prot_H-paniculata_contig30.8145.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig30.8145.1 vs. uniprot
Match: D7FT20_ECTSI (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT20_ECTSI) HSP 1 Score: 207 bits (527), Expect = 3.930e-65 Identity = 102/119 (85.71%), Postives = 111/119 (93.28%), Query Frame = 0
Query: 11 MPIILLHDAEGGIITVEMKNGEVCRGVLDEAEDSMNLVLKEVIITDLRGKNKRLQQLYIRGNQIVFCIVPDMLRNAPMFARIKQWRKYKGHPPILAAEGAKGQRAAIIRKSKPGGGRGD 129
MPIILLHDAEGGIITVE+KNGEVCRGVLDEAEDSMNLVLK+ + T++RGK LQQLYIRGNQIVFCIVP+MLRNAPMFARIKQ RKYKGHPP+LA+EGAKGQRAAIIRK+ GGGRGD
Sbjct: 1 MPIILLHDAEGGIITVELKNGEVCRGVLDEAEDSMNLVLKDCVKTNIRGKTSTLQQLYIRGNQIVFCIVPNMLRNAPMFARIKQGRKYKGHPPVLASEGAKGQRAAIIRKAAMGGGRGD 119
BLAST of mRNA_H-paniculata_contig30.8145.1 vs. uniprot
Match: A0A6H5L429_9PHAE (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L429_9PHAE) HSP 1 Score: 203 bits (517), Expect = 1.960e-64 Identity = 97/111 (87.39%), Postives = 106/111 (95.50%), Query Frame = 0
Query: 11 MPIILLHDAEGGIITVEMKNGEVCRGVLDEAEDSMNLVLKEVIITDLRGKNKRLQQLYIRGNQIVFCIVPDMLRNAPMFARIKQWRKYKGHPPILAAEGAKGQRAAIIRKS 121
MPIILLHDAEGGIITVE+KNGEVCRGVLDEAEDSMNLVLK+ + T++RGK LQQLYIRGNQIVFCIVP+MLRNAPMFARIKQWRKYKGHPP+LA+EGAKGQRAAIIRK+
Sbjct: 1 MPIILLHDAEGGIITVELKNGEVCRGVLDEAEDSMNLVLKDCVKTNIRGKTSTLQQLYIRGNQIVFCIVPNMLRNAPMFARIKQWRKYKGHPPVLASEGAKGQRAAIIRKA 111
BLAST of mRNA_H-paniculata_contig30.8145.1 vs. uniprot
Match: A0A835YVP5_9STRA (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVP5_9STRA) HSP 1 Score: 172 bits (437), Expect = 3.740e-52 Identity = 81/121 (66.94%), Postives = 101/121 (83.47%), Query Frame = 0
Query: 1 MSVTGNAGIGMPIILLHDAEGGIITVEMKNGEVCRGVLDEAEDSMNLVLKEVIITDLRGKNKRLQQLYIRGNQIVFCIVPDMLRNAPMFARIKQWRKYKGHPPILAAEGAKGQRAAIIRKS 121
MSVTGNAGIGMP+ILLHDAEG + TVE+K+GEV RG+LDEAED+MN+++K+++ TD+RGK L ++YIRG+QIV IVPDMLR A MF RI WRKYKG+PP LA+ GQRAAI+RK+
Sbjct: 1 MSVTGNAGIGMPVILLHDAEGAVCTVEVKSGEVYRGILDEAEDNMNILMKDILKTDVRGKTSTLSKMYIRGSQIVLVIVPDMLRRAAMFKRIVMWRKYKGNPPSLASSANTGQRAAILRKA 121
BLAST of mRNA_H-paniculata_contig30.8145.1 vs. uniprot
Match: A0A6U1QDM6_9STRA (Small nuclear ribonucleoprotein Sm D3 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QDM6_9STRA) HSP 1 Score: 153 bits (387), Expect = 1.720e-44 Identity = 73/122 (59.84%), Postives = 94/122 (77.05%), Query Frame = 0
Query: 1 MSVTGNAGIGMPIILLHDAEGGIITVEMKNGEVCRGVLDEAEDSMNLVLKEVIITDLRGKNKRLQQLYIRGNQIVFCIVPDMLRNAPMFARIKQWRKYKGHPPILAAEGAKGQRAAIIRKSK 122
MSVTG G+G+PII+LHDAEG I+TVE+KNGE RG+LDEAED+MN +L +V T GK ++ QLY+RG+QI F +VPD L+ PMF RI+ WRKYKG+PP L + +GQ AAIIRK++
Sbjct: 1 MSVTGKRGVGIPIIMLHDAEGCIVTVELKNGETYRGLLDEAEDNMNCILVDVTKTTPMGKISKVDQLYVRGSQISFVVVPDTLQKGPMFKRIQMWRKYKGNPPSLGSVVPRGQAAAIIRKAQ 122
BLAST of mRNA_H-paniculata_contig30.8145.1 vs. uniprot
Match: I2CSB6_NANGC (Small nuclear ribonucleoprotein Sm D3 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CSB6_NANGC) HSP 1 Score: 149 bits (377), Expect = 5.460e-43 Identity = 71/121 (58.68%), Postives = 96/121 (79.34%), Query Frame = 0
Query: 1 MSVTGNAGIGMPIILLHDAEGGIITVEMKNGEVCRGVLDEAEDSMNLVLKEVIITDLRGKNKRLQQLYIRGNQIVFCIVPDMLRNAPMFARIKQWRKYKGHPPILAAEGAKGQRAAIIRKS 121
MSVTG G+G+PIILLHDAEGGIITVE + GE+ RG+LDEAED+MNL+L++V T++ GK +++ +YI+G+Q+ F I+PDML+ APMF RIK W+KY G+ P L A G +GQ A I +K+
Sbjct: 1 MSVTGKGGVGIPIILLHDAEGGIITVETRTGELYRGLLDEAEDNMNLILRDVTKTNVHGKESKVELIYIKGSQVNFMILPDMLKKAPMFKRIKVWKKYHGNVPELGA-GVRGQAAVISQKT 120
BLAST of mRNA_H-paniculata_contig30.8145.1 vs. uniprot
Match: A0A7S4N4C1_9STRA (Small nuclear ribonucleoprotein Sm D3 (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N4C1_9STRA) HSP 1 Score: 142 bits (358), Expect = 3.970e-40 Identity = 73/132 (55.30%), Postives = 96/132 (72.73%), Query Frame = 0
Query: 1 MSVTGNAGIGMPIILLHDAEGGIITVEMKNGEVCRGVLDEAEDSMNLVLKEVIITDLRGKNKRLQQLYIRGNQIVFCIVPDMLRNAPMFARIKQWRKYKGHPPILAAEGAKGQRAAIIRKSKPGGGRGDFGG 132
MSV GN +G+PI+LLHDAEGGI+TVE + GE+ RG+L EAED MNL +K I+ D G +++ Q+Y+RG +IVF ++P+MLR+APMF RIK WRK+ G PP A GQ AAI+RK++ RG FGG
Sbjct: 1 MSVVGNNRVGIPIVLLHDAEGGIVTVETRKGEIVRGMLFEAEDMMNLYIKNAIVHDENGTKRKVDQMYLRGPEIVFIVLPNMLRHAPMFKRIKHWRKHGGAPPE-GVGAAVGQAAAILRKAQERR-RGGFGG 130
BLAST of mRNA_H-paniculata_contig30.8145.1 vs. uniprot
Match: A0A7S4VE27_9STRA (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VE27_9STRA) HSP 1 Score: 142 bits (358), Expect = 1.410e-39 Identity = 76/137 (55.47%), Postives = 100/137 (72.99%), Query Frame = 0
Query: 1 MSVTGNAGIGMPIILLHDAEGGIITVEMKNGEVCRGVLDEAEDSMNLVLKEVIITDLRGKNKRLQQLYIRGNQIVFCIVPDMLRNAPMFARIKQWRKYKGHPPILAAEGAKGQRAAIIRKS----KPG--GGRGDFG 131
MSV GN +G+PI+LLHDAEG +++VE KNGE+ RG+L EAED MNL LK+ ++ + +G + + Q+Y+RG++IVF +PDMLR+APMF RIK WRK+ G PP AA G Q AAI+RK+ K G GGRG FG
Sbjct: 1 MSVVGNNRVGIPIVLLHDAEGSVVSVETKNGELIRGLLFEAEDMMNLYLKKAVVLNPQGVKRSVDQVYVRGSEIVFISLPDMLRHAPMFQRIKHWRKHGGAPPEGAAVG---QAAAILRKATERRKGGFAGGRGGFG 134
