLLAESELPTT--FWAEASSTAVYLINRSPARAIQHRTPEEIWSGEKPKLQHLRVFGCEAMVHVPKECRRKWDMKSDKCIFLGYLEDGNGYRLYHESSQKIIKARDVVFIENIQRKRGASLKQTATKGIMVCEETLNHNPNEPAELSDDSSNSLEFWDADDEQEEPLPSSGETSSTEEQEQATEPEETTLRRSTRK-----PAPRNFKDYVTYKAMVIG-----------PDDPITLQEALESEACDSWQQAMRNEYDALLENKTWDLVDLPPGRKPLKCKWVFKTKRDSNNDVERYKARLVVKGFSQVKGLDYEETYSPVVRYASIRILLALAAKLDLEVDHLD 899
BLAST of mRNA_H-paniculata_contig30700.8323.1 vs. uniprot
Match: Q7XRW0_ORYSJ (OSJNBb0058J09.8 protein n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q7XRW0_ORYSJ) HSP 1 Score: 124 bits (311), Expect = 3.940e-26 Identity = 132/505 (26.14%), Postives = 215/505 (42.57%), Query Frame = 1
Query: 112 GTMCKITNGTFVPVAGWGRLVLLVSQPGGKSRVAKLNRVAHVPELGRNLISTRRATDTNRSSSIGLGRRRALSSTMLHCQGSPTVVPKKT-DKRTIWAAERLYVDLGGPTRVTSLGGSSYVMTIVDDYSQFQAIESIKKKSDATAAFQSYIAEYITPKEFKIGAIRTDNSGTF-DGDFYLEPDEHGLIHELTPPDTPQYNRVAERRLGLLREKTIALMQDQTEGGSEKLWAEAMNYACDITNMSCTHQMEHGATRRKVHHAGYFPQPLERNCPRSQYQDSIDRETSERVMASRECGGLAPEIGGGDDKAIVWTPRLDSSGQVELETTLTMQPHQE--DQPLQ--------PEEXXXXXXXXKQD----RPGPALRQLTDHFTGQQPSVALAMPEELRGDLPVEPKNHREAQASPEWEHWQRAEEVEMQDLIDIGVWTQVKLPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVTNGNRQIKGIHFQEVSFPAPAAASTKMMLSLAA 1578
G+ + NG+ V G G + L + ++ +L V HVP + RNL+S R T + + + S + G T P K ++R + E L+ L V + GG Y MT +DD ++F + +K K +A F+ Y AE + KI +R+D G F +F L +EHG+IHE TPP +P+ N +AER+ L + A++ T G + W EA+ + + N + RN ++ Y+ I R+T + A G + D + ++S + E+ M+ +QP + PE+ ++ P + RQ T G +V L + PK+ EA ASP+ ++W+ A EM ++ G W + P V ++K+K+ DG +EKYK RLV G Q +G F + P + +++LSLAA
Sbjct: 311 GSTVLMGNGSHASVHGVGTVDLKFTS----GKIVQLKNVQHVPSIDRNLVSGSRLTRDGFK--LVFESNKVVVSKHGYFIGKATRKPHKAAEERNLAPLELLHSYLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLLKMKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGKFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLD--TAGLPKAWWGEALLTSNHVLN-----------------------RVPNRNKDKTPYEIWIGRKTITFLFAHMGVLGESQFKSEVPDMHVGTI--MESRDAIFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYL---------VDDTPKSISEAYASPDADYWKEAVRSEMDSIVANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAA 773
BLAST of mRNA_H-paniculata_contig30700.8323.1 vs. uniprot
Match: A0A151S0H0_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151S0H0_CAJCA) HSP 1 Score: 121 bits (303), Expect = 3.530e-25 Identity = 111/439 (25.28%), Postives = 193/439 (43.96%), Query Frame = 1
Query: 406 ERLYVDLGGPTRVTSLGGSSYVMTIVDDYSQFQAIESIKKKSDATAAFQSYIAEYITPKEFKIGAIRTDNSGTF-DGDFYLEPDEHGLIHELTPPDTPQYNRVAERRLGLLREKTIALMQDQTEGGSEKLWAEAMNYACDITNMSCTHQMEHGATRRKV--------HHAGYFPQPLERNCPRSQYQDSIDRETSERVMASRECGG---LAPE----IGGGD---DKAIVWTPRLDSSGQV------------ELETTLTMQPHQEDQPLQPEEXXXXXXXXKQDRPGPALRQLTDHFTGQQPSVALAMPEELRGDL-------PVEPKNHREAQASPEWEHWQRAEEVEMQDLIDIGVWTQVKLPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVTNGNRQIKGIHFQEVSFPAPAAASTKMMLSLAAIQDWELRHID 1608
E +Y D+ GP + SLGG+ Y +T +DD+S+ + IK K D + F+ + + + +RTD G + +F ++ G++HE+TPP TPQ+N AER+ L ++++ ++G + LW EA++ A I N S T +++ G T ++ H F R+ P + D+ ++ GG L P+ + D D+A +W DS G+ +L T T++P + + Q ++L D+ + +V GDL +EP + EA P+W A + E++ + W V LP K + +YK K +G+V KYK RLV G Q GI + +V P + +++++LA+++ W + +D
Sbjct: 472 EVVYSDVCGPLQTESLGGNKYFVTFIDDFSRKVWVYLIKNKGDVFSTFKKFKCLAEKQCDCSVKILRTDGGGEYVSAEFTSFCEDEGIVHEVTPPYTPQHNGTAERKNRTLMNMVRSMLK--SKGLPKYLWGEAVSTAAYILNRSPTKRLQ-GVTPEEIWSGHKPDTSHFRSFGSLCYRHVPNQLRRKLEDKGQQMILVGYHATGGYKFLDPKSRQIVISRDVIIDEASMWKDETDSKGKTARMLVDFESETTDLHPTATIEPRRSQRTRQ------------------IPQRLHDYDIFSESAV------NSEGDLVHLALFSEIEPVSFEEAMDDPKWIE---AMKDELRSIEKNKTWELVSLPLQKKSIDVKWVYKVKEKPNGEVAKYKARLVAKGFLQKAGIDYGDVFAPVARIETVRLVVALASLKGWPMYQLD 880
BLAST of mRNA_H-paniculata_contig30700.8323.1 vs. uniprot
Match: A0A151TIH6_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151TIH6_CAJCA) HSP 1 Score: 120 bits (301), Expect = 7.160e-25 Identity = 114/423 (26.95%), Postives = 195/423 (46.10%), Query Frame = 1
Query: 412 LYVDLGGPTRVTSLGGSSYVMTIVDDYSQFQAIESIKKKSDATAAFQSYIAEYITPKEFKIGAIRTDNSGTF-DGDFYLEPDEHGLIHELTPPDTPQYNRVAERRLGLLREKTIALMQDQTEGGSEKLWAEAMNYACDITNMSCTHQMEH-------GATRRKVHHAGYFPQPLERNCPRSQYQDSIDRETSERVMASRECGGLAPEIGGGDDKAIVWTPRLD-------SSGQVELETTLTMQPHQEDQPLQPE---EXXXXXXXXKQDRPGPALRQLTDHFTGQQ--PSVALAMPEELRGDLP----VEPKNHREAQASPEWEHWQRAEEVEMQDLIDIGVWTQVKLPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVTNGNRQIKGIHFQEVSFPAPAAASTKMMLSLAAIQDWELRHID 1608
+Y D+ GP SLGG+ Y ++ VDD S+ + IK KSD + F+ + A E I +RTD G F G+F EHG++HE+T P TPQ+N +AERR + ++++++ S W EA A + N T +++ ++ V H F R+ P Q + +D ++ + G + ++ K ++++ + S Q ++ET +Q E+ E E ++RP + + Q P A+++ +L L VEP + EA S EW + A E E++ + W V+LP+NK + ++K K+ DG V K+K RLV G Q +GI + EV P + +++++LA+ ++W+L +D
Sbjct: 500 VYSDVCGPIDTPSLGGNRYFVSFVDDLSRKVWLYLIKAKSDVFSIFKEFKALVEKQSEKCIKILRTDGGGEFTSGEFEGFCKEHGIVHEVTAPYTPQHNGIAERRNRTILNMVRSMLKEKNLPHS--FWGEAAMTAVYVLNRCPTKRLDSMVPEEAWSGSKPSVKHFRIFGSLCYRHVP-DQRRKKLDDKSEPMIFVGYNSTG-SYKLYNPKTKQVLFSRDVYFDESNSWSESQSKIETVSKLQFDWEENNSIGETTQETMNDVCRTVENRPT-RNKNFPSRLSDYQVYPDNAISVDGDLVQHLALMADVEPISLDEAITSKEW---RSAMEEELRSIEKNHTWEMVELPQNKTPIDVKWVFKIKLKPDGSVAKHKARLVAKGFMQREGIDYSEVFAPVARLETVRLIVALASWRNWKLWQLD 914
BLAST of mRNA_H-paniculata_contig30700.8323.1 vs. uniprot
