mRNA_H-paniculata_contig30.8145.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig30.8145.1
Unique NamemRNA_H-paniculata_contig30.8145.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig30.8145.1 vs. uniprot
Match: D7FT20_ECTSI (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT20_ECTSI)

HSP 1 Score: 207 bits (527), Expect = 7.370e-61
Identity = 102/119 (85.71%), Postives = 111/119 (93.28%), Query Frame = 2 
Query:  113 MPIILLHDAEGGIITVEMKNGEVCRGVLDEAEDSMNLVLKEVIITDLRGKNKRLQQLYIRGNQIVFCIVPDMLRNAPMFARIKQWRKYKGHPPILAAEGAKGQRAAIIRKSKPGGGRGD 469
            MPIILLHDAEGGIITVE+KNGEVCRGVLDEAEDSMNLVLK+ + T++RGK   LQQLYIRGNQIVFCIVP+MLRNAPMFARIKQ RKYKGHPP+LA+EGAKGQRAAIIRK+  GGGRGD
Sbjct:    1 MPIILLHDAEGGIITVELKNGEVCRGVLDEAEDSMNLVLKDCVKTNIRGKTSTLQQLYIRGNQIVFCIVPNMLRNAPMFARIKQGRKYKGHPPVLASEGAKGQRAAIIRKAAMGGGRGD 119
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BLAST of mRNA_H-paniculata_contig30.8145.1 vs. uniprot
Match: A0A6H5L429_9PHAE (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L429_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 3.340e-60
Identity = 97/111 (87.39%), Postives = 106/111 (95.50%), Query Frame = 2 
Query:  113 MPIILLHDAEGGIITVEMKNGEVCRGVLDEAEDSMNLVLKEVIITDLRGKNKRLQQLYIRGNQIVFCIVPDMLRNAPMFARIKQWRKYKGHPPILAAEGAKGQRAAIIRKS 445
            MPIILLHDAEGGIITVE+KNGEVCRGVLDEAEDSMNLVLK+ + T++RGK   LQQLYIRGNQIVFCIVP+MLRNAPMFARIKQWRKYKGHPP+LA+EGAKGQRAAIIRK+
Sbjct:    1 MPIILLHDAEGGIITVELKNGEVCRGVLDEAEDSMNLVLKDCVKTNIRGKTSTLQQLYIRGNQIVFCIVPNMLRNAPMFARIKQWRKYKGHPPVLASEGAKGQRAAIIRKA 111
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BLAST of mRNA_H-paniculata_contig30.8145.1 vs. uniprot
Match: A0A835YVP5_9STRA (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVP5_9STRA)

HSP 1 Score: 173 bits (438), Expect = 1.870e-48
Identity = 81/121 (66.94%), Postives = 101/121 (83.47%), Query Frame = 2 
Query:   83 MSVTGNAGIGMPIILLHDAEGGIITVEMKNGEVCRGVLDEAEDSMNLVLKEVIITDLRGKNKRLQQLYIRGNQIVFCIVPDMLRNAPMFARIKQWRKYKGHPPILAAEGAKGQRAAIIRKS 445
            MSVTGNAGIGMP+ILLHDAEG + TVE+K+GEV RG+LDEAED+MN+++K+++ TD+RGK   L ++YIRG+QIV  IVPDMLR A MF RI  WRKYKG+PP LA+    GQRAAI+RK+
Sbjct:    1 MSVTGNAGIGMPVILLHDAEGAVCTVEVKSGEVYRGILDEAEDNMNILMKDILKTDVRGKTSTLSKMYIRGSQIVLVIVPDMLRRAAMFKRIVMWRKYKGNPPSLASSANTGQRAAILRKA 121
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BLAST of mRNA_H-paniculata_contig30.8145.1 vs. uniprot
Match: A0A6U1QDM6_9STRA (Small nuclear ribonucleoprotein Sm D3 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QDM6_9STRA)

HSP 1 Score: 154 bits (388), Expect = 4.180e-41
Identity = 73/122 (59.84%), Postives = 94/122 (77.05%), Query Frame = 2 
Query:   83 MSVTGNAGIGMPIILLHDAEGGIITVEMKNGEVCRGVLDEAEDSMNLVLKEVIITDLRGKNKRLQQLYIRGNQIVFCIVPDMLRNAPMFARIKQWRKYKGHPPILAAEGAKGQRAAIIRKSK 448
            MSVTG  G+G+PII+LHDAEG I+TVE+KNGE  RG+LDEAED+MN +L +V  T   GK  ++ QLY+RG+QI F +VPD L+  PMF RI+ WRKYKG+PP L +   +GQ AAIIRK++
Sbjct:    1 MSVTGKRGVGIPIIMLHDAEGCIVTVELKNGETYRGLLDEAEDNMNCILVDVTKTTPMGKISKVDQLYVRGSQISFVVVPDTLQKGPMFKRIQMWRKYKGNPPSLGSVVPRGQAAAIIRKAQ 122
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BLAST of mRNA_H-paniculata_contig30.8145.1 vs. uniprot
Match: I2CSB6_NANGC (Small nuclear ribonucleoprotein Sm D3 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CSB6_NANGC)

HSP 1 Score: 150 bits (378), Expect = 1.120e-39
Identity = 71/121 (58.68%), Postives = 96/121 (79.34%), Query Frame = 2 
Query:   83 MSVTGNAGIGMPIILLHDAEGGIITVEMKNGEVCRGVLDEAEDSMNLVLKEVIITDLRGKNKRLQQLYIRGNQIVFCIVPDMLRNAPMFARIKQWRKYKGHPPILAAEGAKGQRAAIIRKS 445
            MSVTG  G+G+PIILLHDAEGGIITVE + GE+ RG+LDEAED+MNL+L++V  T++ GK  +++ +YI+G+Q+ F I+PDML+ APMF RIK W+KY G+ P L A G +GQ A I +K+
Sbjct:    1 MSVTGKGGVGIPIILLHDAEGGIITVETRTGELYRGLLDEAEDNMNLILRDVTKTNVHGKESKVELIYIKGSQVNFMILPDMLKKAPMFKRIKVWKKYHGNVPELGA-GVRGQAAVISQKT 120
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BLAST of mRNA_H-paniculata_contig30.8145.1 vs. uniprot
Match: A0A7S4N4C1_9STRA (Small nuclear ribonucleoprotein Sm D3 (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N4C1_9STRA)

HSP 1 Score: 142 bits (359), Expect = 5.850e-37
Identity = 73/132 (55.30%), Postives = 96/132 (72.73%), Query Frame = 2 
Query:   83 MSVTGNAGIGMPIILLHDAEGGIITVEMKNGEVCRGVLDEAEDSMNLVLKEVIITDLRGKNKRLQQLYIRGNQIVFCIVPDMLRNAPMFARIKQWRKYKGHPPILAAEGAKGQRAAIIRKSKPGGGRGDFGG 478
            MSV GN  +G+PI+LLHDAEGGI+TVE + GE+ RG+L EAED MNL +K  I+ D  G  +++ Q+Y+RG +IVF ++P+MLR+APMF RIK WRK+ G PP      A GQ AAI+RK++    RG FGG
Sbjct:    1 MSVVGNNRVGIPIVLLHDAEGGIVTVETRKGEIVRGMLFEAEDMMNLYIKNAIVHDENGTKRKVDQMYLRGPEIVFIVLPNMLRHAPMFKRIKHWRKHGGAPPE-GVGAAVGQAAAILRKAQERR-RGGFGG 130
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BLAST of mRNA_H-paniculata_contig30.8145.1 vs. uniprot
Match: A0A7S3K1R1_9STRA (Small nuclear ribonucleoprotein Sm D3 (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K1R1_9STRA)

HSP 1 Score: 142 bits (357), Expect = 1.320e-36
Identity = 66/124 (53.23%), Postives = 94/124 (75.81%), Query Frame = 2 
Query:   77 VTMSVTGNAGIGMPIILLHDAEGGIITVEMKNGEVCRGVLDEAEDSMNLVLKEVIITDLRGKNKRLQQLYIRGNQIVFCIVPDMLRNAPMFARIKQWRKYKGHPPILAAEGAKGQRAAIIRKSK 448
