prot_H-paniculata_contig26124.7139.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig26124.7139.1
Unique Nameprot_H-paniculata_contig26124.7139.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length85
Homology
BLAST of mRNA_H-paniculata_contig26124.7139.1 vs. uniprot
Match: D7G7D3_ECTSI (Methyltransf_FA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7D3_ECTSI)

HSP 1 Score: 132 bits (332), Expect = 4.340e-34
Identity = 61/78 (78.21%), Postives = 67/78 (85.90%), Query Frame = 0
Query:    7 KEQASLYPHKIHIFSLDKVVCKQIRDNDVKAYFEGFSPKYVEWLSDWSFNVVFQDEEEAKKAAAAKSFALPEALPPDI 84
            +  A+ +PHKIHIFSLDK VCKQIRDNDVKAYF+GF PKYVEWLSDWSFNVVF D E AKKAAAAKSF LP+ LP +I
Sbjct:  442 EPMATTFPHKIHIFSLDKTVCKQIRDNDVKAYFDGFGPKYVEWLSDWSFNVVFDDAEGAKKAAAAKSFGLPDTLPKEI 519          
BLAST of mRNA_H-paniculata_contig26124.7139.1 vs. uniprot
Match: A0A6H5K6R7_9PHAE (Methyltransf_FA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6R7_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 6.130e-34
Identity = 60/78 (76.92%), Postives = 67/78 (85.90%), Query Frame = 0
Query:    7 KEQASLYPHKIHIFSLDKVVCKQIRDNDVKAYFEGFSPKYVEWLSDWSFNVVFQDEEEAKKAAAAKSFALPEALPPDI 84
            +  A+ +PHKIH+FSLDK VCKQIRDNDVKAYF+GF PKYVEWLSDWSFNVVF D E AKKAAAAKSF LP+ LP +I
Sbjct:  452 EPMATTFPHKIHVFSLDKTVCKQIRDNDVKAYFDGFGPKYVEWLSDWSFNVVFDDAEGAKKAAAAKSFGLPDTLPKEI 529          
BLAST of mRNA_H-paniculata_contig26124.7139.1 vs. uniprot
Match: A0A835Z5S9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5S9_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 6.740e-14
Identity = 32/61 (52.46%), Postives = 41/61 (67.21%), Query Frame = 0
Query:    8 EQASLYPHKIHIFSLDKVVCKQIRDNDVKAYFEGFSPKYVEWLSDWSFNVVFQDEEEAKKA 68
            E     P K+H+FSLDK  CK++R  DV+AYF     +YVEW++DWSFNVVF  E +A  A
Sbjct:  522 EPVRAIPDKLHVFSLDKFTCKKMRQRDVQAYFGTHGARYVEWINDWSFNVVFPSERDAGNA 582          
BLAST of mRNA_H-paniculata_contig26124.7139.1 vs. uniprot
Match: A0A1Z5JT33_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JT33_FISSO)

HSP 1 Score: 69.7 bits (169), Expect = 5.160e-12
Identity = 37/76 (48.68%), Postives = 46/76 (60.53%), Query Frame = 0
Query:    8 EQASLYPHKIHIFSLDKVVCKQIRDNDVKAYFEGFSPKYVEWLSDWSFNVVFQDEEEAKKAAAAKSFALPEALPPD 83
            E   L P KIHIFS+D    KQIR +D+ A+F  + P YVEWL D S NV+FQD   A +A    S  +P + PPD
Sbjct:  409 EPPRLTPEKIHIFSIDWAAFKQIRTDDIMAFFSIYGPSYVEWLGDLSCNVLFQDRFSAARALENLSQEIP-SPPPD 483          
BLAST of mRNA_H-paniculata_contig26124.7139.1 vs. uniprot
Match: A0A7S2A5W5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A5W5_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 8.480e-11
Identity = 33/68 (48.53%), Postives = 42/68 (61.76%), Query Frame = 0
Query:   10 ASLYPHKIHIFSLDKVVCKQIRDNDVKAYFEGFSPKYVEWLSDWSFNVVFQDEEEAKKAAAAKSFALP 77
            A L   KIHIFSLD    KQIR  D+ A+F  + P YVEWL+D+S N++F  E  A +A A  +  LP
Sbjct:  412 AVLVKEKIHIFSLDWAAFKQIRSPDIMAHFADYGPSYVEWLNDYSCNILFDCEYSAARALANCTMELP 479          
BLAST of mRNA_H-paniculata_contig26124.7139.1 vs. uniprot
Match: A0A7S1BB62_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BB62_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.430e-9
Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 0
Query:    8 EQASLYPHKIHIFSLDKVVCKQIRDNDVKAYFEGFSPKYVEWLSDWSFNVVFQDEEEAKKA 68
            E   L P KIH+F LD    KQ+R+ND+  YF  + P  +EWL ++S N++FQD   A +A
Sbjct:  466 ETDVLIPEKIHLFCLDCAAFKQMRNNDLMEYFSDYGPYCIEWLGEFSCNIIFQDRHTASRA 526          
BLAST of mRNA_H-paniculata_contig26124.7139.1 vs. uniprot
Match: A0A7S0GEV2_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GEV2_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 1.700e-6
Identity = 24/49 (48.98%), Postives = 32/49 (65.31%), Query Frame = 0
Query:   29 QIRDNDVKAYFEGFSPKYVEWLSDWSFNVVFQDEEEAKKAAAAKSFALP 77
            QIR +D+  Y   F P YVEWLSD+S N++F+D   A +A A  S A+P
Sbjct:    3 QIRTDDIMEYLSDFEPSYVEWLSDFSCNILFEDSLSAARALAGLSQAIP 51          
BLAST of mRNA_H-paniculata_contig26124.7139.1 vs. uniprot
Match: K0S7G4_THAOC (Methyltransf_FA domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S7G4_THAOC)

HSP 1 Score: 53.9 bits (128), Expect = 1.850e-6
Identity = 24/46 (52.17%), Postives = 30/46 (65.22%), Query Frame = 0
Query:    5 FLKEQASLYPHKIHIFSLDKVVCKQIRDNDVKAYFEGFSPKYVEWL 50
            F+  + S+ P KIH+FS D    KQIR +DV AYF  + P YVEWL
Sbjct:  514 FIPRKVSIVPTKIHLFSNDWAPFKQIRTDDVMAYFRDYGPSYVEWL 559          
BLAST of mRNA_H-paniculata_contig26124.7139.1 vs. uniprot
Match: A0A484EBB6_BRELC (Methyltransf_FA domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EBB6_BRELC)

HSP 1 Score: 53.9 bits (128), Expect = 1.870e-6
Identity = 25/55 (45.45%), Postives = 36/55 (65.45%), Query Frame = 0
Query:   17 IHIFSLDKVVCKQIRDNDVKAYFEGFSPKYVEWLSDWSFNVVFQDEEEAKKAAAA 71
            +H++SLD    +Q+R  DVK YF GF+P Y+EW +D S  +VF D   A++A  A
Sbjct:  388 LHMYSLDDDF-QQVRTTDVKRYFTGFAPAYIEWFNDSSCTIVFNDTFTAERALVA 441          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26124.7139.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7G7D3_ECTSI4.340e-3478.21Methyltransf_FA domain-containing protein n=1 Tax=... [more]
A0A6H5K6R7_9PHAE6.130e-3476.92Methyltransf_FA domain-containing protein n=1 Tax=... [more]
A0A835Z5S9_9STRA6.740e-1452.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1Z5JT33_FISSO5.160e-1248.68Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S2A5W5_9STRA8.480e-1148.53Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S1BB62_9STRA1.430e-944.26Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S0GEV2_9STRA1.700e-648.98Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
K0S7G4_THAOC1.850e-652.17Methyltransf_FA domain-containing protein n=1 Tax=... [more]
A0A484EBB6_BRELC1.870e-645.45Methyltransf_FA domain-containing protein n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 9..77
e-value: 2.2E-5
score: 26.5
IPR019416Nuclear cap-binding protein subunit 3PFAMPF10309NCBP3coord: 13..68
e-value: 1.2E-12
score: 47.5
IPR019416Nuclear cap-binding protein subunit 3PANTHERPTHR16291FAMILY NOT NAMEDcoord: 11..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig26124contigH-paniculata_contig26124:284..538 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig26124.7139.1mRNA_H-paniculata_contig26124.7139.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig26124 284..538 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig26124.7139.1 ID=prot_H-paniculata_contig26124.7139.1|Name=mRNA_H-paniculata_contig26124.7139.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=85bp
MCLFFLKEQASLYPHKIHIFSLDKVVCKQIRDNDVKAYFEGFSPKYVEWL
SDWSFNVVFQDEEEAKKAAAAKSFALPEALPPDIR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012677Nucleotide-bd_a/b_plait_sf
IPR019416NCBP3