prot_H-paniculata_contig28569.7782.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig28569.7782.1 vs. uniprot
Match: A0A6H5JNN2_9PHAE (DNA-directed RNA polymerase subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNN2_9PHAE) HSP 1 Score: 511 bits (1315), Expect = 9.870e-177 Identity = 257/270 (95.19%), Postives = 263/270 (97.41%), Query Frame = 0
Query: 1 KGVVEYIDTEEEETTMIAMEPKDLEEAGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPMKPLVTTRAMEHLHFRELPSGVNVIVGIMVYSGYNQEDSLIMNQSAIDRGLFRSSFFRTLSDQEKASAGRGMGDMAVLSAESFERPARENTAGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLGGG-GGVMGGPGHRSKKDSSTVMRSHEDGIVDRVMLTTNQEGFKFCKV 269
+GVVEYIDTEEEETTM+AMEPKDLEE+GGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYP KPLVTTRAMEHLHFRELPSG NVIVGIMVYSGYNQEDSLIMNQSA+DRGLFRSSFFRTL+DQEKA GRGMGDMAVLSAESFERPARENTAGMKHGNYDKLE+DGLVAPGTRVSGTDVLIGKTTPLGGG GV GGPGHRSKKDSSTVMRSHEDGIVDRVMLTTNQEGFKFCKV
Sbjct: 128 QGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGFNVIVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKA--GRGMGDMAVLSAESFERPARENTAGMKHGNYDKLEEDGLVAPGTRVSGTDVLIGKTTPLGGGVSGVTGGPGHRSKKDSSTVMRSHEDGIVDRVMLTTNQEGFKFCKV 395
BLAST of mRNA_H-paniculata_contig28569.7782.1 vs. uniprot
Match: D7FHZ3_ECTSI (DNA-directed RNA polymerase subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHZ3_ECTSI) HSP 1 Score: 511 bits (1315), Expect = 1.940e-169 Identity = 257/270 (95.19%), Postives = 263/270 (97.41%), Query Frame = 0
Query: 1 KGVVEYIDTEEEETTMIAMEPKDLEEAGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPMKPLVTTRAMEHLHFRELPSGVNVIVGIMVYSGYNQEDSLIMNQSAIDRGLFRSSFFRTLSDQEKASAGRGMGDMAVLSAESFERPARENTAGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLGGG-GGVMGGPGHRSKKDSSTVMRSHEDGIVDRVMLTTNQEGFKFCKV 269
+GVVEYIDTEEEETTM+AMEPKDLEE+GGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYP KPLVTTRAMEHLHFRELPSG NVIVGIMVYSGYNQEDSLIMNQSA+DRGLFRSSFFRTL+DQEKA GRGMGDMAVLSAESFERPARENTAGMKHGNYDKLE+DGLVAPGTRVSGTDVLIGKTTPLGGG GV GGPGHRSKKDSSTVMRSHEDGIVDRVMLTTNQEGFKFCKV
Sbjct: 748 QGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGFNVIVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKA--GRGMGDMAVLSAESFERPARENTAGMKHGNYDKLEEDGLVAPGTRVSGTDVLIGKTTPLGGGVAGVTGGPGHRSKKDSSTVMRSHEDGIVDRVMLTTNQEGFKFCKV 1015
BLAST of mRNA_H-paniculata_contig28569.7782.1 vs. uniprot
Match: A0A835YQ41_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ41_9STRA) HSP 1 Score: 428 bits (1100), Expect = 1.760e-138 Identity = 208/270 (77.04%), Postives = 240/270 (88.89%), Query Frame = 0
Query: 2 GVVEYIDTEEEETTMIAMEPKDLEEAGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPMKPLVTTRAMEHLHFRELPSGVNVIVGIMVYSGYNQEDSLIMNQSAIDRGLFRSSFFRTLSDQEKASAGRGMGDMAVLSAESFERPARENTAGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPL--GGGGGVMGGPGHRSKKDSSTVMRSHEDGIVDRVMLTTNQEGFKFCKV 269
GVVEY+DTEEEETTMIAM+P DL GGYS+TYTHCEIHPSMILG+CASIIPFPDHNQSPRNTYQSAMGKQAMG+YASNYQ+RMDTLAHVLHYPMKPLV TR+MEHLHFRELPSGVNV+V IM Y+GYNQEDSLIMNQSAIDRGLFRSS+FR++ D+EKA G G+G+MA+LSAE FERP ++ +G + G+YDKL+ DGLV+PGTRVSG+D++IGKTTPL GG GG+ G SK+DSST M++HE G +D+VMLTTNQEGFKFCKV
Sbjct: 662 GVVEYVDTEEEETTMIAMDPSDLAAGGGYSTTYTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGVYASNYQVRMDTLAHVLHYPMKPLVCTRSMEHLHFRELPSGVNVVVAIMCYTGYNQEDSLIMNQSAIDRGLFRSSYFRSIVDKEKA--GSGVGEMALLSAEQFERPNKDQCSGSRSGSYDKLDADGLVSPGTRVSGSDIIIGKTTPLAQGGAGGLTAGVNRFSKRDSSTAMKAHESGTIDQVMLTTNQEGFKFCKV 929
BLAST of mRNA_H-paniculata_contig28569.7782.1 vs. uniprot
Match: A0A7S4QFE0_9STRA (DNA-directed RNA polymerase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QFE0_9STRA) HSP 1 Score: 397 bits (1019), Expect = 4.660e-129 Identity = 196/269 (72.86%), Postives = 229/269 (85.13%), Query Frame = 0
Query: 1 KGVVEYIDTEEEETTMIAMEPKDLEEAGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPMKPLVTTRAMEHLHFRELPSGVNVIVGIMVYSGYNQEDSLIMNQSAIDRGLFRSSFFRTLSDQEKASAGRGMGDMAVLSAESFERPARENTAGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLGGGGGVMGGPGHRSKKDSSTVMRSHEDGIVDRVMLTTNQEGFKFCKV 269
+G+VEYIDTEEEETTMIAMEPKDLE YSSTYTHCEIHPSMILG+CASIIPFPDHNQSPRNTYQSAMGKQAMGIY+SNYQ+RMDT+AHVLHYP KPL TTRAME LHFRELPSGVN +V IMVY+GYNQEDSLIMNQSAIDRGLFRSS++R +DQEKAS+ +G + L++E+FE+P ++ GMKHG Y KL+DDGLV PG RVSG D+LIGKT PL G G+ GP +K+D ST M+++E+GIVD VM++T +EG+KF KV
Sbjct: 627 EGLVEYIDTEEEETTMIAMEPKDLESGDSYSSTYTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYSSNYQVRMDTMAHVLHYPQKPLCTTRAMEFLHFRELPSGVNCVVAIMVYTGYNQEDSLIMNQSAIDRGLFRSSYYRCYTDQEKASS---VGSIGSLTSETFEKPHMDSCRGMKHGEYGKLDDDGLVQPGARVSGDDILIGKTAPLDGTAGM--GPSRYTKRDCSTSMKANENGIVDNVMVSTTKEGYKFTKV 890
BLAST of mRNA_H-paniculata_contig28569.7782.1 vs. uniprot
Match: A0A6U0RQ91_9STRA (DNA-directed RNA polymerase subunit beta n=2 Tax=Biddulphiophycidae TaxID=33837 RepID=A0A6U0RQ91_9STRA) HSP 1 Score: 386 bits (991), Expect = 1.010e-127 Identity = 189/269 (70.26%), Postives = 226/269 (84.01%), Query Frame = 0
Query: 1 KGVVEYIDTEEEETTMIAMEPKDLEEAGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPMKPLVTTRAMEHLHFRELPSGVNVIVGIMVYSGYNQEDSLIMNQSAIDRGLFRSSFFRTLSDQEKASAGRGMGDMAVLSAESFERPARENTAGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLGGGGGVMGGPGHRSKKDSSTVMRSHEDGIVDRVMLTTNQEGFKFCKV 269
+G+VEY+DTEEEETTMIAMEP DL+ YSSTYTHCEIHPSMILG+CASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQ+RMDT+AHVLHYP KPL TTRAME LHFRELPSGVN +V IM+Y+GYNQEDSLI+NQSAIDRGLFRSS+FR SDQEKAS+ +G + L++E+FE+P+ +N GMKHG+Y KL++DGL+ GTRVSG D+LIGKT P+ G+ P +K+D ST M+S E GIVD V+++T +EG++F KV
Sbjct: 133 EGIVEYVDTEEEETTMIAMEPSDLDADESYSSTYTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVRMDTMAHVLHYPQKPLCTTRAMEFLHFRELPSGVNCVVAIMIYTGYNQEDSLILNQSAIDRGLFRSSYFRCYSDQEKASS---VGTIGSLTSETFEKPSFDNCRGMKHGDYGKLDEDGLIQSGTRVSGDDILIGKTAPMDSTAGM---PSKFTKRDCSTAMKSTESGIVDNVLISTTKEGYRFTKV 395
BLAST of mRNA_H-paniculata_contig28569.7782.1 vs. uniprot
Match: A0A1Z5JUL8_FISSO (DNA-directed RNA polymerase subunit beta n=3 Tax=Naviculales TaxID=38748 RepID=A0A1Z5JUL8_FISSO) HSP 1 Score: 397 bits (1020), Expect = 2.190e-127 Identity = 197/269 (73.23%), Postives = 229/269 (85.13%), Query Frame = 0
Query: 1 KGVVEYIDTEEEETTMIAMEPKDLEEAGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPMKPLVTTRAMEHLHFRELPSGVNVIVGIMVYSGYNQEDSLIMNQSAIDRGLFRSSFFRTLSDQEKASAGRGMGDMAVLSAESFERPARENTAGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLGGGGGVMGGPGHRSKKDSSTVMRSHEDGIVDRVMLTTNQEGFKFCKV 269
+G+VEYIDTEEEETTMIAMEPKDL+ YSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQ+RMDT+AHVLHYP KPL TTRAME LHFRELPSGVN +V IM+Y+GYNQEDSLIMNQSAIDRGLFRSS++R DQEKAS+ +G + L++E FE+PA +NT GMKHG Y KL+DDGLVAPGTRVSG DVLIGKT P+ G+ P +K+D ST M+++E+GIVD V+++T +EG++F KV
Sbjct: 592 EGLVEYIDTEEEETTMIAMEPKDLDATDAYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVRMDTMAHVLHYPQKPLCTTRAMEFLHFRELPSGVNCVVAIMIYTGYNQEDSLIMNQSAIDRGLFRSSYYRCYIDQEKASS---VGTIGSLTSELFEKPAMDNTRGMKHGEYGKLDDDGLVAPGTRVSGDDVLIGKTAPMDSTSGM---PSRYTKRDCSTSMKANENGIVDNVLISTTKEGYRFTKV 854
BLAST of mRNA_H-paniculata_contig28569.7782.1 vs. uniprot
Match: A0A7S1FRA3_9STRA (DNA-directed RNA polymerase subunit beta n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FRA3_9STRA) HSP 1 Score: 391 bits (1004), Expect = 4.820e-124 Identity = 199/271 (73.43%), Postives = 227/271 (83.76%), Query Frame = 0
Query: 2 GVVEYIDTEEEETTMIAMEPKDLEEA---GGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPMKPLVTTRAMEHLHFRELPSGVNVIVGIMVYSGYNQEDSLIMNQSAIDRGLFRSSFFRTLSDQEKASAGRGMGDMAVLSAESFERPARENTAGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLGGGGGVMGGPGHRSKKDSSTVMRSHEDGIVDRVMLTTNQEGFKFCKV 269
G+VEYIDTEEEETTMIAMEPKDLEE+ GGYSSTYTHCEIHP+MILG+CASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQ+RMDT+AHVLHYP KPL TTRAME LHFRELPSGVN IVGIM+Y+GYNQEDSLI+NQSAIDRGLFRSS+FR SDQEK G G L++E+FERP +N GMKHG Y KL++DGLV PG+RVSG D+LIGKT PL VM P +K+D ST M+S ++GIVD VM++T +EG++F KV
Sbjct: 719 GIVEYIDTEEEETTMIAMEPKDLEESRRGGGYSSTYTHCEIHPAMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVRMDTMAHVLHYPQKPLCTTRAMEFLHFRELPSGVNCIVGIMIYTGYNQEDSLILNQSAIDRGLFRSSYFRCYSDQEK-----GSGASNPLNSETFERPLHDNCRGMKHGEYGKLDEDGLVQPGSRVSGEDILIGKTAPLETN-SVM--PSRYTKRDCSTPMKSTDNGIVDNVMISTTKEGYRFTKV 981
BLAST of mRNA_H-paniculata_contig28569.7782.1 vs. uniprot
Match: A0A1E7ERG7_9STRA (DNA-directed RNA polymerase subunit beta n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A1E7ERG7_9STRA) HSP 1 Score: 387 bits (995), Expect = 4.290e-123 Identity = 191/269 (71.00%), Postives = 226/269 (84.01%), Query Frame = 0
Query: 1 KGVVEYIDTEEEETTMIAMEPKDLEEAGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPMKPLVTTRAMEHLHFRELPSGVNVIVGIMVYSGYNQEDSLIMNQSAIDRGLFRSSFFRTLSDQEKASAGRGMGDMAVLSAESFERPARENTAGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLGGGGGVMGGPGHRSKKDSSTVMRSHEDGIVDRVMLTTNQEGFKFCKV 269
+G+VEYIDTEEEETTM+AM+P DL YSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQ+RMDT+AHVLHYP KPL TTRAME LHFRELPSGVN IVGI+VY+GYNQEDSLIMNQSAIDRGLFRSS++R DQEKAS+ +G + L++E FE+P ++ T GMKHG Y KL++DGLVAPGTRVSG D+LIGKT P+ + P +K+D ST M+++E+GIVD V+++T +EG++F KV
Sbjct: 668 EGIVEYIDTEEEETTMVAMDPVDLNADESYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVRMDTMAHVLHYPQKPLCTTRAMEFLHFRELPSGVNCIVGILVYTGYNQEDSLIMNQSAIDRGLFRSSYYRCYIDQEKASS---VGTLGTLNSEIFEKPTQDKTRGMKHGEYGKLDEDGLVAPGTRVSGDDILIGKTAPMDSSTNM---PSRYTKRDCSTSMKANENGIVDNVLISTTKEGYRFTKV 930
BLAST of mRNA_H-paniculata_contig28569.7782.1 vs. uniprot
Match: B8C598_THAPS (DNA-directed RNA polymerase subunit beta n=2 Tax=Bacillariophyta TaxID=2836 RepID=B8C598_THAPS) HSP 1 Score: 387 bits (994), Expect = 6.200e-123 Identity = 192/271 (70.85%), Postives = 230/271 (84.87%), Query Frame = 0
Query: 1 KGVVEYIDTEEEETTMIAMEPKDLEEAGG--YSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPMKPLVTTRAMEHLHFRELPSGVNVIVGIMVYSGYNQEDSLIMNQSAIDRGLFRSSFFRTLSDQEKASAGRGMGDMAVLSAESFERPARENTAGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLGGGGGVMGGPGHRSKKDSSTVMRSHEDGIVDRVMLTTNQEGFKFCKV 269
+G+VEY+DTEEEETTMIAMEPKDL+ G YS+TYTHCEIHPSMILG+CASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQ+RMDT+AHVLHYP KPL TTRAME LHFRELPSGVNV+V IM+Y+GYNQEDSLIMNQSAIDRGLFRSS++R +DQEK+S+ +G + L++E FERPA +N GMK G+Y KL+DDGLV+PGTRVSG DVLIGKT P+ + P +K+D ST M+++E+GIVD V+++T +EG++F KV
Sbjct: 668 EGLVEYVDTEEEETTMIAMEPKDLDMTVGEPYSTTYTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVRMDTMAHVLHYPQKPLCTTRAMEFLHFRELPSGVNVVVAIMIYTGYNQEDSLIMNQSAIDRGLFRSSYYRCYNDQEKSSS---VGSVGALNSEFFERPAFDNCKGMKTGDYGKLDDDGLVSPGTRVSGDDVLIGKTAPMD---AIANTPSRYTKRDCSTSMKANENGIVDNVLISTTKEGYRFTKV 932
BLAST of mRNA_H-paniculata_contig28569.7782.1 vs. uniprot
Match: K0RD88_THAOC (DNA-directed RNA polymerase subunit beta n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RD88_THAOC) HSP 1 Score: 388 bits (996), Expect = 1.570e-122 Identity = 193/269 (71.75%), Postives = 229/269 (85.13%), Query Frame = 0
Query: 1 KGVVEYIDTEEEETTMIAMEPKDLEEAGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPMKPLVTTRAMEHLHFRELPSGVNVIVGIMVYSGYNQEDSLIMNQSAIDRGLFRSSFFRTLSDQEKASAGRGMGDMAVLSAESFERPARENTAGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLGGGGGVMGGPGHRSKKDSSTVMRSHEDGIVDRVMLTTNQEGFKFCKV 269
+G+VEY+DTEEEETTMIAMEPKDL E GYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRN YQSAMGKQAMGIYASNYQ+RMDT+AHVLHYP KPL TTRAME L FRELPSGVNV+V IM+Y+GYNQEDSLIMNQSAIDRGLFRSS++R +DQEKA++ +G + L++E+FE+P +NT GMK+G+Y+KL++DGLVAPGTRVSG DVLIGKTTP + P +K+D ST M++ E GIVD V+++T +EG++F KV
Sbjct: 739 EGLVEYVDTEEEETTMIAMEPKDLGE--GYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNVYQSAMGKQAMGIYASNYQVRMDTMAHVLHYPQKPLCTTRAMEFLKFRELPSGVNVVVAIMIYTGYNQEDSLIMNQSAIDRGLFRSSYYRCYNDQEKAAS---VGSVGALNSETFEKPTMDNTRGMKYGDYNKLDEDGLVAPGTRVSGDDVLIGKTTPTE---ALANAPSRYTKRDCSTSMKATESGIVDNVLISTTKEGYRFTKV 999 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig28569.7782.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig28569.7782.1 ID=prot_H-paniculata_contig28569.7782.1|Name=mRNA_H-paniculata_contig28569.7782.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=271bpback to top |