prot_H-paniculata_contig2653.7243.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2653.7243.1
Unique Nameprot_H-paniculata_contig2653.7243.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length268
Homology
[Close]
BLAST of mRNA_H-paniculata_contig2653.7243.1 vs. uniprot
Match: A0A6H5JFE0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFE0_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 2.600e-10
Identity = 42/82 (51.22%), Postives = 54/82 (65.85%), Query Frame = 0 
Query:   10 DIKPPPTEPQVRGPLYQYTSRAMTAGHGPSGSIAPVRLPVLG--AWAAQ--------PASQLLPGISNIRHLSAAVAVLSDS 81
            ++KPPPTEP V GPL+QY+ R+   GHGP+ ++A VRLP L   AW++         P   LLPGISN R LSAA  VL+D+
Sbjct:  602 EMKPPPTEPSVHGPLHQYSGRS---GHGPASNLAHVRLPGLPGLAWSSPSPLSPPVLPHPPLLPGISNFRRLSAAANVLADN 680
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2653.7243.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JFE0_9PHAE2.600e-1051.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2653contigH-paniculata_contig2653:16188..16991 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2653.7243.1mRNA_H-paniculata_contig2653.7243.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2653 16174..17450 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2653.7243.1 ID=prot_H-paniculata_contig2653.7243.1|Name=mRNA_H-paniculata_contig2653.7243.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=268bp
MGRGVVSEGDIKPPPTEPQVRGPLYQYTSRAMTAGHGPSGSIAPVRLPVL
GAWAAQPASQLLPGISNIRHLSAAVAVLSDSPGGGGGGSSRSPWPGQPYD
SAPPGGVASASSSHQHRGGGGGGGPDQAAAQQGQQARAQQQHAGHGGAGR
QDTTGAASADQQMLAPGWAPAQAGHGFPSWGGLPMDNLGAGSGGRDGGGG
GGGGGHGPRSPHYWLPHGAQPTRPQQHHHQQMMPIPEEHAPPGRLPTSSS
MRLPGGGGGGGGHSQLP*
back to top