Match: A0A151QNH5_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Cajanus cajan TaxID=3821 RepID=A0A151QNH5_CAJCA) HSP 1 Score: 119 bits (298), Expect = 1.710e-24 Identity = 116/427 (27.17%), Postives = 198/427 (46.37%), Query Frame = 1
Query: 412 LYVDLGGPTRVTSLGGSSYVMTIVDDYSQFQAIESIKKKSDATAAFQSY--IAEYITPKEFKIGAIRTDNSGTF-DGDFYLEPDEHGLIHELTPPDTPQYNRVAERRLGLLREKTIALMQDQTEGGSEKLWAEAMNYACDITNMSCTHQMEH-------GATRRKVHHAGYFPQPLERNCPRSQYQDSIDRETSERVMASRECGGLAPEIGGGDDKAIVWTPRL---DSSGQVELETTLTMQP----HQEDQPLQPEEXXXXXXXXKQ---DRPGPALRQLTDHFTGQQPSVALAMPEELRGDL--------PVEPKNHREAQASPEWEHWQRAEEVEMQDLIDIGVWTQVKLPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVTNGNRQIKGIHFQEVSFPAPAAASTKMMLSLAAIQDWELRHID 1608
+Y D+ GP SLGG+ Y ++ VDD S+ + IK KSD + F+ + + E + K KI +RTD G F G+F EHG++HE+T P TPQ+N +AERR + ++++++ S W EA A + N T ++ ++ V H F R+ P Q + +D ++ + G + ++ ++ ++++ + +SS E ++T + P +D+ L E Q DRP +R + Q A+ EE GDL +EP EA + E W+ A E E++ + W V LP+NK ++ ++K K DG + K+K RLV G Q +GI + EV P + +++++LA+ ++W+L +D
Sbjct: 523 VYSDVCGPIDTPSLGGNRYFVSFVDDLSRKAWLYLIKAKSDVFSIFKDFKALVEKQSGKCIKI--LRTDGGGEFTSGEFEGFCKEHGIVHEVTAPYTPQHNGIAERRNRTILNMVRSMLKEKNLPHS--FWGEAAMTAVYVLNRCPTKRLGSMVPEEAWSGSKPSVKHLRIFGSLCYRHVP-DQRRKKLDDKSEAMIFVGYNSTG-SYKLFNPKNQQVLFSRDVYFDESSSWAEFQSTSDIIPKFQFEWKDEDLVGETHQEVVNSELQMVADRPT-RVRSFPLRLSDYQIYHDSAITEE--GDLVQHMALLTDMEPITFEEAISK---EVWRSAMEEELKSIEKNDTWEMVNLPQNKKAIAVKWVFKTKFKSDGSIAKHKARLVAKGFMQKEGIDYSEVFAPVARLETVRLIVALASWRNWKLWQLD 937
BLAST of mRNA_H-paniculata_contig30700.8323.1 vs. uniprot
Match: A0A438GDP4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GDP4_VITVI) HSP 1 Score: 118 bits (295), Expect = 3.660e-24 Identity = 152/575 (26.43%), Postives = 228/575 (39.65%), Query Frame = 1
Query: 7 LAVTGEKEHWNSDTGAIDHMTSDETAFGDYTPALPGTMCKITNGTFVPVAGWGRLVLLVSQPGGKSRVAKLNRVAHVPELGRNLISTRRATD--------------TNRSSSIGLGRRRA-----------LSSTMLH---------CQGSPTVVPKKTDKRTIWA---AERL---YVDLGGPTRVTSLGGSSYVMTIVDDYSQFQAIESIKKKSDATAAFQSYIAEYITPKEFKIGAIRTDNSGTF-DGDFYLEPDEHGLIHELTPPDTPQYNRVAERRLGLLREKTIALMQDQTEGGSEKLWAEAMNYACDITNMSCTHQMEHGATRRKVHHAGYFPQPLERNCPRSQYQDSIDRETSERVMASRECGGLAPEIGGGDDKAIVWTPRLDSSGQVELETTLTMQPHQEDQPLQPEEXXXXXXXXKQDRPGPALRQLTDHFTGQQPSVALAMPEELRGDLPVEPKNHREAQASPEWEHWQRAEEVEMQDLIDIGVWTQVKLPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVTNGNRQIKGIHFQEVSFPAPAAASTKMMLSLAAIQDWELRHID 1608
LAV + W D+GA H T +Y G + + NG+ + V G G + +S P G V L +V H+P+L RNLIS + D + S+ L RR LS L C+ KK I AE+L + DL GP+ V SLGGS Y +T +DD S+ + +K KSD F+ + A T K+ +R+DN G + DG F G+ E T P TPQ N VAER L E+ ++ G + WA+A++ A + N + ME ++ +R+ S + ID++ SE V E + GG +DK V + QV+L T + E R P L L G EP+ + EA W+ A + EM L+ W +LP K + +Y+ K DG ++YK RLV G +Q +GI + E+ P ++ +++L + A ++ L +D