BLAST of mRNA_H-paniculata_contig30.8145.1 vs. uniprot
Match: F0W7K3_9STRA (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W7K3_9STRA) HSP 1 Score: 140 bits (354), Expect = 1.650e-39 Identity = 66/127 (51.97%), Postives = 92/127 (72.44%), Query Frame = 0
Query: 1 MSVTGNAGIGMPIILLHDAEGGIITVEMKNGEVCRGVLDEAEDSMNLVLKEVIITDLRGKNKRLQQLYIRGNQIVFCIVPDMLRNAPMFARIKQWRKYKGHPPILA-----AEGAKGQRAAIIRKSK 122
M+VTG G+G+P ILLHD EG +++EMK+GE+ RG L+E ED+MN VLKE + TD+ G ++ +Y+RG+QI+F + PDML++APMF R+K W+K+KG P L G +GQ AAIIRK+K
Sbjct: 1 MAVTGKRGVGIPTILLHDGEGTTVSIEMKSGEIYRGYLEETEDNMNCVLKEAMRTDINGNTTHVELVYVRGSQILFIVFPDMLKHAPMFKRVKLWKKHKGVIPSLGQGGPGGAGPRGQAAAIIRKAK 127
BLAST of mRNA_H-paniculata_contig30.8145.1 vs. uniprot
Match: A0A7S3K1R1_9STRA (Small nuclear ribonucleoprotein Sm D3 (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K1R1_9STRA) HSP 1 Score: 140 bits (354), Expect = 1.860e-39 Identity = 66/122 (54.10%), Postives = 92/122 (75.41%), Query Frame = 0
Query: 1 MSVTGNAGIGMPIILLHDAEGGIITVEMKNGEVCRGVLDEAEDSMNLVLKEVIITDLRGKNKRLQQLYIRGNQIVFCIVPDMLRNAPMFARIKQWRKYKGHPPILAAEGAKGQRAAIIRKSK 122
MSVTG GIG+PIIL+HD EG I+TVE KNG++ RG LDE ED+MN ++K+V T GK +++ ++IRG+QI+F + P ML+ APMF R++ WRK++G+ I E A+GQ AAIIRK++
Sbjct: 18 MSVTGKRGIGVPIILMHDGEGTIVTVECKNGDMYRGFLDETEDNMNCIMKDVTKTSAEGKKSQIEHIFIRGSQILFFVFPTMLKKAPMFKRVRTWRKHRGN--ISKGEEARGQAAAIIRKAQ 137
BLAST of mRNA_H-paniculata_contig30.8145.1 vs. uniprot
Match: A0A067C915_SAPPC (Small nuclear ribonucleoprotein Sm D3 n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C915_SAPPC) HSP 1 Score: 135 bits (341), Expect = 1.570e-37 Identity = 65/129 (50.39%), Postives = 87/129 (67.44%), Query Frame = 0
Query: 1 MSVTGNAGIGMPIILLHDAEGGIITVEMKNGEVCRGVLDEAEDSMNLVLKEVIITDLRGKNKRLQQLYIRGNQIVFCIVPDMLRNAPMFARIKQWRKYKGHPPILAAEGA---------KGQRAAIIRK 120
M+VTG G+G+P ILLHD EG I+TVE+KNG++ RG LDE ED+MN VLK+ TD+RG Q+Y+RG+QI+F I PDML++AP F R+K W+K+KG P L G +G A++RK
Sbjct: 1 MAVTGKRGVGIPTILLHDGEGTIVTVELKNGDLYRGFLDETEDNMNCVLKDAYRTDIRGMQSHCDQVYLRGSQILFIIFPDMLKHAPFFKRVKLWKKHKGSIPALGLGGGAHIGLGNSQRGPTGAMVRK 129 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30.8145.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig30.8145.1 ID=prot_H-paniculata_contig30.8145.1|Name=mRNA_H-paniculata_contig30.8145.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=201bpback to top |