            ++MSVTG  GIG+PIIL+HD EG I+TVE KNG++ RG LDE ED+MN ++K+V  T   GK  +++ ++IRG+QI+F + P ML+ APMF R++ WRK++G+  I   E A+GQ AAIIRK++
Sbjct:   16 LSMSVTGKRGIGVPIILMHDGEGTIVTVECKNGDMYRGFLDETEDNMNCIMKDVTKTSAEGKKSQIEHIFIRGSQILFFVFPTMLKKAPMFKRVRTWRKHRGN--ISKGEEARGQAAAIIRKAQ 137
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BLAST of mRNA_H-paniculata_contig30.8145.1 vs. uniprot
Match: A0A7S4VE27_9STRA (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VE27_9STRA)

HSP 1 Score: 142 bits (359), Expect = 2.090e-36
Identity = 76/137 (55.47%), Postives = 100/137 (72.99%), Query Frame = 2 
Query:   83 MSVTGNAGIGMPIILLHDAEGGIITVEMKNGEVCRGVLDEAEDSMNLVLKEVIITDLRGKNKRLQQLYIRGNQIVFCIVPDMLRNAPMFARIKQWRKYKGHPPILAAEGAKGQRAAIIRKS----KPG--GGRGDFG 475
            MSV GN  +G+PI+LLHDAEG +++VE KNGE+ RG+L EAED MNL LK+ ++ + +G  + + Q+Y+RG++IVF  +PDMLR+APMF RIK WRK+ G PP  AA G   Q AAI+RK+    K G  GGRG FG
Sbjct:    1 MSVVGNNRVGIPIVLLHDAEGSVVSVETKNGELIRGLLFEAEDMMNLYLKKAVVLNPQGVKRSVDQVYVRGSEIVFISLPDMLRHAPMFQRIKHWRKHGGAPPEGAAVG---QAAAILRKATERRKGGFAGGRGGFG 134
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BLAST of mRNA_H-paniculata_contig30.8145.1 vs. uniprot
Match: F0W7K3_9STRA (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W7K3_9STRA)

HSP 1 Score: 141 bits (355), Expect = 2.250e-36
Identity = 66/127 (51.97%), Postives = 92/127 (72.44%), Query Frame = 2 
Query:   83 MSVTGNAGIGMPIILLHDAEGGIITVEMKNGEVCRGVLDEAEDSMNLVLKEVIITDLRGKNKRLQQLYIRGNQIVFCIVPDMLRNAPMFARIKQWRKYKGHPPILA-----AEGAKGQRAAIIRKSK 448
            M+VTG  G+G+P ILLHD EG  +++EMK+GE+ RG L+E ED+MN VLKE + TD+ G    ++ +Y+RG+QI+F + PDML++APMF R+K W+K+KG  P L        G +GQ AAIIRK+K
Sbjct:    1 MAVTGKRGVGIPTILLHDGEGTTVSIEMKSGEIYRGYLEETEDNMNCVLKEAMRTDINGNTTHVELVYVRGSQILFIVFPDMLKHAPMFKRVKLWKKHKGVIPSLGQGGPGGAGPRGQAAAIIRKAK 127
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BLAST of mRNA_H-paniculata_contig30.8145.1 vs. uniprot
Match: A0A067C915_SAPPC (Small nuclear ribonucleoprotein Sm D3 n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C915_SAPPC)

HSP 1 Score: 136 bits (342), Expect = 1.670e-34
Identity = 65/129 (50.39%), Postives = 87/129 (67.44%), Query Frame = 2 
Query:   83 MSVTGNAGIGMPIILLHDAEGGIITVEMKNGEVCRGVLDEAEDSMNLVLKEVIITDLRGKNKRLQQLYIRGNQIVFCIVPDMLRNAPMFARIKQWRKYKGHPPILAAEGA---------KGQRAAIIRK 442
            M+VTG  G+G+P ILLHD EG I+TVE+KNG++ RG LDE ED+MN VLK+   TD+RG      Q+Y+RG+QI+F I PDML++AP F R+K W+K+KG  P L   G          +G   A++RK
Sbjct:    1 MAVTGKRGVGIPTILLHDGEGTIVTVELKNGDLYRGFLDETEDNMNCVLKDAYRTDIRGMQSHCDQVYLRGSQILFIIFPDMLKHAPFFKRVKLWKKHKGSIPALGLGGGAHIGLGNSQRGPTGAMVRK 129
