prot_H-paniculata_contig26452.7219.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig26452.7219.1
Unique Nameprot_H-paniculata_contig26452.7219.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length83
Homology
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BLAST of mRNA_H-paniculata_contig26452.7219.1 vs. uniprot
Match: D8LCP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP8_ECTSI)

HSP 1 Score: 53.9 bits (128), Expect = 1.690e-6
Identity = 28/68 (41.18%), Postives = 38/68 (55.88%), Query Frame = 0 
Query:    1 VWIGVVLDRGQTHDAVVHRTVSMVWGDICNAETFLLKVTMAYDDGTTLVTKTIPCASASDAETCWVQV 68
            +W GVV+D          R VSM WG++C+ ETF LKV+    +G T   K++PC   S  E C V+V
Sbjct:  218 IWNGVVIDPEPDAGEAFPRGVSMTWGEVCDVETFSLKVSKHTVEGNTSAVKSVPCG-LSGVEVCLVEV 284
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26452.7219.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LCP8_ECTSI1.690e-641.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig26452contigH-paniculata_contig26452:779..1779 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig26452.7219.1mRNA_H-paniculata_contig26452.7219.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig26452 777..1779 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig26452.7219.1 ID=prot_H-paniculata_contig26452.7219.1|Name=mRNA_H-paniculata_contig26452.7219.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=83bp
VWIGVVLDRGQTHDAVVHRTVSMVWGDICNAETFLLKVTMAYDDGTTLVT
KTIPCASASDAETCWVQVSDTSRESGELLTSDV
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