prot_H-paniculata_contig26646.7281.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig26646.7281.1
Unique Nameprot_H-paniculata_contig26646.7281.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length185
Homology
BLAST of mRNA_H-paniculata_contig26646.7281.1 vs. uniprot
Match: A0A6H5J897_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J897_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 8.180e-38
Identity = 79/190 (41.58%), Postives = 115/190 (60.53%), Query Frame = 0
Query:    1 MSAPTQQHLVAVKRSFRYLQGHPDVPITYSRCEPKLLRYSDASYC-------TRSTTGTMFFFANGLVHFSSRLQKITATSTTETELIALATCAKQGIYLLGICRELGLQLTSCEVRSDNRGALHLAANSNYSSRSKHITIRFAALKDRIRRHQLIIDHVPSTNQLADILTKYCERVVFAQLRSKILTFG 183
            M+ PT QH+V  KR  RYL+G PD+P+ + R +  L  Y DAS+         RS+TG +F  A G+V  +S LQK+TA S+   E+IA+AT A++ IYL G+  ELG    +  + SD+ GA+  A NS +  RSK I+ R+  L+  + +  +++  V S  QLADILTK+ ERV F +LR+ +   G
Sbjct:  514 MNKPTNQHMVGAKRVLRYLRGCPDMPLKFRRGQWDLKCYCDASFAGSSERLQKRSSTGYIFILAGGVVSAASTLQKLTAQSSVHAEIIAMATAAREAIYLQGVLSELGFPCGNIPIHSDSTGAMSTAGNSMFRGRSKFISTRYWLLRQNVNKGNIVLKFVRSEEQLADILTKHLERVQFVKLRTLVQEHG 703          
BLAST of mRNA_H-paniculata_contig26646.7281.1 vs. uniprot
Match: A0A6H5KC04_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC04_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 6.580e-34
Identity = 68/182 (37.36%), Postives = 109/182 (59.89%), Query Frame = 0
Query:    4 PTQQHLVAVKRSFRYLQGHPDVPITYSRCEPKLLRYSDASYCT-----RSTTGTMFFFANGLVHFSSRLQKITATSTTETELIALATCAKQGIYLLGICRELGLQ-LTSCEVRSDNRGALHLAANSNYSSRSKHITIRFAALKDRIRRHQLIIDHVPSTNQLADILTKYCERVVFAQLRSKI 179
            P Q H+ A K   RYL+G PD+PI Y + + +L  ++D+S+       RSTTG +FF   GL+ + ++ Q + A +T E EL AL+  A++ +Y+     E+G +   S  + SD+ GAL +A+N+ +SSR+KHI +RF  L++  + H++ + H PS   LADI TK+  +  FA +   I
Sbjct:  111 PAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHLPKQRFATIMQLI 292          
BLAST of mRNA_H-paniculata_contig26646.7281.1 vs. uniprot
Match: A0A6H5JRF1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF1_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 1.260e-33
Identity = 76/185 (41.08%), Postives = 111/185 (60.00%), Query Frame = 0
Query:    7 QHLVAVKRSFRYLQGHPDVPITYSRCEPKLLR-YSDASYC-------TRSTTGTMFFFANGLVHFSSRLQKITATSTTETELIALATCAKQGIYLLGICRELGLQLTSCEVRSDNRGALHLAANSNYSSRSKHITIRFAALKDRIRRHQLIIDHVPSTNQLADILTKYCERVVFAQLRSKILTFG 183
            QH+V  KR  RYLQG PD+ + + R +   L+ Y DAS+         RS+TG +F  A G+V  +S LQK+TA S+   E+IA+AT A++ IYL G+  ELG    +  + SD+ GA+  A NS +  RSK I+ R+  L+  + +  +++  V S  QLADILTK+ ERV F +LR+ +   G
Sbjct:  336 QHMVGAKRVLRYLQGCPDMRLKFRRGQWGDLKCYCDASFAGSSERLQKRSSTGYIFILAGGVVSAASTLQKLTAQSSVHAEIIAMATAAREAIYLQGVLSELGFPCGNILIHSDSTGAMSTAGNSMFRGRSKFISTRYWLLRQNVNKGNIVLKFVRSEEQLADILTKHLERVQFVKLRTLVQEHG 520          
BLAST of mRNA_H-paniculata_contig26646.7281.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 130 bits (327), Expect = 9.150e-32
Identity = 68/182 (37.36%), Postives = 109/182 (59.89%), Query Frame = 0
Query:    4 PTQQHLVAVKRSFRYLQGHPDVPITYSRCEPKLLRYSDASYCT-----RSTTGTMFFFANGLVHFSSRLQKITATSTTETELIALATCAKQGIYLLGICRELGLQ-LTSCEVRSDNRGALHLAANSNYSSRSKHITIRFAALKDRIRRHQLIIDHVPSTNQLADILTKYCERVVFAQLRSKI 179
            P Q H+ A K   RYL+G PD+PI Y + + +L  ++D+S+       RSTTG +FF   GL+ + ++ Q + A +T E EL AL+  A++ +Y+     E+G +   S  + SD+ GAL +A+N+ +SSR+KHI +RF  L++  + H++ + H PS   LADI TK+  +  FA +   I
