prot_H-paniculata_contig255.6945.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig255.6945.1
Unique Nameprot_H-paniculata_contig255.6945.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length540
Homology
BLAST of mRNA_H-paniculata_contig255.6945.1 vs. uniprot
Match: D8LLD7_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLD7_ECTSI)

HSP 1 Score: 278 bits (711), Expect = 2.540e-83
Identity = 208/563 (36.94%), Postives = 288/563 (51.15%), Query Frame = 0
Query:    1 MKVSKDIQLMWLQRWQVMDNDGSNLLDYKEFVGGCGLEDNLWSWRVFNLLDKNCTGTCVAFRMLSRRGASCTPENTVLDENDLRRFVEQRRLLRHYSKAVGMHSWDASRLQTGSRSSPKRAAALPPNVANQRKRKVDETIATTRAALDKMKRFASEPSLGRQYNSPVRHRATIDT---------VNRDQEVYLHFVATVMILYALLVAVIIPEVPRCLPNTALLRGAGTRVSNGTKIGSSRALAALRRSVRLITMSRHMSNL----------------PTTSGRKW-NINAADDDGLGDSETRRHDESSASSEDEDIVEDKNVLATGNEKPAGAANSAMIASGALTRGGKSGPKRGTEDRRWAMTVQFYEHVATAAARLEFNRTDDTGYDFSADFPKLWGMNHLHHENSIEDIRREHRKRKASTAQNVARVDTRFISCWQEA--TSGRSKLAIAFSRWRLHTCCDGLDESSLTHSLTRRSGTDTSTVCTVNGGSTIANPQSQTVAEMWETSGGAS-GDQQDIYCLVIMKEQNDRLLPSELCDKYARDMADRINRRQRTKNIPI 534
            M VS D++L WLQRWQ MD DGSNLLDY EF+  C L DN+WSWR+FNLLDKN     VAFRM SRRG++  P+ +VLDE D+R FVE+R L  H+    G+     S     +RS      + P  +A++R     ET     +A D  +   +   L  +  +  R    +++           RD E +    ATV +  A+     + E  R  P+    R  G RV    K+G  +AL+ALRRS   IT +R+ S                  PT++  +  + N AD    GD      DE S  S+      +  V AT  EKP             LT        +  ++R WA+T +FY ++ TA+ RLE  RT + GYDFSADFPKLW   ++       +I+   RKR++S ++  A V  RFI+ WQ A   SGRSKLA AF+RWRL+TC   +D+ S + S   R GT  S        ST A     ++ EMWE++  A  G+   ++ +++ K Q DR LP ELC+ Y R+M +RI+RRQ   N+PI
Sbjct:    1 MNVSPDMRLSWLQRWQSMDEDGSNLLDYPEFLQACELRDNMWSWRMFNLLDKNFVE--VAFRMCSRRGSTWDPDKSVLDEKDIRLFVEERIL--HHLYNEGLKDGPTSARARWARSMSPAELSSPVKIASKR-----ETKHLAESARDISQSGGAIRELSARKMADTRDWLKVESEMLTEAAKGAARDLEKFGRLKATVTVAVAVNRMRALAEAARQRPDGETARNTGKRVGEAAKVGGEKALSALRRSFVAITAARYFSEAGPDPARGELRRHDQQRPTSANLEGGDPNVADS---GDGMLLGEDEDSEDSQRAREDFESEVPATAVEKPWDI----------LTDAKAKAEVKMFQERHWAVTEKFYANLVTASERLEEKRTKEKGYDFSADFPKLWCAANMRGSQGEREIQYR-RKRRSSASKKAANVYLRFITLWQVAGDDSGRSKLAKAFNRWRLNTCDAAVDDLSGSLSTLSRGGTAAS-----EESSTYAPRHIPSLKEMWESAAAAGEGEGTHVHAIIMRKAQADRPLPRELCEAYEREMVERIDRRQAENNVPI 535          
BLAST of mRNA_H-paniculata_contig255.6945.1 vs. uniprot
Match: A0A6H5JXQ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXQ3_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 9.760e-18
Identity = 45/68 (66.18%), Postives = 51/68 (75.00%), Query Frame = 0
Query:    1 MKVSKDIQLMWLQRWQVMDNDGSNLLDYKEFVGGCGLEDNLWSWRVFNLLDKNCTGTCVAFRMLSRRG 68
            MKVS D++L WLQRWQ MD DGSNLLDY EF+  CGL DN+WSWR+FNLLDKN  G   A+  L  RG
Sbjct:    1 MKVSSDMRLSWLQRWQSMDEDGSNLLDYTEFLQACGLRDNIWSWRMFNLLDKNFVGVMEAY--LGARG 66          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig255.6945.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLD7_ECTSI2.540e-8336.94EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JXQ3_9PHAE9.760e-1866.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 19..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 203..539
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 182..202
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..181
NoneNo IPR availableTMHMMTMhelixcoord: 183..205

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig255contigH-paniculata_contig255:5838..10911 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig255.6945.1mRNA_H-paniculata_contig255.6945.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig255 5838..10911 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig255.6945.1 ID=prot_H-paniculata_contig255.6945.1|Name=mRNA_H-paniculata_contig255.6945.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=540bp
MKVSKDIQLMWLQRWQVMDNDGSNLLDYKEFVGGCGLEDNLWSWRVFNLL
DKNCTGTCVAFRMLSRRGASCTPENTVLDENDLRRFVEQRRLLRHYSKAV
GMHSWDASRLQTGSRSSPKRAAALPPNVANQRKRKVDETIATTRAALDKM
KRFASEPSLGRQYNSPVRHRATIDTVNRDQEVYLHFVATVMILYALLVAV
IIPEVPRCLPNTALLRGAGTRVSNGTKIGSSRALAALRRSVRLITMSRHM
SNLPTTSGRKWNINAADDDGLGDSETRRHDESSASSEDEDIVEDKNVLAT
GNEKPAGAANSAMIASGALTRGGKSGPKRGTEDRRWAMTVQFYEHVATAA
ARLEFNRTDDTGYDFSADFPKLWGMNHLHHENSIEDIRREHRKRKASTAQ
NVARVDTRFISCWQEATSGRSKLAIAFSRWRLHTCCDGLDESSLTHSLTR
RSGTDTSTVCTVNGGSTIANPQSQTVAEMWETSGGASGDQQDIYCLVIMK
EQNDRLLPSELCDKYARDMADRINRRQRTKNIPIPMQFF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS