mRNA_H-paniculata_contig26124.7139.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig26124.7139.1 vs. uniprot
Match: D7G7D3_ECTSI (Methyltransf_FA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7D3_ECTSI) HSP 1 Score: 132 bits (332), Expect = 4.340e-34 Identity = 61/78 (78.21%), Postives = 67/78 (85.90%), Query Frame = 1
Query: 19 KEQASLYPHKIHIFSLDKVVCKQIRDNDVKAYFEGFSPKYVEWLSDWSFNVVFQDEEEAKKAAAAKSFALPEALPPDI 252
+ A+ +PHKIHIFSLDK VCKQIRDNDVKAYF+GF PKYVEWLSDWSFNVVF D E AKKAAAAKSF LP+ LP +I
Sbjct: 442 EPMATTFPHKIHIFSLDKTVCKQIRDNDVKAYFDGFGPKYVEWLSDWSFNVVFDDAEGAKKAAAAKSFGLPDTLPKEI 519
BLAST of mRNA_H-paniculata_contig26124.7139.1 vs. uniprot
Match: A0A6H5K6R7_9PHAE (Methyltransf_FA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6R7_9PHAE) HSP 1 Score: 132 bits (331), Expect = 6.130e-34 Identity = 60/78 (76.92%), Postives = 67/78 (85.90%), Query Frame = 1
Query: 19 KEQASLYPHKIHIFSLDKVVCKQIRDNDVKAYFEGFSPKYVEWLSDWSFNVVFQDEEEAKKAAAAKSFALPEALPPDI 252
+ A+ +PHKIH+FSLDK VCKQIRDNDVKAYF+GF PKYVEWLSDWSFNVVF D E AKKAAAAKSF LP+ LP +I
Sbjct: 452 EPMATTFPHKIHVFSLDKTVCKQIRDNDVKAYFDGFGPKYVEWLSDWSFNVVFDDAEGAKKAAAAKSFGLPDTLPKEI 529
BLAST of mRNA_H-paniculata_contig26124.7139.1 vs. uniprot
Match: A0A835Z5S9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5S9_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 6.740e-14 Identity = 32/61 (52.46%), Postives = 41/61 (67.21%), Query Frame = 1
Query: 22 EQASLYPHKIHIFSLDKVVCKQIRDNDVKAYFEGFSPKYVEWLSDWSFNVVFQDEEEAKKA 204
E P K+H+FSLDK CK++R DV+AYF +YVEW++DWSFNVVF E +A A
Sbjct: 522 EPVRAIPDKLHVFSLDKFTCKKMRQRDVQAYFGTHGARYVEWINDWSFNVVFPSERDAGNA 582
BLAST of mRNA_H-paniculata_contig26124.7139.1 vs. uniprot
Match: A0A1Z5JT33_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JT33_FISSO) HSP 1 Score: 69.7 bits (169), Expect = 5.160e-12 Identity = 37/76 (48.68%), Postives = 46/76 (60.53%), Query Frame = 1
Query: 22 EQASLYPHKIHIFSLDKVVCKQIRDNDVKAYFEGFSPKYVEWLSDWSFNVVFQDEEEAKKAAAAKSFALPEALPPD 249
E L P KIHIFS+D KQIR +D+ A+F + P YVEWL D S NV+FQD A +A S +P + PPD
Sbjct: 409 EPPRLTPEKIHIFSIDWAAFKQIRTDDIMAFFSIYGPSYVEWLGDLSCNVLFQDRFSAARALENLSQEIP-SPPPD 483
BLAST of mRNA_H-paniculata_contig26124.7139.1 vs. uniprot
Match: A0A7S2A5W5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A5W5_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 8.480e-11 Identity = 33/68 (48.53%), Postives = 42/68 (61.76%), Query Frame = 1
Query: 28 ASLYPHKIHIFSLDKVVCKQIRDNDVKAYFEGFSPKYVEWLSDWSFNVVFQDEEEAKKAAAAKSFALP 231
A L KIHIFSLD KQIR D+ A+F + P YVEWL+D+S N++F E A +A A + LP
Sbjct: 412 AVLVKEKIHIFSLDWAAFKQIRSPDIMAHFADYGPSYVEWLNDYSCNILFDCEYSAARALANCTMELP 479
BLAST of mRNA_H-paniculata_contig26124.7139.1 vs. uniprot
Match: A0A7S1BB62_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BB62_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 1.430e-9 Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 1
Query: 22 EQASLYPHKIHIFSLDKVVCKQIRDNDVKAYFEGFSPKYVEWLSDWSFNVVFQDEEEAKKA 204
E L P KIH+F LD KQ+R+ND+ YF + P +EWL ++S N++FQD A +A
Sbjct: 466 ETDVLIPEKIHLFCLDCAAFKQMRNNDLMEYFSDYGPYCIEWLGEFSCNIIFQDRHTASRA 526
BLAST of mRNA_H-paniculata_contig26124.7139.1 vs. uniprot
Match: A0A7S0GEV2_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GEV2_9STRA) HSP 1 Score: 53.9 bits (128), Expect = 1.700e-6 Identity = 24/49 (48.98%), Postives = 32/49 (65.31%), Query Frame = 1
Query: 85 QIRDNDVKAYFEGFSPKYVEWLSDWSFNVVFQDEEEAKKAAAAKSFALP 231
QIR +D+ Y F P YVEWLSD+S N++F+D A +A A S A+P
Sbjct: 3 QIRTDDIMEYLSDFEPSYVEWLSDFSCNILFEDSLSAARALAGLSQAIP 51
BLAST of mRNA_H-paniculata_contig26124.7139.1 vs. uniprot
Match: K0S7G4_THAOC (Methyltransf_FA domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S7G4_THAOC) HSP 1 Score: 53.9 bits (128), Expect = 1.850e-6 Identity = 24/46 (52.17%), Postives = 30/46 (65.22%), Query Frame = 1
Query: 13 FLKEQASLYPHKIHIFSLDKVVCKQIRDNDVKAYFEGFSPKYVEWL 150
F+ + S+ P KIH+FS D KQIR +DV AYF + P YVEWL
Sbjct: 514 FIPRKVSIVPTKIHLFSNDWAPFKQIRTDDVMAYFRDYGPSYVEWL 559
BLAST of mRNA_H-paniculata_contig26124.7139.1 vs. uniprot
Match: A0A484EBB6_BRELC (Methyltransf_FA domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EBB6_BRELC) HSP 1 Score: 53.9 bits (128), Expect = 1.870e-6 Identity = 25/55 (45.45%), Postives = 36/55 (65.45%), Query Frame = 1
Query: 49 IHIFSLDKVVCKQIRDNDVKAYFEGFSPKYVEWLSDWSFNVVFQDEEEAKKAAAA 213
+H++SLD +Q+R DVK YF GF+P Y+EW +D S +VF D A++A A
Sbjct: 388 LHMYSLDDDF-QQVRTTDVKRYFTGFAPAYIEWFNDSSCTIVFNDTFTAERALVA 441 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26124.7139.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig26124.7139.1 >prot_H-paniculata_contig26124.7139.1 ID=prot_H-paniculata_contig26124.7139.1|Name=mRNA_H-paniculata_contig26124.7139.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=85bp MCLFFLKEQASLYPHKIHIFSLDKVVCKQIRDNDVKAYFEGFSPKYVEWLback to top mRNA from alignment at H-paniculata_contig26124:284..538+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig26124.7139.1 ID=mRNA_H-paniculata_contig26124.7139.1|Name=mRNA_H-paniculata_contig26124.7139.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=255bp|location=Sequence derived from alignment at H-paniculata_contig26124:284..538+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig26124:284..538+ >mRNA_H-paniculata_contig26124.7139.1 ID=mRNA_H-paniculata_contig26124.7139.1|Name=mRNA_H-paniculata_contig26124.7139.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=510bp|location=Sequence derived from alignment at H-paniculata_contig26124:284..538+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |