prot_H-paniculata_contig25364.6905.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig25364.6905.1
Unique Nameprot_H-paniculata_contig25364.6905.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length45
Homology
BLAST of mRNA_H-paniculata_contig25364.6905.1 vs. uniprot
Match: D8LNT5_ECTSI (Tryptophan--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNT5_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 6.550e-15
Identity = 39/44 (88.64%), Postives = 41/44 (93.18%), Query Frame = 0
Query:    1 MLTGEVKKILIEILTEMTKTHQDARAAVTAEDVRSFMAVRPING 44
            MLTGEVKKILIEILT+MTK HQDARAAVT E VRSFMAVRPI+G
Sbjct:  552 MLTGEVKKILIEILTKMTKDHQDARAAVTDEMVRSFMAVRPIDG 595          
BLAST of mRNA_H-paniculata_contig25364.6905.1 vs. uniprot
Match: A0A822XKC0_NELNU (Uncharacterized protein n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A822XKC0_NELNU)

HSP 1 Score: 60.1 bits (144), Expect = 1.860e-10
Identity = 30/45 (66.67%), Postives = 37/45 (82.22%), Query Frame = 0
Query:    1 MLTGEVKKILIEILTEMTKTHQDARAAVTAEDVRSFMAVRPINGL 45
            MLTGEVKK LIE+LTE+ + H+ ARAAVT E V +FMAVRP+ G+
Sbjct:   67 MLTGEVKKRLIEVLTELVERHRRARAAVTDEMVDAFMAVRPLPGM 111          
BLAST of mRNA_H-paniculata_contig25364.6905.1 vs. uniprot
Match: A0A2P6PCG5_ROSCH (Putative tryptophan--tRNA ligase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6PCG5_ROSCH)

HSP 1 Score: 57.8 bits (138), Expect = 3.660e-10
Identity = 28/42 (66.67%), Postives = 35/42 (83.33%), Query Frame = 0
Query:    1 MLTGEVKKILIEILTEMTKTHQDARAAVTAEDVRSFMAVRPI 42
            MLTG+VKK LIE+LTE+ + H+ ARAAVT E V +FMAVRP+
Sbjct:    7 MLTGQVKKRLIEVLTEIVERHRQARAAVTGEMVDAFMAVRPL 48          
BLAST of mRNA_H-paniculata_contig25364.6905.1 vs. uniprot
Match: A0A2G5DTR4_AQUCA (Tryptophan--tRNA ligase n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5DTR4_AQUCA)

HSP 1 Score: 60.8 bits (146), Expect = 1.130e-9
Identity = 29/45 (64.44%), Postives = 37/45 (82.22%), Query Frame = 0
Query:    1 MLTGEVKKILIEILTEMTKTHQDARAAVTAEDVRSFMAVRPINGL 45
            MLTGEVK +LIE+LTEM   H++AR+AVT E V +FMAVRP+ G+
Sbjct:  272 MLTGEVKSLLIEVLTEMVMRHREARSAVTDEMVDAFMAVRPLPGM 316          
BLAST of mRNA_H-paniculata_contig25364.6905.1 vs. uniprot
Match: A0A314UKE0_PRUYE (Tryptophan--tRNA ligase cytoplasmic-like n=1 Tax=Prunus yedoensis var. nudiflora TaxID=2094558 RepID=A0A314UKE0_PRUYE)

HSP 1 Score: 57.0 bits (136), Expect = 3.640e-9
Identity = 27/42 (64.29%), Postives = 36/42 (85.71%), Query Frame = 0
Query:    1 MLTGEVKKILIEILTEMTKTHQDARAAVTAEDVRSFMAVRPI 42
            MLTGEVK++LI++LTE+ + H+ ARAAVT E V +FMAVRP+
Sbjct:   76 MLTGEVKQLLIQVLTELVERHRRARAAVTDEMVDAFMAVRPL 117          
BLAST of mRNA_H-paniculata_contig25364.6905.1 vs. uniprot
Match: A0A078HTL1_BRANA ((rape) hypothetical protein n=4 Tax=Brassica TaxID=3705 RepID=A0A078HTL1_BRANA)

HSP 1 Score: 56.6 bits (135), Expect = 4.070e-9
Identity = 29/42 (69.05%), Postives = 34/42 (80.95%), Query Frame = 0
Query:    1 MLTGEVKKILIEILTEMTKTHQDARAAVTAEDVRSFMAVRPI 42
            MLTGEVKK L E+LTEM + H+ ARAAVT E V +FMAVRP+
Sbjct:   65 MLTGEVKKRLTEVLTEMVERHRMARAAVTDEMVDAFMAVRPL 106          
BLAST of mRNA_H-paniculata_contig25364.6905.1 vs. uniprot
Match: A0A6P5XL47_DURZI (Tryptophan--tRNA ligase n=6 Tax=Malvaceae TaxID=3629 RepID=A0A6P5XL47_DURZI)

HSP 1 Score: 58.9 bits (141), Expect = 6.050e-9
Identity = 29/42 (69.05%), Postives = 35/42 (83.33%), Query Frame = 0
Query:    1 MLTGEVKKILIEILTEMTKTHQDARAAVTAEDVRSFMAVRPI 42
            MLTGEVKK LIE+LTE+ + H+ ARAAVT E V +FMAVRP+
Sbjct:  353 MLTGEVKKRLIEVLTELVERHRTARAAVTDETVDAFMAVRPL 394          
BLAST of mRNA_H-paniculata_contig25364.6905.1 vs. uniprot
Match: UPI001C25D9B7 (tryptophan--tRNA ligase, cytoplasmic-like n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C25D9B7)

HSP 1 Score: 55.5 bits (132), Expect = 6.250e-9
Identity = 27/42 (64.29%), Postives = 34/42 (80.95%), Query Frame = 0
Query:    1 MLTGEVKKILIEILTEMTKTHQDARAAVTAEDVRSFMAVRPI 42
            MLTGE+KK L E+LTE+ + H+ ARAAVT E V +FMAVRP+
Sbjct:   38 MLTGEIKKRLTEVLTELVERHRRARAAVTDEMVDAFMAVRPL 79          
BLAST of mRNA_H-paniculata_contig25364.6905.1 vs. uniprot
Match: UPI000C1D8884 (tryptophan--tRNA ligase, cytoplasmic-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D8884)

HSP 1 Score: 57.4 bits (137), Expect = 6.910e-9
Identity = 30/42 (71.43%), Postives = 34/42 (80.95%), Query Frame = 0
Query:    1 MLTGEVKKILIEILTEMTKTHQDARAAVTAEDVRSFMAVRPI 42
            MLTGEVKK L EILTEM + H+ ARAAVT E V +FMAVRP+
Sbjct:  131 MLTGEVKKRLTEILTEMVERHRRARAAVTDEMVDAFMAVRPL 172          
BLAST of mRNA_H-paniculata_contig25364.6905.1 vs. uniprot
Match: A0A2U1LW90_ARTAN (Tryptophan--tRNA ligase n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1LW90_ARTAN)

HSP 1 Score: 57.4 bits (137), Expect = 8.280e-9
Identity = 28/42 (66.67%), Postives = 34/42 (80.95%), Query Frame = 0
Query:    1 MLTGEVKKILIEILTEMTKTHQDARAAVTAEDVRSFMAVRPI 42
            MLTGE+KK L+E+L+EM + HQ ARA VT E V SFMAVRP+
Sbjct:  144 MLTGEIKKRLVEVLSEMVERHQAARALVTDEMVDSFMAVRPL 185          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25364.6905.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNT5_ECTSI6.550e-1588.64Tryptophan--tRNA ligase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A822XKC0_NELNU1.860e-1066.67Uncharacterized protein n=1 Tax=Nelumbo nucifera T... [more]
A0A2P6PCG5_ROSCH3.660e-1066.67Putative tryptophan--tRNA ligase n=1 Tax=Rosa chin... [more]
A0A2G5DTR4_AQUCA1.130e-964.44Tryptophan--tRNA ligase n=1 Tax=Aquilegia coerulea... [more]
A0A314UKE0_PRUYE3.640e-964.29Tryptophan--tRNA ligase cytoplasmic-like n=1 Tax=P... [more]
A0A078HTL1_BRANA4.070e-969.05(rape) hypothetical protein n=4 Tax=Brassica TaxID... [more]
A0A6P5XL47_DURZI6.050e-969.05Tryptophan--tRNA ligase n=6 Tax=Malvaceae TaxID=36... [more]
UPI001C25D9B76.250e-964.29tryptophan--tRNA ligase, cytoplasmic-like n=1 Tax=... [more]
UPI000C1D88846.910e-971.43tryptophan--tRNA ligase, cytoplasmic-like n=1 Tax=... [more]
A0A2U1LW90_ARTAN8.280e-966.67Tryptophan--tRNA ligase n=1 Tax=Artemisia annua Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.240.10coord: 1..44
e-value: 2.8E-12
score: 48.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig25364contigH-paniculata_contig25364:3186..3320 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig25364.6905.1mRNA_H-paniculata_contig25364.6905.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig25364 3186..3341 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig25364.6905.1 ID=prot_H-paniculata_contig25364.6905.1|Name=mRNA_H-paniculata_contig25364.6905.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=45bp
MLTGEVKKILIEILTEMTKTHQDARAAVTAEDVRSFMAVRPINGL
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