prot_H-paniculata_contig25231.6874.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig25231.6874.1
Unique Nameprot_H-paniculata_contig25231.6874.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length154
Homology
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BLAST of mRNA_H-paniculata_contig25231.6874.1 vs. uniprot
Match: D7FH97_ECTSI (Similar to chromosome fragility associated gene 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH97_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 1.350e-9
Identity = 38/71 (53.52%), Postives = 51/71 (71.83%), Query Frame = 0 
Query:   81 MTDEQLLLAVEMFLTKDQRKRKARLIKAQTEQRNAIDAERKLLSDRAQRDAWAQQA--HAPTQAIPHSKRG 149
            MTD+QLL AV+MFLT +QRKRK  + + Q ++R  IDA  KLLSDRAQRD+WA  A   +P + +  ++RG
Sbjct:  689 MTDDQLLSAVDMFLTTEQRKRKEAIKRDQAKKRKDIDAANKLLSDRAQRDSWAHSAASFSPGEEVAWTERG 759
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BLAST of mRNA_H-paniculata_contig25231.6874.1 vs. uniprot
Match: A0A6H5KGC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGC2_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 4.420e-9
Identity = 35/56 (62.50%), Postives = 42/56 (75.00%), Query Frame = 0 
Query:   81 MTDEQLLLAVEMFLTKDQRKRKARLIKAQTEQRNAIDAERKLLSDRAQRDAWAQQA 136
            MTD+QLL AV+MFLT DQRKRK  + + Q ++R  IDA  KLL DRAQRD+WA  A
Sbjct:  440 MTDDQLLSAVDMFLTTDQRKRKEAIKRDQAKKRKDIDAANKLLRDRAQRDSWAHSA 495
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25231.6874.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FH97_ECTSI1.350e-953.52Similar to chromosome fragility associated gene 1 ... [more]
A0A6H5KGC2_9PHAE4.420e-962.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig25231contigH-paniculata_contig25231:815..2731 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig25231.6874.1mRNA_H-paniculata_contig25231.6874.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig25231 814..2731 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig25231.6874.1 ID=prot_H-paniculata_contig25231.6874.1|Name=mRNA_H-paniculata_contig25231.6874.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=154bp
VTEVHDDDDDDVQEMGVVVQHSRPDTVSHSGSGSGDVPNLQGEAVFPITS
GGVSSRKNTPVRVANAVERGGVTPAASDGDMTDEQLLLAVEMFLTKDQRK
RKARLIKAQTEQRNAIDAERKLLSDRAQRDAWAQQAHAPTQAIPHSKRGS
PSDG
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