prot_H-paniculata_contig24631.6680.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig24631.6680.1
Unique Nameprot_H-paniculata_contig24631.6680.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length202
Homology
BLAST of mRNA_H-paniculata_contig24631.6680.1 vs. uniprot
Match: D7FS06_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS06_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 6.660e-53
Identity = 114/197 (57.87%), Postives = 136/197 (69.04%), Query Frame = 0
Query:    1 MVLQLLVREPEYYRAAAVASXXXXXXXXXXXXXXXXXXSAALAAGNRRTSVPLTSP--GGLPMAVIGTPTAVAPALPEAPERYSQIVTIWQADCLVCGLSPFDPDTLVLLGYPVDEMIDDXXXXXXXXXXXXDGDDVEKGGAKFQPEVQLVTRSTGEVISADTLPLKGWETAAAGDLLLRSTCFSASYYRQDKESAT 195
            MVLQ+LVREP+Y R  +++                   + +    NRRTSVPLT+P  GGLPMAVIG PTA AP   EAPERY+QIV +WQ+DCL+CGLSPFD DT+VLLG+PV+E         XXXXXXX G+ V   G  FQPEVQLV R +GEVISADT+PL+GWE A AG LLLRSTC+S S Y+ D+E AT
Sbjct:  257 MVLQILVREPKYQRGGSLSPMKQPHLSPQGG-------NGSAGDSNRRTSVPLTNPIGGGLPMAVIGAPTAAAPVALEAPERYTQIVAVWQSDCLICGLSPFDSDTVVLLGFPVEEXX-------XXXXXXXXGEGVVAKGV-FQPEVQLVKRQSGEVISADTVPLRGWEHAGAGQLLLRSTCWSISSYKPDREGAT 438          
BLAST of mRNA_H-paniculata_contig24631.6680.1 vs. uniprot
Match: A0A6H5KF08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF08_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 1.360e-33
Identity = 86/157 (54.78%), Postives = 102/157 (64.97%), Query Frame = 0
Query:    1 MVLQLLVREPEYYRAAAVASXXXXXXXXXXXXXXXXXXSAALAAGNRRTSVPLTSP--GGLPMAVIGTPTAVAPALPEAPERYSQIVTIWQADCLVCGLSPFDPDTLVLLGYPVDEMIDDXXXXXXXXXXXXDGDDVEKGGAKFQPEVQLVTRSTGE 155
            MVLQ+LVREP+Y R  +++                   + +    NRRTSVPLT+P  GGLP+AVIG PTA AP   EAPERY+QIV +WQ+DCL+CGLSPFD DT+VLLGYPV+     XXXXXXXX        V KG   FQPEVQLV R +GE
Sbjct:  179 MVLQILVREPKYQRGGSLSPMRQPHHSPPGG-------NGSAGDNNRRTSVPLTNPIGGGLPIAVIGAPTAAAPVALEAPERYTQIVAVWQSDCLICGLSPFDSDTVVLLGYPVEXXXXXXXXXXXXXV-------VVKG--VFQPEVQLVKRQSGE 319          
BLAST of mRNA_H-paniculata_contig24631.6680.1 vs. uniprot
Match: A0A836CBT2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT2_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.570e-17
Identity = 52/139 (37.41%), Postives = 70/139 (50.36%), Query Frame = 0
Query:   77 APERYSQIVTIWQADCLVCGLSPFDPDTLVLLGYPVDEMIDDXXXXXXXXXXXXDGDDVEKGGAKFQPEVQLVTRSTGE---------------------VISADTLPLKGWETAAAGDLLLRSTCFSASYYRQDKESA 194
            AP+R ++I  +WQ+DCL+CG+SPFD DTLVLLGYPV + + +                  +  A   PEVQLV R+TGE                     V++ADTLPL GW+   AG   + ST +S    R  +  A
Sbjct:  443 APKRVAEITALWQSDCLICGVSPFDADTLVLLGYPVPQSLAE----------------AREAAAAAGPEVQLVRRATGENPGRRVVGHAELVHQLEELRSVLAADTLPLNGWQNNLAGHYCMASTSWSPGAIRWPRGKA 565          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24631.6680.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FS06_ECTSI6.660e-5357.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KF08_9PHAE1.360e-3354.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CBT2_9STRA1.570e-1737.41Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24631contigH-paniculata_contig24631:1131..2663 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24631.6680.1mRNA_H-paniculata_contig24631.6680.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig24631 578..3700 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig24631.6680.1 ID=prot_H-paniculata_contig24631.6680.1|Name=mRNA_H-paniculata_contig24631.6680.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=202bp
MVLQLLVREPEYYRAAAVASSSSSPFNNGNGNGNGNGNSAALAAGNRRTS
VPLTSPGGLPMAVIGTPTAVAPALPEAPERYSQIVTIWQADCLVCGLSPF
DPDTLVLLGYPVDEMIDDDDDDDDDDDDNGDGDDVEKGGAKFQPEVQLVT
RSTGEVISADTLPLKGWETAAAGDLLLRSTCFSASYYRQDKESATMGEFE
T*
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