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30.8145.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT20_ECTSI7.370e-6185.71Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Ecto... [more]
A0A6H5L429_9PHAE3.340e-6087.39Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Ecto... [more]
A0A835YVP5_9STRA1.870e-4866.94Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Trib... [more]
A0A6U1QDM6_9STRA4.180e-4159.84Small nuclear ribonucleoprotein Sm D3 (Fragment) n... [more]
I2CSB6_NANGC1.120e-3958.68Small nuclear ribonucleoprotein Sm D3 (Fragment) n... [more]
A0A7S4N4C1_9STRA5.850e-3755.30Small nuclear ribonucleoprotein Sm D3 (Fragment) n... [more]
A0A7S3K1R1_9STRA1.320e-3653.23Small nuclear ribonucleoprotein Sm D3 (Fragment) n... [more]
A0A7S4VE27_9STRA2.090e-3655.47Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Dity... [more]
F0W7K3_9STRA2.250e-3651.97Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Albu... [more]
A0A067C915_SAPPC1.670e-3450.39Small nuclear ribonucleoprotein Sm D3 n=5 Tax=Sapr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig30contigH-paniculata_contig30:60434..64730 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score209.1
Seed ortholog evalue1.9e-51
Seed eggNOG ortholog2880.D7FT20
Preferred nameSMD3
KEGG koko:K07442,ko:K11088,ko:K18738
KEGG Pathwayko03040,ko04139,ko05322,map03040,map04139,map05322
KEGG ModuleM00351,M00352,M00354,M00355,M00398
Hectar predicted targeting categoryother localisation
GOsGO:0000243,GO:0000245,GO:0000375,GO:0000377,GO:0000387,GO:0000395,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005682,GO:0005683,GO:0005684,GO:0005685,GO:0005686,GO:0005687,GO:0005689,GO:0005697,GO:0005737,GO:0005829,GO:0006139,GO:0006325,GO:0006342,GO:0006351,GO:0006353,GO:0006355,GO:0006366,GO:0006369,GO:0006376,GO:0006396,GO:0006397,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0006810,GO:0006913,GO:0006996,GO:0008150,GO:0008152,GO:0008213,GO:0008334,GO:0008380,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016458,GO:0016604,GO:0017069,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019899,GO:0022607,GO:0022613,GO:0022618,GO:0030532,GO:0030620,GO:0030702,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032259,GO:0032774,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034708,GO:0034709,GO:0034715,GO:0034719,GO:0036211,GO:0040029,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043414,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045292,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0046540,GO:0046907,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051169,GO:0051170,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051252,GO:0051253,GO:0051276,GO:0051641,GO:0051649,GO:0060255,GO:0065003,GO:0065007,GO:0070013,GO:0070034,GO:0071004,GO:0071007,GO:0071010,GO:0071011,GO:0071013,GO:0071014,GO:0071208,GO:0071209,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097525,GO:0097526,GO:0097659,GO:0120114,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1902494,GO:1902679,GO:1903506,GO:1903507,GO:1990141,GO:1990234,GO:1990904,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.U7 snRNA binding
EggNOG OGsCOG1958@1,KOG3172@2759
Ec32 ortholog descriptionSmall nuclear ribonucleoprotein-associated protein D3
Ec32 orthologEc-04_002450.1
EC2.1.1.219,2.1.1.220
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03016,ko03019,ko03032,ko03041
Exons4
Model size1594
Cds size603
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig30.8145.1prot_H-paniculata_contig30.8145.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig30 60516..63821 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929921.6162043-UTR-H-paniculata_contig30:60433..605151622929921.6162043-UTR-H-paniculata_contig30:60433..60515Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig30 60434..60515 +
1691481070.7395525-UTR-H-paniculata_contig30:60433..605151691481070.7395525-UTR-H-paniculata_contig30:60433..60515Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig30 60434..60515 +
1622929921.7150037-UTR-H-paniculata_contig30:63821..647301622929921.7150037-UTR-H-paniculata_contig30:63821..64730Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig30 63822..64730 +
1691481070.7836087-UTR-H-paniculata_contig30:63821..647301691481070.7836087-UTR-H-paniculata_contig30:63821..64730Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig30 63822..64730 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929921.6333709-CDS-H-paniculata_contig30:60515..605161622929921.6333709-CDS-H-paniculata_contig30:60515..60516Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig30 60516..60516 +
1691481070.7517495-CDS-H-paniculata_contig30:60515..605161691481070.7517495-CDS-H-paniculata_contig30:60515..60516Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig30 60516..60516 +
1622929921.6585844-CDS-H-paniculata_contig30:60907..610561622929921.6585844-CDS-H-paniculata_contig30:60907..61056Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig30 60908..61056 +
1691481070.759531-CDS-H-paniculata_contig30:60907..610561691481070.759531-CDS-H-paniculata_contig30:60907..61056Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig30 60908..61056 +
1622929921.6775072-CDS-H-paniculata_contig30:61688..619031622929921.6775072-CDS-H-paniculata_contig30:61688..61903Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig30 61689..61903 +
1691481070.767228-CDS-H-paniculata_contig30:61688..619031691481070.767228-CDS-H-paniculata_contig30:61688..61903Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig30 61689..61903 +
1622929921.69547-CDS-H-paniculata_contig30:63583..638211622929921.69547-CDS-H-paniculata_contig30:63583..63821Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig30 63584..63821 +
1691481070.7754924-CDS-H-paniculata_contig30:63583..638211691481070.7754924-CDS-H-paniculata_contig30:63583..63821Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig30 63584..63821 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig30.8145.1

>prot_H-paniculata_contig30.8145.1 ID=prot_H-paniculata_contig30.8145.1|Name=mRNA_H-paniculata_contig30.8145.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=201bp
MSVTGNAGIGMPIILLHDAEGGIITVEMKNGEVCRGVLDEAEDSMNLVLK
EVIITDLRGKNKRLQQLYIRGNQIVFCIVPDMLRNAPMFARIKQWRKYKG
HPPILAAEGAKGQRAAIIRKSKPGGGRGDFGGPPGGRGDGGRGDGGRGDG
GRGRGSGGFGGSGAGAYGPAGGGGGGGFGGGRGGGSFGGGAGRGASPFAR
*
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mRNA from alignment at H-paniculata_contig30:60434..64730+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig30.8145.1 ID=mRNA_H-paniculata_contig30.8145.1|Name=mRNA_H-paniculata_contig30.8145.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4297bp|location=Sequence derived from alignment at H-paniculata_contig30:60434..64730+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAAAGGAAAGTGAATTGAGGCTGGGAGTCCAGGGAGAGTGTGTATCGGCG
TGGATTCTGGTTGCAGCTGAGATTGTGTTACAAGTGAGTTAATGGTGCTT
GGAGATTAGCCATACTTGGGGGGATTGTTTGTTGGTGTGGGATGTGAAGG
GAAGCATGGACGCGGGGCAACAAGCATCTCGTTAGCGTTGGGGTGTACAT
TAGTACAGTGGTTGTTGTGACCTAGTCCTTGTAATGCGAGGTACTGTCTG
TAGCTTGCCCTACTTGCAGCCCTCGGTTGGTCCTCCCTTTTTCAGCAGGT
TCAAGTGCTACTGTGGTTCGTCCAATTCCAATTGCAAATTTTACTCATGA
AGCACCCAAAGGCCTGCTAGCTTCTGCGGCCATAATTCATTTTTGAAAAT
CTCCCTCTTTTCCCCATCTGATTTTTTTCCCCTCGGCGCCTCTCTCCCTT
CTATATTTTGGACGCAATCCGCAGTGTCAGTCACCGGCAATGCGGGGATA
GGTATGCCCATTATCCTTCTGCACGATGCGGAGGGGGGGATTATCACGGT
AGAGATGAAGAACGGGGAGGTTTGCAGGGGTGTCCTCGATGAGGCGGAAG
ATAGCATGAACCTTGTGCTCAAGGTGATTCTGTCTTTTCAACTGCTTGAC
TCTCACCCCGATTATTCAGAGTCCCATCATGGTTACATTCTCCCATTCAC
CTGGTGTGTAAACAATTAGAGTCGTCGCTAAGGATAGAGAAAATATGACC
TGGTTCCAATATAGCACGCGAAGTTCCCAATGCGGTAGAAGCTGTTGTGC
GGGATTCAAGAACAAGGGAGAGGAGCTTCTACATTTTCGATAATTATCCT
TTCTTTTTTACTACAGTAATTTTTTTTCAATGCTGTATATATAGATAGAT
AAACGAGAACGGAAATAGGTGCATTTTAAGGGTAAGTGTAACCTACGTTT
GAAACAGCTCCAAGCTTGAACCGTTTTGATGCAGAGGCGGGCTATAACAG
CACAACAGAGTACAATACAGTCGAGTTATAGCAACTTACTTTGTCATCGG
CAAGTCCCTCGATTGTGTCCCGCCTGTGGCTAGATTTCATAATTGGTTAC
CTTGACGTTGAAGCTATCACGTATCACACTTTGGTGTACTGTCTGTGATA
TTTGCCATTGGTAGCCAATTTCATCTCGACGACCACTTTGGCTTCCACGC
AAAACGAACCTCGTCTGCCTTTCGACCCGAATATGTGCCACGTGGTTTTT
CTCAGGAAGTCATCATAACCGACCTAAGAGGGAAGAATAAAAGGTTACAG
CAGCTCTACATCCGCGGCAACCAGATCGTCTTCTGCATAGTACCGGACAT
GCTCCGGAATGCGCCCATGTTTGCGAGGATCAAGCAGTGGAGGAAGTACA
AGGGGCACCCCCCCATTTTGGCTGCCGAAGGAGCCAAGGGACAACGAGCG
GCTATCATACGCAAAAGTAAGTGTGATCTATGTACATAATTATCCAGCTG
CGCCTCATCTCTGTGTCATGGTGGGGGAGGGTCCCACCACAATGCGGTGT
TGTGACACGTGATTTTTACCCCACTCTGGGGGGAGCCTGCACTGCGCTGT
CACGATACGGTGACTCCATTGTAACGGATCGGATCACTGGAAGGTACCTT
ACTATGCCGGACCAAATTCCTGTATAATTCTCCACTGCACTACTCAGAAT
GTGCATCAATCAGTACATACGGAAACCGTCAAATGGGAACGCCGGGGCTG
GCGTTAGCAGTGCATCCCAACAGCGGTACGCCTATACGCAACCTTCCGTT
TTTTTCAGACACCACGGACAAGTCACCGGCATTAAAGTGTAGTTGTTTCA
CTTCATGTTGACGTGTGAATTAATCGTCTCCCTGTCGATTCTAGTTCGCT
TGCCTCGAATCGCACTCGCCGCCTCATATGGCATCATTGTATTATAATGA
ATCAGACATTTACTGAATGGTGTTCATTGTTTTTTGTACAAGTACTACTG
TACATTTCAGAGGTTACCGAAAATCAACACAGAAAAACCACGATCTATCG
CACATATACCGGAATATGTCGCTTCCAACAGTCAAAATGTAGGGCACATG
CCTCTGGTCAGTACAACCTATTTTCCACCCACAGAGTGACCGCTGCAGGC
TACATGGTACCCCCTCTACGCTTGCGAAAATAGCGTGATGTACAGCTCAG
GTAGTGTCGGCGCTCAGTGGATTATTGTCGAAGCGAAAATCTGTGCTTGT
ATAGTGTGGTATCCGCACTCTGGTAGGACCCCCATTATACCAGCAATTAT
GTGTATAGTACTTGTAGATCCCTTCTTAGTGCAATAGTAAATTGACAGGG
AGCGTTGCTTCTCAGCTGGCACAATGTTTTACGTATTTTAATGCAGGCGA
CAACCACACGATCTGCATGGTTTGCGTCTAGACTACAAGATTGATACTCA
TATTTGGTTTATAGTTACTGGGTGGGTTCTGGGGTTTTATAAGTGACTGA
ATGTTCCAATTGAGCTGTAGGCATCCAACAAATTGTTGAAACTAATGCGT
ATGAAGAATAGCGAATGACTAGTTGTTCGTAAAAGCTATTTTTTCCATGT
CACACAGAAGCAACCCTATTTTGCCTGTGCAGCCTAACAGGTGCGACGAG
GCGTATTGTGCATACATTGAATCAACCTGTACTCAACATCACGGACACCC
CCCAACTACTATATTCAGTATTTAGGAGATGCTTTAACATTGAACATTGT
TGGTATCTTGGTGAAAACGTGTTTGTACCTTTCACTTTGGTGGTCTAGAC
CACAAATTGCTCCTTTTTTCGAAAACATGTAACTACCGGTTGTGGTGGCT
GTAGCGATTGCATCGTACTAAGCACCGCTACAACGGCTAAACACAAGAGT
AAATATTTAATCCTCCAATCGAAATCATGATACATGAAACCGAACTGAAC
GTCATTATAGCTCATGGTTTTATGATCAAACGCGAACCAGACAGAGGATA
ATTTCTTATTTCTTCGTGGAAAAAAAGCGGTTTCGACTAGCGAACTGTAA
CAGGTTCCTTGGTCCAAATTGAGGTGAACCAATGTCAGCTGAATGCCCCC
CCCCCCCATCAAAATGTGTTTTCCGTTCTGGTGGTGTTCACAGCAATGAG
GCCAGGAGGAGGGAGGGGAGATTTCGGAGGGCCGCCAGGTGGACGCGGTG
ATGGCGGCCGCGGTGACGGTGGTCGCGGTGACGGCGGGCGTGGACGGGGC
TCGGGAGGGTTTGGAGGGAGCGGAGCTGGGGCATACGGTCCTGCAGGCGG
GGGCGGGGGGGGTGGATTTGGTGGTGGTCGGGGGGGCGGCAGCTTTGGCG
GGGGAGCAGGAAGGGGGGCGTCGCCATTTGCGCGGTGACCTTTGGGCGAA
TTGCAGTCTTTCTAAAAGCTAGTGCAGGTCAAGAATACCCAAGAAGGGAC
GACAATTTCGTCGGTTATCGAGACGTTGTCTCACAGGGAGCTGAGAGAAG
CGGGTTGGAGTGGGGGCAGGGCGTGCATACCACACGTTTGGATTGGATTG
GTAGCCATTACTGATATATTTCCCATACAAATGGGAGGTTTATCTTGGAA
CCAAGTATATATGCTTTTGGTAAAATGATCGCTTTTTAATTTCGGAGTGT
GCTGCGCAAGTGAAATAAGTGGATATAGTTCTTTTATAATATAGCGTGCG
ACCCGCCCTGTTGACGACCAAGCACCAGGGCTCGTAATACCGCTTGAAAT
GGAAGCAGCACGTGGATGACCCCGTCTTCTAGGGAGTATAACTATTTGCT
TCATGTACGTCTACCTTGTACATATACTGTCCAGGGCAGACAACAGCTAC
GTACATCGATCAGCAAACTTGAAAAAAAAAGGGGGGCGACGTGCCTTGTC
TCTTTTTCAGATTTTTGGGCAAAAGAGGGCCAGCGAAAGATTTTGGCCTG
CGTTAATAATATCAAAGTGTTCGTTCGCCCAGCTTGCGGCGGATTACGAT
TGTGTTGTTGCTGTAGAATAAACACGCTTCCGTTTGTCACGACTGAGGCT
GATTTTCTGAAGGATGAAGTTCAAGGGGTAGTCAGAATTGGTTGAGGTCC
ATCTACAAAAAACTCTGCATACTTGGAAATCCGGAAAGTTTTTTGGACCG
TTTTGGGTTAACAGCCTCCTCACAACCCAAAAGTTGACCAGCTCGAGTAA
ATCACAATATCTATCTCAGCCTTGACTTTGAAACCATGATATATCCCCGC
TGAACACCGAAGCTGAAAAAGCGGTTGCTCGTCTAGCACAGGAGTGG
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Coding sequence (CDS) from alignment at H-paniculata_contig30:60434..64730+

>mRNA_H-paniculata_contig30.8145.1 ID=mRNA_H-paniculata_contig30.8145.1|Name=mRNA_H-paniculata_contig30.8145.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1206bp|location=Sequence derived from alignment at H-paniculata_contig30:60434..64730+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AATGTCAGTCACCGGCAATGCGGGGATAGGTATGCCCATTATCCTTCTGC
ACGATGCGGAGGGGGGGATTATCACGGTAGAGATGAAGAACGGGGAGGTT
TGCAGGGGTGTCCTCGATGAGGCGGAAGATAGCATGAACCTTGTGCTCAA
GTGTCAGTCACCGGCAATGCGGGGATAGGTATGCCCATTATCCTTCTGCA
CGATGCGGAGGGGGGGATTATCACGGTAGAGATGAAGAACGGGGAGGTTT
GCAGGGGTGTCCTCGATGAGGCGGAAGATAGCATGAACCTTGTGCTCAAG
GAAGTCATCATAACCGACCTAAGAGGGAAGAATAAAAGGTTACAGCAGCT
CTACATCCGCGGCAACCAGATCGTCTTCTGCATAGTACCGGACATGCTCC
GGAATGCGCCCATGTTTGCGAGGATCAAGCAGTGGAGGAAGTACAAGGGG
CACCCCCCCATTTTGGCTGCCGAAGGAGCCAAGGGACAACGAGCGGCTAT
CATACGCAAAAGTAAGAAGTCATCATAACCGACCTAAGAGGGAAGAATAA
AAGGTTACAGCAGCTCTACATCCGCGGCAACCAGATCGTCTTCTGCATAG
TACCGGACATGCTCCGGAATGCGCCCATGTTTGCGAGGATCAAGCAGTGG
AGGAAGTACAAGGGGCACCCCCCCATTTTGGCTGCCGAAGGAGCCAAGGG
ACAACGAGCGGCTATCATACGCAAAAGTAAGCCAGGAGGAGGGAGGGGAG
ATTTCGGAGGGCCGCCAGGTGGACGCGGTGATGGCGGCCGCGGTGACGGT
GGTCGCGGTGACGGCGGGCGTGGACGGGGCTCGGGAGGGTTTGGAGGGAG
CGGAGCTGGGGCATACGGTCCTGCAGGCGGGGGCGGGGGGGGTGGATTTG
GTGGTGGTCGGGGGGGCGGCAGCTTTGGCGGGGGAGCAGGAAGGGGGGCG
TCGCCATTTGCGCGGTGAGCCAGGAGGAGGGAGGGGAGATTTCGGAGGGC
CGCCAGGTGGACGCGGTGATGGCGGCCGCGGTGACGGTGGTCGCGGTGAC
GGCGGGCGTGGACGGGGCTCGGGAGGGTTTGGAGGGAGCGGAGCTGGGGC
ATACGGTCCTGCAGGCGGGGGCGGGGGGGGTGGATTTGGTGGTGGTCGGG
GGGGCGGCAGCTTTGGCGGGGGAGCAGGAAGGGGGGCGTCGCCATTTGCG
CGGTGA
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