Sbjct:  548 PAQVHMAAAKHLLRYLRGTPDLPIVYKKGKFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHLPKQRFATIMQLI 729          
BLAST of mRNA_H-paniculata_contig26646.7281.1 vs. uniprot
Match: A0A6H5K4S9_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4S9_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 1.390e-31
Identity = 67/176 (38.07%), Postives = 107/176 (60.80%), Query Frame = 0
Query:    4 PTQQHLVAVKRSFRYLQGHPDVPITYSRCEPKLLRYSDASYCT-----RSTTGTMFFFANGLVHFSSRLQKITATSTTETELIALATCAKQGIYLLGICRELGLQ-LTSCEVRSDNRGALHLAANSNYSSRSKHITIRFAALKDRIRRHQLIIDHVPSTNQLADILTKYCERVVFA 173
            P Q H+ A K   RYL+G PD+PI Y + + +L  ++D+S+       RSTTG +FF   GL+ + ++ Q + A +T E EL AL+  A++ +Y+     E+G +   S  + SD+ GAL +A+N+ +SSR+KHI +RF  L++  + H++ + H PS   LADI TK+  +  FA
Sbjct:  707 PAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHLPKQRFA 882          
BLAST of mRNA_H-paniculata_contig26646.7281.1 vs. uniprot
Match: A0A6H5JV56_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV56_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 1.890e-31
Identity = 73/173 (42.20%), Postives = 111/173 (64.16%), Query Frame = 0
Query:    1 MSAPTQQHLVAVKRSFRYLQGHPDVPITY---SRCEPKLLRYSDASYCT----RSTTGTMFFFANGLVHFSSRLQKITATSTTETELIALATCAKQGIYLLGICRELGL-QLTSCEVRSDNRGALHLAANSNYSSRSKHITIRFAALKDRIRRHQLIIDHVPSTNQLADILTK 165
            MS+P + HL  +K  FRYL+  P++ + Y   SR E  L  YSDASY +    +S TG+M F A  L++FSSR+Q+I A S++E E   + + AK G+Y   +  ELG  QL   ++ +D R AL L +N  +S+RS+HI++R+ AL+  +   ++ +DHVPS++ L+DILTK
Sbjct:  693 MSSPREGHLANIKSIFRYLRKRPNLSLVYRKDSRFE--LPCYSDASYASTKDYKSVTGSMVFLAGDLIYFSSRVQRIVAQSSSEGEFFTINSTAKHGVYFSSLMGELGWSQLLKFKLLTDTRSALSLFSNGTFSNRSRHISVRYEALRGWVSSSRIALDHVPSSHMLSDILTK 863          
BLAST of mRNA_H-paniculata_contig26646.7281.1 vs. uniprot
Match: A0A6H5K8X2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8X2_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 4.160e-30
Identity = 65/178 (36.52%), Postives = 104/178 (58.43%), Query Frame = 0
Query:    4 PTQQHLVAVKRSFRYLQGHPDVPITYSRCEPKLLRYSDASYCT-----RSTTGTMFFFANGLVHFSSRLQKITATSTTETELIALATCAKQGIYLLGICRELGLQ-LTSCEVRSDNRGALHLAANSNYSSRSKHITIRFAALKDRIRRHQLIIDHVPSTNQLADILTKYCERVVFAQL 175
            P Q H+ A K   RYL+G PD+PI Y + + +L  ++D+S+       RSTTG +F    GL+ + ++ Q + A +T E EL AL+  A + +Y+     E+G +   S  + SD+ GAL +A+N+ +SSR+KHI   F  L++  + H++ + H PS   LADI TK+  +  FA +
Sbjct:   90 PAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDIGRSTTGYLFCVGGGLIGYGAKAQTLAAQNTVEVELQALSFSACEAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIRFFFFFLRELTKGHRITLHHQPSATMLADIATKHLPKQRFATI 267          
BLAST of mRNA_H-paniculata_contig26646.7281.1 vs. uniprot
Match: A0A6H5JN55_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN55_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 1.900e-29
Identity = 64/169 (37.87%), Postives = 102/169 (60.36%), Query Frame = 0
Query:    4 PTQQHLVAVKRSFRYLQGHPDVPITYSRCEPKLLRYSDASYCT-----RSTTGTMFFFANGLVHFSSRLQKITATSTTETELIALATCAKQGIYLLGICRELGLQ-LTSCEVRSDNRGALHLAANSNYSSRSKHITIRFAALKDRIRRHQLIIDHVPSTNQLADILTKY 166
            P Q H+ A K   RYL+G PD+PI Y + + +L  ++D+S+       RS TG +F    GL+ + ++ Q + A +T E EL AL+  A++ +Y+     E+G +   S  + SD+ GAL +A+N+ +SSR+KHI +RF  L +  +RH++ + H PS   LADI TK+
Sbjct:  625 PAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNRRSPTGYLFSLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLGELTKRHRITLHHQPSATMLADIATKH 793          
BLAST of mRNA_H-paniculata_contig26646.7281.1 vs. uniprot
Match: UPI0019D5A978 (secreted RxLR effector protein 161-like n=2 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D5A978)

HSP 1 Score: 117 bits (292), Expect = 5.350e-29
Identity = 68/187 (36.36%), Postives = 107/187 (57.22%), Query Frame = 0
Query:    1 MSAPTQQHLVAVKRSFRYLQGHPDVPITYSRCEPKL--LRYSDASYC-----TRSTTGTMFFFANGLVHFSSRLQKITATSTTETELIALATCAKQGIYLLGICREL-GLQLTSCEVRSDNRGALHLAANSNYSSRSKHITIRFAALKDRIRRHQLIIDHVPSTNQLADILTKYCERVVFAQLRSKI 179
            M  PT +HL A+KR  RY+ G  D  + Y R    +  + Y D+        ++ST+GTMFF  + LV++    QK+ A S+ E E IA A+ A QG++L  +  EL G ++   E++ D++ AL L  N  +  RSKHI I++  ++D +    +  DH+ +T+QLADI+TK   +  F ++R KI
Sbjct:   59 MERPTVEHLQAIKRVLRYVAGTLDCGLHYKRASDAMRYIGYCDSDLAGDVDTSKSTSGTMFFLGDCLVYWQLTKQKVVALSSYEAEYIAAASAATQGLWLSRLLEELLGSKVDVVELKMDSKSALALTKNPVFHGRSKHIRIKYHFIRDCLEEGSIKADHISTTDQLADIVTKSLGKTKFQEMRKKI 245          
BLAST of mRNA_H-paniculata_contig26646.7281.1 vs. uniprot
Match: A0A6H5JUN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN9_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 9.390e-29
Identity = 66/182 (36.26%), Postives = 104/182 (57.14%), Query Frame = 0
Query:    4 PTQQHLVAVKRSFRYLQGHPDVPITYSRCEPKLLRYSDASYCT-----RSTTGTMFFFANGLVHFSSRLQKITATSTTETELIALATCAKQGIYLLGICRELGLQ-LTSCEVRSDNRGALHLAANSNYSSRSKHITIRFAALKDRIRRHQLIIDHVPSTNQLADILTKYCERVVFAQLRSKI 179
            P Q H+ A K   RYL+G PD+PI Y + + +   ++D+S        RSTTG +FF   GL+ +  + Q + A +T   EL AL+  A++ +Y+     +LG +   S  + SD+ GAL +A+N  +SSR+KHI +RF  L++  + H++ + H PS   LADI TK+  +  FA +   I
Sbjct:  851 PAQVHMAAAKHLLRYLRGTPDLPIVYKKAQFRPSCFADSSLGANPDNGRSTTGRLFFLGGGLISYGVKAQTLAAQNTVGVELQALSFSAREAVYISNFMTKLGFKNFRSAPLNSDSTGALTVASNVMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHLPKQRFATIMQLI 1032          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26646.7281.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J897_9PHAE8.180e-3841.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KC04_9PHAE6.580e-3437.36Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRF1_9PHAE1.260e-3341.08Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JF46_9PHAE9.150e-3237.36Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K4S9_9PHAE1.390e-3138.07CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JV56_9PHAE1.890e-3142.20Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K8X2_9PHAE4.160e-3036.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN55_9PHAE1.900e-2937.87Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI0019D5A9785.350e-2936.36secreted RxLR effector protein 161-like n=2 Tax=Pa... [more]
A0A6H5JUN9_9PHAE9.390e-2936.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 1..155
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig26646contigH-paniculata_contig26646:1560..2114 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig26646.7281.1mRNA_H-paniculata_contig26646.7281.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig26646 1560..2141 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig26646.7281.1 ID=prot_H-paniculata_contig26646.7281.1|Name=mRNA_H-paniculata_contig26646.7281.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=185bp
MSAPTQQHLVAVKRSFRYLQGHPDVPITYSRCEPKLLRYSDASYCTRSTT
GTMFFFANGLVHFSSRLQKITATSTTETELIALATCAKQGIYLLGICREL
GLQLTSCEVRSDNRGALHLAANSNYSSRSKHITIRFAALKDRIRRHQLII
DHVPSTNQLADILTKYCERVVFAQLRSKILTFGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like