prot_H-paniculata_contig27254.7458.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig27254.7458.1
Unique Nameprot_H-paniculata_contig27254.7458.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length200
Homology
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BLAST of mRNA_H-paniculata_contig27254.7458.1 vs. uniprot
Match: D7FH38_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FH38_ECTSI)

HSP 1 Score: 134 bits (337), Expect = 7.630e-33
Identity = 62/70 (88.57%), Postives = 64/70 (91.43%), Query Frame = 0 
Query:    1 RLLEAGVNGPYDRPRDPRMRRHTLLHVASACGNTEPGEKGYTPLHRAALGGHGEVARKLIKAGADKDART 70
            RLLEAGVNGPYDRPRDPR RRHTLLH++SACGNTEP EK YTPLHRA LGGH EVAR LIKAGADKDART
Sbjct:   84 RLLEAGVNGPYDRPRDPRFRRHTLLHLSSACGNTEPSEKAYTPLHRAVLGGHSEVARVLIKAGADKDART 153
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27254.7458.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FH38_ECTSI7.630e-3388.57Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 40..55
score: 46.8
coord: 89..103
score: 37.07
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 73..102
e-value: 2.0E-4
score: 30.7
coord: 39..68
e-value: 1.5E-4
score: 31.1
coord: 173..199
e-value: 40.0
score: 13.1
coord: 140..169
e-value: 0.0035
score: 26.6
coord: 107..136
e-value: 0.075
score: 22.2
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 140..172
score: 10.579
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 107..139
score: 11.354
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 173..199
score: 10.312
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 73..105
score: 13.25
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 39..71
score: 13.25
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 102..199
e-value: 1.9E-27
score: 97.8
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..101
e-value: 3.2E-20
score: 74.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 19..197
NoneNo IPR availablePFAMPF13637Ank_4coord: 143..188
e-value: 1.3E-9
score: 38.4
NoneNo IPR availablePANTHERPTHR24121:SF2NO MECHANORECEPTOR POTENTIAL C, ISOFORM Hcoord: 72..195
NoneNo IPR availablePANTHERPTHR24121NO MECHANORECEPTOR POTENTIAL C, ISOFORM D-RELATEDcoord: 37..165
NoneNo IPR availablePANTHERPTHR24121NO MECHANORECEPTOR POTENTIAL C, ISOFORM D-RELATEDcoord: 72..195
NoneNo IPR availablePANTHERPTHR24121:SF2NO MECHANORECEPTOR POTENTIAL C, ISOFORM Hcoord: 37..165
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 44..138
e-value: 2.9E-16
score: 59.8
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 39..199
score: 51.276

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig27254contigH-paniculata_contig27254:612..3266 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig27254.7458.1mRNA_H-paniculata_contig27254.7458.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig27254 612..3266 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig27254.7458.1 ID=prot_H-paniculata_contig27254.7458.1|Name=mRNA_H-paniculata_contig27254.7458.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=200bp
RLLEAGVNGPYDRPRDPRMRRHTLLHVASACGNTEPGEKGYTPLHRAALG
GHGEVARKLIKAGADKDARTGGSGATPMHLAARKGHEACVRTLLLTGADR
DARRNLDGATPLHQASFFGQVGAVRALLHGVANPNAQDAEGCSPIFLAAQ
EGHEEVVVDLLANGASPDLSREDGWTPLHAAARFGHASTALSLLNEGVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom