prot_H-paniculata_contig2637.7200.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2637.7200.1
Unique Nameprot_H-paniculata_contig2637.7200.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length187
Homology
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BLAST of mRNA_H-paniculata_contig2637.7200.1 vs. uniprot
Match: A0A6H5JK76_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK76_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 2.080e-18
Identity = 55/107 (51.40%), Postives = 68/107 (63.55%), Query Frame = 0 
Query:   52 AEEDTDVLDDKEMASTAAAGIRGDXXXXXXFGG--GDPTELLLELDNSVQFRVPAEKGRLLLVLRNRLHAAFAQHMQTNARPASGPVADTISAVSSLLHEPSVKVAA 156
            A ED + + D +  +T  AG           GG  G   ELL ELD+ VQFR+PA++GR LLVLRNRLH  FA +MQ N RPA+GP ADTI+  ++LLHEPSV   A
Sbjct:  925 AREDEEKMHDTQEVATMGAG--------GPVGGVRGRGMELLFELDDWVQFRLPADQGRNLLVLRNRLHTEFAVYMQANGRPAAGPAADTIAVANALLHEPSVAAGA 1023
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BLAST of mRNA_H-paniculata_contig2637.7200.1 vs. uniprot
Match: A0A835Z8N8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8N8_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.470e-6
Identity = 39/98 (39.80%), Postives = 50/98 (51.02%), Query Frame = 0 
Query:   66 STAAAGIRGDXXXXXXFGGGD----PTELLLELDNSVQFRVPAEKGRLLLVLRNRLHAAFAQHMQTNARPASGPVADTISAVSSLLHEPSVKVAAAAS 159
            +  AA   GD       GG D    P EL+L LD+ V    P + G  LLVLR RLH AFA  ++  AR       DT+  V +LLH+P +  +AA S
Sbjct: 1283 NVTAAARGGDEGEGDGEGGDDAQEEPPELVLTLDDCVSLAAPRQLGERLLVLRQRLHRAFATRVRAPARSLGAAYDDTVRVVVALLHDPVIARSAAKS 1380
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2637.7200.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JK76_9PHAE2.080e-1851.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z8N8_9STRA1.470e-639.80Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2637contigH-paniculata_contig2637:16670..18663 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2637.7200.1mRNA_H-paniculata_contig2637.7200.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2637 16670..18664 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2637.7200.1 ID=prot_H-paniculata_contig2637.7200.1|Name=mRNA_H-paniculata_contig2637.7200.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=187bp
AFFCACRRACLSVCEYVFVLGYSDRAGHRLFLLPPQLCIILQLVLDTGEG
DAEEDTDVLDDKEMASTAAAGIRGDGDGDGGFGGGDPTELLLELDNSVQF
RVPAEKGRLLLVLRNRLHAAFAQHMQTNARPASGPVADTISAVSSLLHEP
SVKVAAAASSGHHGNFHGQQRNWAAPGGGGRSGGWRG
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