prot_H-paniculata_contig2811.7676.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2811.7676.1
Unique Nameprot_H-paniculata_contig2811.7676.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length415
Homology
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BLAST of mRNA_H-paniculata_contig2811.7676.1 vs. uniprot
Match: D8LQ12_ECTSI (Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ12_ECTSI)

HSP 1 Score: 236 bits (601), Expect = 4.900e-70
Identity = 249/438 (56.85%), Postives = 286/438 (65.30%), Query Frame = 0 
Query:    5 RLRMRSGNGLCAITDDECSVVVKPDPVVAMVVTKKPPLVGGVIATDMTGELTPHGSECGDRVSRSNSIAELTPTWTLSALQRLSVEEQTTLGRKLGGAGPVAR------------------------NKSGTSPEPTA------DSPFRVVLQNAVVQGDLEAAAAALKSGADPNERDDLRHSSLHFAASRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASTQTGAEAGKRKTFQQMAKLLGPSALVARDELEQTPLHVAASCGNRDAVAVLLELNADPEAKDRKGHCPGHSWLRQVSKRARADILSALEAAIDRRNAQAAAAAAADDESWPDSGGDARVNVPLEEQSRASSVCLEAAPVLRPSVLNLLP-AGWGLGGSRKC-GEGGVARGEASFGIDTIGVSC 410
            R RM SG G+ AI D             A   TK     G  IAT++TGE+TP GS C       +S  ELT T  LSALQRLSVE+QTTL RKLG                               +K G   +  A      DSPFRVVLQ AVV+ DL+AA AAL+SGADPNERDDL HSSLHFAA++XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASTQ    A ++ TF+QMA+LLGPSAL+ARDEL+QTPLHVAASCGNR AV+VLLELNADPEA DRKG   G S+LRQV++RARADI ++L AA++R +A  A A   DD+   D GG   +   ++  +  +S C  A PV +PS+L+LL   GWG        G GG   GE SF      VSC
Sbjct:    9 RQRMISGYGMLAIEDP------------APAATKA---AGEPIATELTGEITPSGSACE---GEEDSEGELTRT--LSALQRLSVEDQTTLRRKLGAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSKEGKGEQGMAALGVPADSPFRVVLQKAVVESDLDAARAALRSGADPNERDDLCHSSLHFAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASTQ----ACEKDTFRQMAELLGPSALLARDELQQTPLHVAASCGNRGAVSVLLELNADPEATDRKGRVAGQSFLRQVTRRARADIRASLAAAVERIHAPPADAE--DDDLDADGGGLPPMPGGMKRATSTAS-CESAEPVRKPSMLSLLQIGGWGXXXXXDASGRGG---GETSFSGTPAVVSC 416
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2811.7676.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ12_ECTSI4.900e-7056.85Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ12... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 260..289
e-value: 0.0049
score: 26.1
coord: 187..217
e-value: 4.3E-4
score: 29.6
coord: 154..183
e-value: 1.4
score: 18.0
coord: 121..150
e-value: 930.0
score: 5.2
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 260..292
score: 11.861
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 154..186
score: 10.419
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 187..219
score: 12.876
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 235..337
e-value: 1.1E-10
score: 43.1
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 104..234
e-value: 7.8E-30
score: 105.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 119..299
NoneNo IPR availablePFAMPF13857Ank_5coord: 251..294
e-value: 2.1E-6
score: 27.9
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 244..299
coord: 124..230
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 126..215
e-value: 5.5E-12
score: 46.1
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 126..299
score: 37.958

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2811contigH-paniculata_contig2811:6522..10007 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2811.7676.1mRNA_H-paniculata_contig2811.7676.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2811 6238..10185 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2811.7676.1 ID=prot_H-paniculata_contig2811.7676.1|Name=mRNA_H-paniculata_contig2811.7676.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=415bp
MDARRLRMRSGNGLCAITDDECSVVVKPDPVVAMVVTKKPPLVGGVIATD
MTGELTPHGSECGDRVSRSNSIAELTPTWTLSALQRLSVEEQTTLGRKLG
GAGPVARNKSGTSPEPTADSPFRVVLQNAVVQGDLEAAAAALKSGADPNE
RDDLRHSSLHFAASRGDVRCLRKLMRSGARANVANNVGWSPLHYAVLGGH
VEVVEVLLRAGAYPCFRDNHLISPLHLASTQTGAEAGKRKTFQQMAKLLG
PSALVARDELEQTPLHVAASCGNRDAVAVLLELNADPEAKDRKGHCPGHS
WLRQVSKRARADILSALEAAIDRRNAQAAAAAAADDESWPDSGGDARVNV
PLEEQSRASSVCLEAAPVLRPSVLNLLPAGWGLGGSRKCGEGGVARGEAS
FGIDTIGVSCASRV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom