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Homology
BLAST of mRNA_H-paniculata_contig2811.7676.1 vs. uniprot
Match: D8LQ12_ECTSI (Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ12_ECTSI) HSP 1 Score: 237 bits (604), Expect = 1.070e-68 Identity = 249/443 (56.21%), Postives = 288/443 (65.01%), Query Frame = 3
Query: 282 NMDARRLRMRSGNGLCAITDDECSVVVKPDPVVAMVVTKKPPLVGGVIATDMTGELTPHGSECGDRVSRSNSIAELTPTWTLSALQRLSVEEQTTLGRKLGGAGPVAR------------------------NKSGTSPEPTA------DSPFRVVLQNAVVQGDLEAAAAALKSGADPNERDDLRHSSLHFAASRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASTQTGAEAGKRKTFQQMAKLLGPSALVARDELEQTPLHVAASCGNRDAVAVLLELNADPEAKDRKGHCPGHSWLRQVSKRARADILSALEAAIDRRNAQAAAAAAADDESWPDSGGDARVNVPLEEQSRASSVCLEAAPVLRPSVLNLLP-AGWGLGGSRKC-GEGGVARGEASFGIDTIGVSC 1514
++ R RM SG G+ AI D A TK G IAT++TGE+TP GS C +S ELT T LSALQRLSVE+QTTL RKLG +K G + A DSPFRVVLQ AVV+ DL+AA AAL+SGADPNERDDL HSSLHFAA++XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASTQ A ++ TF+QMA+LLGPSAL+ARDEL+QTPLHVAASCGNR AV+VLLELNADPEA DRKG G S+LRQV++RARADI ++L AA++R +A A A DD+ D GG + ++ + +S C A PV +PS+L+LL GWG G GG GE SF VSC
Sbjct: 4 SLSEARQRMISGYGMLAIEDP------------APAATKA---AGEPIATELTGEITPSGSACE---GEEDSEGELTRT--LSALQRLSVEDQTTLRRKLGAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSKEGKGEQGMAALGVPADSPFRVVLQKAVVESDLDAARAALRSGADPNERDDLCHSSLHFAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASTQ----ACEKDTFRQMAELLGPSALLARDELQQTPLHVAASCGNRGAVSVLLELNADPEATDRKGRVAGQSFLRQVTRRARADIRASLAAAVERIHAPPADAE--DDDLDADGGGLPPMPGGMKRATSTAS-CESAEPVRKPSMLSLLQIGGWGXXXXXDASGRGG---GETSFSGTPAVVSC 416
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 240.4 |
| Seed ortholog evalue | 1.6e-60 |
| Seed eggNOG ortholog | 2880.D8LQ12 |
| Hectar predicted targeting category | other localisation |
| EggNOG free text desc. | response to abiotic stimulus |
| EggNOG OGs | COG0666@1,KOG4177@2759 |
| Ec32 ortholog description | Ankyrin repeat-containing domain |
| Ec32 ortholog | Ec-15_001350.1 |
| COG Functional cat. | G |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Exons | 4 |
| Model size | 1707 |
| Cds size | 1245 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2811.7676.1 >prot_H-paniculata_contig2811.7676.1 ID=prot_H-paniculata_contig2811.7676.1|Name=mRNA_H-paniculata_contig2811.7676.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=415bp
MDARRLRMRSGNGLCAITDDECSVVVKPDPVVAMVVTKKPPLVGGVIATD
MTGELTPHGSECGDRVSRSNSIAELTPTWTLSALQRLSVEEQTTLGRKLG
GAGPVARNKSGTSPEPTADSPFRVVLQNAVVQGDLEAAAAALKSGADPNE
RDDLRHSSLHFAASRGDVRCLRKLMRSGARANVANNVGWSPLHYAVLGGH
VEVVEVLLRAGAYPCFRDNHLISPLHLASTQTGAEAGKRKTFQQMAKLLG
PSALVARDELEQTPLHVAASCGNRDAVAVLLELNADPEAKDRKGHCPGHS
WLRQVSKRARADILSALEAAIDRRNAQAAAAAAADDESWPDSGGDARVNV
PLEEQSRASSVCLEAAPVLRPSVLNLLPAGWGLGGSRKCGEGGVARGEAS
FGIDTIGVSCASRV* back to topmRNA from alignment at H-paniculata_contig2811:6238..10185+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2811.7676.1 ID=mRNA_H-paniculata_contig2811.7676.1|Name=mRNA_H-paniculata_contig2811.7676.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3948bp|location=Sequence derived from alignment at H-paniculata_contig2811:6238..10185+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGTCCACCTGAACAAAACATACACCCTCCAACGCGTCTTTGGCTTCCGGC
CACAGCTTTCCAAACTTTACAACAGTGGGTTCGTTTAGTGCCCACCAGGC
AGAGCTTGTCCCCTCACAGAGTTCGCACTTTCCACATCCCATCTCCGTTG
TGGTCATCACCCTCGCAACTCGTTCCAGGCGCTCGCAGGGTGTGCAGTCC
AGTCTGATACCACAGGACACTAACGAGCAGGCGCGGGTGGAACAAACCAA
ACAACGAACATAGTGATCGGCTGAGCTTTTCAACATGGATGCTAGGAGAC
TTCGGATGCGCTCCGGTAACGGGCTCTGCGCCATCACAGACGATGAGTGC
AGCGTCGTCGTCAAACCTGACCCTGTAGTAGCCATGGTGGTGACTAAGAA
ACCACCATTGGTGGGTGGGGTGATCGCTACCGATATGACCGGTGAGCTCA
CGCCGCACGGGTCGGAGTGCGGCGACCGCGTGAGCAGGAGTAATTCGATC
GCTGAGCTCACACCCACATGGACGCTGTCGGCATTGCAGCGCTTATCTGT
GGAGGAGCAGACAACCCTGGGGCGAAAACTGGGCGGCGCAGGGCCGGTAG
CCCGAAACAAGTCTGGCACTTCGCCAGAGCCTACAGCGGACTCTCCCTTC
CGAGTGGTGCTTCAAAACGCGGTGGTGCAGGGCGACCTGGAGGCTGCCGC
TGCTGCTCTAAAGTCCGGAGCAGATCCGAATGAGCGCGATGACTTGCGAC
ATAGTTCTCTGCATTTTGCGGCTTCTAGGGGAGACGTACGGTGCTTGCGG
AAGTTGATGAGGTCGGGTGCACGGGCAAACGTCGCAAACAACGTGAGGAA
CTTGTCTGGCATTCAACGGAAAATTGAGGTGGTGGTAAGAGGGAGGGGGG
GGGGGTACAGTCATATTGCTACTGTTGGCGTGGGTGTGGTGATGAGTGTG
AGGGTGTTCTATTTTGCTCTGGCTTTGTGCTGGTTTGCTGTTGCAAGCCC
ACTGGCGACAAGGACAAAGGGACATGTCAGCAGCGTGTCATTTTTTTTTA
CCAGTTTTGAGTTGAGGTTTTAAATATTTCGCGGTTAGATCATTCAAAAG
TGAAATGAGGGCAGTTGACGTACGATTTTTCATTTTTCACTCGCACATGA
AATGCTTGATCTCGAACCCAACACCGTGCGCACTTCCTGTCCCCTGTGCT
TCCTTGACAGCTCTGCTTTACTGACTGTCGTGTTATTTCTCTGAACACAT
GTATCCCCTTTTGAATCTTTGTTGACCCCCTCATCCTTGCGGTGATATTT
GGTACGATCGTTGTGTGCAGTTTCTCGTAAGTCAAAGGCGCGGATCTTTA
ATAAATAAGTCAGTCCATGGACAATATGTATGTACGTGCATGAGATTTGG
TTCCGTTGTCGTTATCTCGAAGTTGTGGATGCTTGCTGTGTACATCAAGT
AGTACACACATGTGGTAAATAATATATGTTGTTACTTGAAACATGGTTAC
GTTCCATGTTGTGCAATCCGAACACCTAGGTCGGATGGAGTCCCCTGCAC
TACGCTGTTCTGGGCGGGCATGTTGAGGTGGTGGAGGTATTGCTGCGTGC
TGGCGCATACCCGTGCTTCCGAGACAACCACTTGATCTCGCCCCTGCACT
TGGCCTCCACTCAAACTGGGGCGGAAGCGGGGAAGCGAAAGACTTTTCAG
CAAATGGCGAAGCTTCTGGGCCCTTCAGCCCTTGTTGCACGGGATGAGGT
GAGAATAGTATAATCAAACTCTTCGAGTAGTGATATAGTCACGGCAGCAA
GAGACAGAGACCTCTCATGTGTTGACTCGGTCCCTCCCTTCTTGGGTCTG
TTTTTTCCTTGACGCTGGTGTTAATACCGAATCATTCATTAAACACTAGT
CACAAACGAATGACACCAAGAGCACATCTTGTTCAAGAGTCTGAACAGTC
GCATTATATGCAGAATGTTTATATAGAAAGCACTTTGGCACGCGCATACA
TTCACGTCAATGGATATGCACTGTGCTCTGTCTGAAGAGTAGGACGCAAT
GGAAGGGATTACATTCTACGGATAAGGAACACTTAGATGGGGGAAAATTT
CTTGTATTCAACTACGGCTATAGCCTGTTACGTTTCTCCGCATGAAATGA
GTTATTCCTTGAAATTGGGTATATGCGTGAATGCCCGGGCGTGCAGACGC
AGCCTGTTCTGCCTTATCTCTAGCTGCGTCGTTGTGTCCACGGGTGTCTA
GGTCGTCTGTCCGTCACCGGGGTTGCTGAATGTCATGTTAAAACAAAGTT
TCTTTTCGTGTGGTGTGTGTGTACTAACCGTCACGTTGGTACCACAGTCG
AGACTACAGATAATACGTACTTGATTCGTGAGCGTCGTGTTTTATTGGTG
GTTACAGTATAGATATGGTGACTTAGCCGGATATTGAGACATGCAACACA
GAGCTAATTCTACGCACACGAGGATGCCCGACAATTGTACATGCTACTGG
CTGTACGGTAGACAGTTGTTGCAAATAATATACATGTGTCTGTACTAATC
GAATTCTGTTCATCTTCATTTTCTCCACTCCCCAGGAATGATGTCTACAC
GTGAGGTAGACGCATGCAGTGCAATATAACGACCAAAAGTCGTTGATTGG
ACCATAATTGAATGTGCCGCTCAGAACATGTTCTGCCAAGACTTGCGCTA
TTCGGACCATATACGTGAAAATCGCCACGGAAGATTTCATCTTTTGTGTC
TGTTTTCCCTGAGTGGTAAATAGTACAACTTTCTTTCTGTAGCCTGCAGG
TACCATGACAAACGCATCATATTACTCGTTTGATGGTGTTTTCTTTTCTC
AGTAATATATCAAAATTCTTTTTTCTTTCATGTGTTGCCTGATGTCTGAA
CCCTGGTCCTTTCCCAAGTCGGGTCCGTGAACTCTTTGATGAGCTCAGGT
CCCTTCACATCCATGTGTGGTCTTGTTTCACCCACCTGAAACTCCATCAG
GCCTGACTTGATTCACTACAGTCCCTTCGTACGTCGTTGGCCAGGACTCG
AGGACAATCCTAATGTCTGGCCATTTGACCCTTGTTTTTCACGTAATTGT
GAATCAGGTGTTGCCCCTAACTAACATAAATGAATAACATGATACATCCT
AGAACTAACCACTGACCCCCCACTCTCCTATTCTTCCTGTCGCCCCCCCC
GTTTTCCCTCCCTATATGTCCGTCCAACTAATCCACTACGCTGGAAAAAA
TCAGCTCGAGCAAACGCCTCTTCACGTCGCCGCATCCTGTGGTAACCGTG
ACGCAGTCGCCGTCCTCCTGGAGCTCAACGCGGACCCGGAAGCGAAGGAC
CGCAAGGGCCATTGTCCGGGTCATTCCTGGCTCCGGCAGGTCTCCAAGCG
CGCGCGCGCGGACATCCTCAGTGCTCTCGAGGCAGCAATAGATCGTCGTA
ATGCTCAAGCCGCGGCGGCAGCGGCAGCGGACGATGAGGTTAATCCTTGC
CCGTCGTCATCGTTATCTCCCGACAACTCTCCGAAGTCGTGGCCAGACAG
TGGCGGCGATGCGCGAGTTAATGTTCCGTTGGAAGAGCAGTCACGTGCCT
CTAGCGTATGCTTAGAGGCTGCCCCCGTGCTACGGCCGTCGGTGCTGAAC
TTGTTACCGGCTGGGTGGGGGCTGGGCGGGAGTAGGAAATGTGGGGAAGG
AGGTGTTGCCCGCGGTGAAGCATCTTTCGGGATCGACACAATAGGGGTTT
CTTGCGCTTCTAGGGTATGATGTTTTAGAGAAGATGTAGGGGAGGGGGGA
AGGACAGAGATATGGGTTGTGGCGAGTTTTGGGTAGTGAGCGGTGGTTGT
GGTGCCTGTGTCTGTATGCAATAGATACGTGTATTTCGTTTCATGTAAAA
TGTCGCCCGTCTGTTCGTCCGGTGCCGTATTTCAGAGGAAGAACAGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig2811:6238..10185+ >mRNA_H-paniculata_contig2811.7676.1 ID=mRNA_H-paniculata_contig2811.7676.1|Name=mRNA_H-paniculata_contig2811.7676.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2490bp|location=Sequence derived from alignment at H-paniculata_contig2811:6238..10185+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGATGCTAGGAGACTTCGGATGCGCTCCGGTAACGGGCTCTGCGCCAT
CACAGACGATGAGTGCAGCGTCGTCGTCAAACCTGACCCTGTAGTAGCCA
TGGTGGTGACTAAGAAACCACCATTGGTGGGTGGGGTGATCGCTACCGAT
ATGACCGGTGAGCTCACGCCGCACGGGTCGGAGTGCGGCGACCGCGTGAG
CAGGAGTAATTCGATCGCTGAGCTCACACCCACATGGACGCTGTCGGCAT
TGCAGCGCTTATCTGTGGAGGAGCAGACAACCCTGGGGCGAAAACTGGGC
GGCGCAGGGCCGGTAGCCCGAAACAAGTCTGGCACTTCGCCAGAGCCTAC
AGCGGACTCTCCCTTCCGAGTGGTGCTTCAAAACGCGGTGGTGCAGGGCG
ACCTGGAGGCTGCCGCTGCTGCTCTAAAGTCCGGAGCAGATCCGAATGAG
CGCGATGACTTGCGACATAGTTCTCTGCATTTTGCGGCTTCTAGGGGAGA
CGTACGGTGCTTGCGGAAGTTGATGAGGTCGGGTGCACGGGCAAACGTCG
CAAACAACATGGATGCTAGGAGACTTCGGATGCGCTCCGGTAACGGGCTC
TGCGCCATCACAGACGATGAGTGCAGCGTCGTCGTCAAACCTGACCCTGT
AGTAGCCATGGTGGTGACTAAGAAACCACCATTGGTGGGTGGGGTGATCG
CTACCGATATGACCGGTGAGCTCACGCCGCACGGGTCGGAGTGCGGCGAC
CGCGTGAGCAGGAGTAATTCGATCGCTGAGCTCACACCCACATGGACGCT
GTCGGCATTGCAGCGCTTATCTGTGGAGGAGCAGACAACCCTGGGGCGAA
AACTGGGCGGCGCAGGGCCGGTAGCCCGAAACAAGTCTGGCACTTCGCCA
GAGCCTACAGCGGACTCTCCCTTCCGAGTGGTGCTTCAAAACGCGGTGGT
GCAGGGCGACCTGGAGGCTGCCGCTGCTGCTCTAAAGTCCGGAGCAGATC
CGAATGAGCGCGATGACTTGCGACATAGTTCTCTGCATTTTGCGGCTTCT
AGGGGAGACGTACGGTGCTTGCGGAAGTTGATGAGGTCGGGTGCACGGGC
AAACGTCGCAAACAACGTCGGATGGAGTCCCCTGCACTACGCTGTTCTGG
GCGGGCATGTTGAGGTGGTGGAGGTATTGCTGCGTGCTGGCGCATACCCG
TGCTTCCGAGACAACCACTTGATCTCGCCCCTGCACTTGGCCTCCACTCA
AACTGGGGCGGAAGCGGGGAAGCGAAAGACTTTTCAGCAAATGGCGAAGC
TTCTGGGCCCTTCAGCCCTTGTTGCACGGGATGAGGTCGGATGGAGTCCC
CTGCACTACGCTGTTCTGGGCGGGCATGTTGAGGTGGTGGAGGTATTGCT
GCGTGCTGGCGCATACCCGTGCTTCCGAGACAACCACTTGATCTCGCCCC
TGCACTTGGCCTCCACTCAAACTGGGGCGGAAGCGGGGAAGCGAAAGACT
TTTCAGCAAATGGCGAAGCTTCTGGGCCCTTCAGCCCTTGTTGCACGGGA
TGAGCTCGAGCAAACGCCTCTTCACGTCGCCGCATCCTGTGGTAACCGTG
ACGCAGTCGCCGTCCTCCTGGAGCTCAACGCGGACCCGGAAGCGAAGGAC
CGCAAGGGCCATTGTCCGGGTCATTCCTGGCTCCGGCAGGTCTCCAAGCG
CGCGCGCGCGGACATCCTCAGTGCTCTCGAGGCAGCAATAGATCGTCGTA
ATGCTCAAGCCGCGGCGGCAGCGGCAGCGGACGATGAGCTCGAGCAAACG
CCTCTTCACGTCGCCGCATCCTGTGGTAACCGTGACGCAGTCGCCGTCCT
CCTGGAGCTCAACGCGGACCCGGAAGCGAAGGACCGCAAGGGCCATTGTC
CGGGTCATTCCTGGCTCCGGCAGGTCTCCAAGCGCGCGCGCGCGGACATC
CTCAGTGCTCTCGAGGCAGCAATAGATCGTCGTAATGCTCAAGCCGCGGC
GGCAGCGGCAGCGGACGATGAGTCGTGGCCAGACAGTGGCGGCGATGCGC
GAGTTAATGTTCCGTTGGAAGAGCAGTCACGTGCCTCTAGCGTATGCTTA
GAGGCTGCCCCCGTGCTACGGCCGTCGGTGCTGAACTTGTTACCGGCTGG
GTGGGGGCTGGGCGGGAGTAGGAAATGTGGGGAAGGAGGTGTTGCCCGCG
GTGAAGCATCTTTCGGGATCGACACAATAGGGGTTTCTTGCGCTTCTAGG
GTATGATCGTGGCCAGACAGTGGCGGCGATGCGCGAGTTAATGTTCCGTT
GGAAGAGCAGTCACGTGCCTCTAGCGTATGCTTAGAGGCTGCCCCCGTGC
TACGGCCGTCGGTGCTGAACTTGTTACCGGCTGGGTGGGGGCTGGGCGGG
AGTAGGAAATGTGGGGAAGGAGGTGTTGCCCGCGGTGAAGCATCTTTCGG
GATCGACACAATAGGGGTTTCTTGCGCTTCTAGGGTATGA back to top
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