Sbjct: 193 LAVDSPLDDWVLDSGASFHTTPHREIIQNYVAGDFGKV-YLANGSALDVVGLGDV--RISLPNGS--VWLLEKVRHIPDLRRNLISVGQLDDEGHAILFVWWYLEVADASTDTSLWHRRLGHMSEKGMKMLLSKGKLPELKSIDFDMCESCILGKQKKVSFLKIGRTPKAEKLELVHTDLWGPSPVASLGGSRYYITFIDDSSRKVWVYFLKNKSDVFVTFKKWKAMVETETGLKVKCLRSDNGGEYIDGGFSEYCAAQGIRMEKTIPGTPQQNGVAERMNKTLNERARSMRLHA--GLPKTFWADAVSTAAYLINRGPSVPMEFRLPEEVMY--------KDRSTVTSDVTE-IDQKKSEFVNLD-ELTESTVQKGGEEDKENV-------NSQVDLSTPIV------------EVRRSSRNTRPPQRYSPVLNYLLLTDGG-------------------EPECYDEALQDENSSKWELAMKDEMDSLLGNQTWQLTELPVGKKALHNKWVYRIKNEHDGS-KRYKARLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAAENLHLEQLD 711
BLAST of mRNA_H-paniculata_contig30700.8323.1 vs. uniprot
Match: Q259D6_ORYSA (H0801D08.16 protein n=1 Tax=Oryza sativa TaxID=4530 RepID=Q259D6_ORYSA) HSP 1 Score: 117 bits (294), Expect = 4.970e-24 Identity = 106/403 (26.30%), Postives = 171/403 (42.43%), Query Frame = 1
Query: 373 KKTDKRTIWAAERLYVDLGGPTRVTSLGGSSYVMTIVDDYSQFQAIESIKKKSDATAAFQSYIAEYITPKEFKIGAIRTDNSGTF-DGDFYLEPDEHGLIHELTPPDTPQYNRVAERRLGLLREKTIALMQDQTEGGSEKLWAEAMNYACDITNMSCTHQMEHGATRRKVHHAGYFPQPLERNCPRSQYQDSIDRETSERVMASRECGGLAPEIGGGDDKAIVWTPRLDSSGQVELETTLTMQPHQEDQPLQPEEXXXXXXXXKQDRPGPALRQLTDHFTGQQPSVALAMPEELRGDLPVEPKNHREAQASPEWEHWQRAEEVEMQDLIDIGVWTQVKLPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVTNGNRQIKGIHFQEVSFPAPAAASTKMMLSLAA 1578
K ++R + E L+ +L V GG Y MT++DD ++F + +K K +A F+ Y AE + KI +R+D+ G F +F L +EHG+IHE TPP +P+ N +AER+ +L + A++ T G + W EA+ + + N + RN ++ Y+ I R+ S + + W S Q ++ P PE+ + P + RQ T G +V L + PK+ EA ASP+ ++W+ A EM +I G W + P V ++K+K+ DG +EKY RLV G Q +G +F + P + +++LSLAA
Sbjct: 363 KAAEERNLAPLELLHSNLCEMNGVLMNGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQFDRKIKRLRSDHGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRILTDLVNAMLD--TAGLPKAWWGEALLTSNHVLN-----------------------RVPNRNKDKTPYEIWIGRKPSLSYLRT-------------------WGDTHSGSSQPSEIIPSSITP--------PEQTEHTPEEDVGEAPRRSKRQKTAKSIGDDFTVYL---------VDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKRVFKKKLRPDGTIEKYNARLVAKGYTQKEGEYFFDTYLPIARLTTIRVLLSLAA 704
BLAST of mRNA_H-paniculata_contig30700.8323.1 vs. uniprot
Match: Q10PX3_ORYSJ (Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q10PX3_ORYSJ) HSP 1 Score: 117 bits (294), Expect = 5.320e-24 Identity = 116/445 (26.07%), Postives = 186/445 (41.80%), Query Frame = 1
Query: 373 KKTDKRTIWAAERLYVDLGGPTRVTSLGGSSYVMTIVDDYSQFQAIESIKKKSDATAAFQSYIAEYITPKEFKIGAIRTDNSGT-FDGDFYLEPDEHGLIHELTPPDTPQYNRVAERRLGLLREKTIALMQDQTEGGSEKLWAEAMNYACDITNMSCTHQMEHGAT------RRKVHHAGYFPQ------------------PLERNCPRSQY------------QDSIDRETSERVMASRECGGLAPEIGGGDDKAIVWTPRLDSSGQVELETTLTMQPHQEDQPLQ-----PEEXXXXXXXXKQDRPGPALRQLTDHFTGQQPSVALAMPEELRGDLPVE-PKNHREAQASPEWEHWQRAEEVEMQDLIDIGVWTQVKLPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVTNGNRQIKGIHFQEVSFPAPAAASTKMMLSLAA 1578
K ++ R + E ++ DL V + GG Y MT++DD ++F + +K K +A F+ Y AE E KI +R+D G F +F +E G+IHE+TPP +PQ N VAER+ L E A++ T G S++ W EA+ AC + N M+H RK + Y P +C Y + + + SR+ E ++ +TP S T+ PH+ P++ PEE P + D ++ VA + ++ L + P+ EA +SP+ ++W+ A EM ++ G W V+ P V ++K+K+ DG +EKYK RLV G Q +G F + P + +++L+LAA
Sbjct: 463 KASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEVENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLD--TAGLSKEWWGEAVLTACHVLNKI---PMKHKEVTPFEEWERKKLNLSYLRTWGCLAKVNVPIVKKRKLGPKTVDCVFLGYAIHSVGYRFLIVNSGVPDMHAGTIFESRDATFFENEF------SMKYTPSTSSKE--------TVMPHEHFAPIEHNDETPEE-------------NPEEDNIVDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYSSPDADYWKEAVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLALAA 875
BLAST of mRNA_H-paniculata_contig30700.8323.1 vs. uniprot
Match: A0A445IW95_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445IW95_GLYSO) HSP 1 Score: 117 bits (294), Expect = 6.370e-24 Identity = 115/455 (25.27%), Postives = 204/455 (44.84%), Query Frame = 1
Query: 340 LHCQGSPTVVPKKTDKRTIWAAERLYVDLGGPTRVTSLGGSSYVMTIVDDYSQFQAIESIKKKSDATAAFQSY--IAEYITPKEFKIGAIRTDNSGTFDGDFYLE-PDEHGLIHELTPPDTPQYNRVAERRLGLLREKTIA-LMQDQTEGGS--EKLWAEAMNYACDITNMSCTHQMEHGAT--------RRKVHHAGYFPQPLERNCPRSQYQDSIDRETSERVMASRECGG-------------LAPEIGGGDDKAIVWTPRLDSSGQVELETTLTMQPHQEDQPLQPEEXXXXXXXXKQDRPGPALRQLTDHFTGQQPS-----VALAMPEELRGDLPVEPKNHREAQASPEWEHWQRAEEVEMQDLIDIGVWTQVKLPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVTNGNRQIKGIHFQEVSFPAPAAASTKMMLSLAAIQDWELRHID 1608
L C+ S + + R E +Y D+ GP + SLGG+ Y ++ +D+ ++ + I++KSD F+ + +AE + KI +RTD G + + E D+ G+IHE+TPP TPQ+N AER+ +TI +++ +G S + LW EA++ A I NMS + ++E G T + V H F R+ P Q + +D + + ++ G ++ ++ + ++ W + G ++ ++ +E+ +++ P PA Q + + S V A+ E EP N +A + W A E++ + VW V PK+K + IYK K +GKV KYK RLV G Q GI ++EV P + + ++++A++++W + +D
Sbjct: 1204 LQCKQSRSTFKQNVPIRAKEKLEVIYSDVCGPMQTESLGGNKYFISFIDELTRKVWVYLIRRKSDVFEVFEKFKNMAEKQSGSLIKI--LRTDGGGEYVSTEFQEFCDQEGIIHEVTPPYTPQHNGAAERK-----NRTIMNMVRSMLKGKSLPKYLWGEAVSTAVFILNMSPSKRLE-GITPEEAWSGAKPNVSHFRIFGSLCFRHIP-DQLRRKLDDKGEQMILLGYHSTGGYKLFDPKSKKIIISRDVVFDESRSWNWEQNTEMKG-----PSIMIRSEEEETSEGNGNTTQREVRRQRNAPKPARFQGFEMLSDADVSADGNLVHFALFSE------AEPINFEDAMTD---QRWVEAMTEELKSIEKNQVWELVSQPKSKKPIDVKWIYKIKTNPEGKVVKYKARLVAKGFLQKAGIDYREVFAPVARIETIRTVVAIASLKNWTMHQLD 1635
BLAST of mRNA_H-paniculata_contig30700.8323.1 vs. uniprot
Match: A0A8J5YBS1_9ROSI (Uncharacterized protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YBS1_9ROSI) HSP 1 Score: 116 bits (291), Expect = 9.880e-24 Identity = 105/405 (25.93%), Postives = 175/405 (43.21%), Query Frame = 1
Query: 418 VDLGGPTRVTSLGGSSYVMTIVDDYSQFQAIESIKKKSDATAAFQSYIAEYITPKEFKIGAIRTDNSGTFDGDFYLEPD----EHGLIHELTPPDTPQYNRVAERRLGLLREKTIALMQDQTEGGSEKLWAEAMNYACDITNMSCTHQMEHGATRRKVHHAGYFPQPLERNCPRSQYQDSIDRETSERVMASRECGGLAPEIGGGDDKAIVWTPRLDSSGQVELETTLTMQPHQEDQPLQPEEXXXXXXXXKQDRPGPALRQLTDHFTGQQPSVALAMPEELRGDLPV----EPKNHREAQASPEWEHWQRAEEVEMQDLIDIGVWTQVKLPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVTNGNRQIKGIHFQEVSFPAPAAASTKMMLSLAAIQDWELRHID 1608
+D+ GP + G Y +T +DD+S++ + ++ KS+A F+ + E I +R+D G + LE D E G++ +LTPP TPQ+N V+ERR L + ++M S W A+ A N ++ + ++ + +P + + +TS ++ E G+ E + R S ++ELE Q E + Q + P R L + ++ + GD+ + EP+ ++EA ASPE E W A EM + + VWT V PK + ++K+KI DG V+ YK RLV G RQI G+++ E P S ++ L++AA D+E+ +D
Sbjct: 175 LDVCGPINTQARGRFHYFITFIDDFSRYGYVYLMRHKSEALEKFKEFKNEVQNQLGKTIKTLRSDRGGEY---LSLEFDDLLKECGIVSQLTPPGTPQWNGVSERRNRTLLDMVQSMMSHVDLPTS--FWGHALEIAIFTLN-----RVPSKSVQKMPYEMWTGKRPTMSFMKIWGCEAYVKCQTSTKLEPKSESTGVFLER--------EFVSRKGSGRKIELEEIRESQDTTEPEIKQQQIPQEIEEQVTTVETQPPRRSLRERHAPERYGFLIT----THGDILLIDQDEPRTYQEAVASPESEKWLEALRSEMDSMYENQVWTLVDPPKGVKPIGCKWVFKKKIDMDGNVQTYKGRLVAKGFRQIHGVNYDETFSPVAMFKSIRISLAIAAFHDYEIWQMD 557 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30700.8323.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig30700.8323.1 >prot_H-paniculata_contig30700.8323.1 ID=prot_H-paniculata_contig30700.8323.1|Name=mRNA_H-paniculata_contig30700.8323.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=536bp NNLAVTGEKEHWNSDTGAIDHMTSDETAFGDYTPALPGTMCKITNGTFVPback to top mRNA from alignment at H-paniculata_contig30700:797..2851+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig30700.8323.1 ID=mRNA_H-paniculata_contig30700.8323.1|Name=mRNA_H-paniculata_contig30700.8323.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2055bp|location=Sequence derived from alignment at H-paniculata_contig30700:797..2851+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig30700:797..2851+ >mRNA_H-paniculata_contig30700.8323.1 ID=mRNA_H-paniculata_contig30700.8323.1|Name=mRNA_H-paniculata_contig30700.8323.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3216bp|location=Sequence derived from alignment at H-paniculata_contig30700:797..2851+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |