prot_H-paniculata_contig24482.6632.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig24482.6632.1
Unique Nameprot_H-paniculata_contig24482.6632.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length149
Homology
BLAST of mRNA_H-paniculata_contig24482.6632.1 vs. uniprot
Match: A0A0J7K416_LASNI (Lectin receptor kinase n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K416_LASNI)

HSP 1 Score: 102 bits (255), Expect = 2.480e-23
Identity = 60/155 (38.71%), Postives = 87/155 (56.13%), Query Frame = 0
Query:    1 EPISTVEAIKGPE-------VGTCLAATEEEEWWTLMENGTWESEDPGRIPAWRNAIRTKWIFKRKLKEDGSMARYKARLVGQRFSQVEGEDFDETSAPVARMSKLCTVFRLATEHDFELEGMGVDAAYLNAPVREELFVKLPPSFHLTPETYRL 148
            EP+S  EAIKGPE       +   L A E+   WT+++N          +P  R  I  KWIFK+KL E+G++ RYKARLV + +SQ EG D++ET APV R   + T+   A  + +E+    V  A+LN  + EE+F++LP    +  +  RL
Sbjct:  173 EPVSYEEAIKGPEGEKWKEAINEELDAMEKNSTWTVVKN----------LPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYSQREGIDYEETFAPVVRYETVRTLLAEAAMNKYEIGQFDVKTAFLNGDLEEEIFMELPEGTAVPKQIVRL 317          
BLAST of mRNA_H-paniculata_contig24482.6632.1 vs. uniprot
Match: A0A182GIT5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GIT5_AEDAL)

HSP 1 Score: 103 bits (258), Expect = 3.910e-23
Identity = 56/131 (42.75%), Postives = 78/131 (59.54%), Query Frame = 0
Query:    9 IKGPEVGTCLAATEEEEWWTLMENGTWESEDPGRIPAWRNAIRTKWIFKRKLKEDGSMARYKARLVGQRFSQVEGEDFDETSAPVARMSKLCTVFRLATEHDFELEGMGVDAAYLNAPVREELFVKLPPSF 139
            +KGPE     AA ++E   +L ENGTW+  D   +P  R A+  KWIFKRKL EDG++ RYKARLV Q F+Q  G D+DE  APV R      +  +A++    ++   V  AYLN  + E +F++ PP +
Sbjct:    1 MKGPEAELWKAAMDDE-MTSLRENGTWQLTD---LPPGRKAVGCKWIFKRKLDEDGNVVRYKARLVAQGFTQKFGTDYDEVFAPVVRQVTFRVLLTVASQRGMVVKHADVKTAYLNGELEESIFMRQPPGY 127          
BLAST of mRNA_H-paniculata_contig24482.6632.1 vs. uniprot
Match: A0A5E8C1W8_9ASCO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C1W8_9ASCO)

HSP 1 Score: 101 bits (251), Expect = 4.030e-23
Identity = 55/129 (42.64%), Postives = 78/129 (60.47%), Query Frame = 0
Query:   20 ATEEEEWW---------TLMENGTWESEDPGRIPAWRNAIRTKWIFKRKLKEDGSMARYKARLVGQRFSQVEGEDFDETSAPVARMSKLCTVFRLATEHDFELEGMGVDAAYLNAPVREELFVKLPPSF 139
            ++EE E+W         +L  NGTWE  D   +P  R AI +KW+FK K K DGS+ RYKARLV   FSQVEG D+ ET APV R   +  V  +A +  F++  M V+ A+LN  ++E+++++ P  F
Sbjct:   75 SSEEAEFWLEACVIEMSSLKRNGTWELVD---LPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQPKGF 200          
BLAST of mRNA_H-paniculata_contig24482.6632.1 vs. uniprot
Match: A0A0J7KM48_LASNI (Integrase catalytic domain-containing protein n=2 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KM48_LASNI)

HSP 1 Score: 102 bits (255), Expect = 1.350e-22
Identity = 60/155 (38.71%), Postives = 87/155 (56.13%), Query Frame = 0
Query:    1 EPISTVEAIKGPE-------VGTCLAATEEEEWWTLMENGTWESEDPGRIPAWRNAIRTKWIFKRKLKEDGSMARYKARLVGQRFSQVEGEDFDETSAPVARMSKLCTVFRLATEHDFELEGMGVDAAYLNAPVREELFVKLPPSFHLTPETYRL 148
            EP+S  EAIKGPE       +   L A E+   WT+++N          +P  R  I  KWIFK+KL E+G++ RYKARLV + +SQ EG D++ET APV R   + T+   A  + +E+    V  A+LN  + EE+F++LP    +  +  RL
Sbjct:  548 EPVSYEEAIKGPEGEKWKEAINEELDAMEKNSTWTVVKN----------LPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYSQREGIDYEETFAPVVRYETVRTLLAEAAMNKYEIGQFDVKTAFLNGDLEEEIFMELPEGTAVPKQIVRL 692          
BLAST of mRNA_H-paniculata_contig24482.6632.1 vs. uniprot
Match: Q53ML4_ORYSJ (Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q53ML4_ORYSJ)

HSP 1 Score: 102 bits (255), Expect = 1.450e-22
Identity = 57/116 (49.14%), Postives = 71/116 (61.21%), Query Frame = 0
Query:   24 EEWWTLMENGTWESEDPGRIPAWRNAIRTKWIFKRKLKEDGSMARYKARLVGQRFSQVEGEDFDETSAPVARMSKLCTVFRLATEHDFELEGMGVDAAYLNAPVREELFVKLPPSF 139
            EE      N  W   +P   P+ RN I TKW FK K  EDG + R KARLV Q F+QVEG DFDET APVAR+  +  +F  A    F+L  MGV +A+LN  ++EE++VK PP F
Sbjct: 1009 EELENFERNKVWTLVEP---PSRRNIIGTKWGFKNKQNEDGLIVRNKARLVAQGFTQVEGLDFDETFAPVARIEAIRLLFAFAASKGFKLYQMGVKSAFLNGFIQEEVYVKQPPGF 1121          
BLAST of mRNA_H-paniculata_contig24482.6632.1 vs. uniprot
Match: A0A5E8C149_9ASCO (Integrase catalytic domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C149_9ASCO)

HSP 1 Score: 101 bits (251), Expect = 4.680e-22
Identity = 55/129 (42.64%), Postives = 78/129 (60.47%), Query Frame = 0
Query:   20 ATEEEEWW---------TLMENGTWESEDPGRIPAWRNAIRTKWIFKRKLKEDGSMARYKARLVGQRFSQVEGEDFDETSAPVARMSKLCTVFRLATEHDFELEGMGVDAAYLNAPVREELFVKLPPSF 139
            ++EE E+W         +L  NGTWE  D   +P  R AI +KW+FK K K DGS+ RYKARLV   FSQVEG D+ ET APV R   +  V  +A +  F++  M V+ A+LN  ++E+++++ P  F
Sbjct:  214 SSEEAEFWLEACVIEMSSLKRNGTWELVD---LPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQPKGF 339          
BLAST of mRNA_H-paniculata_contig24482.6632.1 vs. uniprot
Match: A0A5E8C4W4_9ASCO (Integrase catalytic domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C4W4_9ASCO)

HSP 1 Score: 101 bits (251), Expect = 4.810e-22
Identity = 55/129 (42.64%), Postives = 78/129 (60.47%), Query Frame = 0
Query:   20 ATEEEEWW---------TLMENGTWESEDPGRIPAWRNAIRTKWIFKRKLKEDGSMARYKARLVGQRFSQVEGEDFDETSAPVARMSKLCTVFRLATEHDFELEGMGVDAAYLNAPVREELFVKLPPSF 139
            ++EE E+W         +L  NGTWE  D   +P  R AI +KW+FK K K DGS+ RYKARLV   FSQVEG D+ ET APV R   +  V  +A +  F++  M V+ A+LN  ++E+++++ P  F
Sbjct:  716 SSEEAEFWLEACVIEMSSLKRNGTWELVD---LPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQPKGF 841          
BLAST of mRNA_H-paniculata_contig24482.6632.1 vs. uniprot
Match: A0A8H7LQU3_9AGAM (Reverse transcriptase (RNA-dependent DNA polymerase) n=3 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H7LQU3_9AGAM)

HSP 1 Score: 101 bits (251), Expect = 4.840e-22
Identity = 55/138 (39.86%), Postives = 83/138 (60.14%), Query Frame = 0
Query:    8 AIKGPEVGTCLAATEEEEWWTLMEN--GTWESEDPGRI---PAWRNAIRTKWIFKRKLKEDGSMARYKARLVGQRFSQVEGEDFDETSAPVARMSKLCTVFRLATEHDFELEGMGVDAAYLNAPVREELFVKLPPSFH 140
            A   P V   LA  +  EWW  M+N   T++  D  ++   P  R A+  KW+   K  E+G   RYKA+LV Q FSQ  G DFD+T APV R+  +CT+  LA  +++++  + V+AAYL+APV+E+L+++  P F+
Sbjct:  450 AANNPTVEEALAGPQALEWWKAMQNEVSTFDKLDTTKLTKLPHKRKAMGNKWVLMLKRDENGEPVRYKAQLVVQGFSQQPGIDFDKTFAPVVRLDSICTLVLLANNNNWDVRQLDVNAAYLHAPVKEDLYMQQIPYFN 587          
BLAST of mRNA_H-paniculata_contig24482.6632.1 vs. uniprot
Match: A0A5E8CAT7_9ASCO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8CAT7_9ASCO)

HSP 1 Score: 101 bits (251), Expect = 4.850e-22
Identity = 55/129 (42.64%), Postives = 78/129 (60.47%), Query Frame = 0
Query:   20 ATEEEEWW---------TLMENGTWESEDPGRIPAWRNAIRTKWIFKRKLKEDGSMARYKARLVGQRFSQVEGEDFDETSAPVARMSKLCTVFRLATEHDFELEGMGVDAAYLNAPVREELFVKLPPSF 139
            ++EE E+W         +L  NGTWE  D   +P  R AI +KW+FK K K DGS+ RYKARLV   FSQVEG D+ ET APV R   +  V  +A +  F++  M V+ A+LN  ++E+++++ P  F
Sbjct:  458 SSEEAEFWLEACVIEMSSLKRNGTWELVD---LPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQPKGF 583          
BLAST of mRNA_H-paniculata_contig24482.6632.1 vs. uniprot
Match: A0A5E8C4Z1_9ASCO (Integrase catalytic domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C4Z1_9ASCO)

HSP 1 Score: 101 bits (251), Expect = 4.890e-22
Identity = 55/129 (42.64%), Postives = 78/129 (60.47%), Query Frame = 0
Query:   20 ATEEEEWW---------TLMENGTWESEDPGRIPAWRNAIRTKWIFKRKLKEDGSMARYKARLVGQRFSQVEGEDFDETSAPVARMSKLCTVFRLATEHDFELEGMGVDAAYLNAPVREELFVKLPPSF 139
            ++EE E+W         +L  NGTWE  D   +P  R AI +KW+FK K K DGS+ RYKARLV   FSQVEG D+ ET APV R   +  V  +A +  F++  M V+ A+LN  ++E+++++ P  F
Sbjct:  550 SSEEAEFWLEACVIEMSSLKRNGTWELVD---LPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQPKGF 675          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24482.6632.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0J7K416_LASNI2.480e-2338.71Lectin receptor kinase n=1 Tax=Lasius niger TaxID=... [more]
A0A182GIT5_AEDAL3.910e-2342.75Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5E8C1W8_9ASCO4.030e-2342.64Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0J7KM48_LASNI1.350e-2238.71Integrase catalytic domain-containing protein n=2 ... [more]
Q53ML4_ORYSJ1.450e-2249.14Retrotransposon protein, putative, Ty1-copia subcl... [more]
A0A5E8C149_9ASCO4.680e-2242.64Integrase catalytic domain-containing protein n=1 ... [more]
A0A5E8C4W4_9ASCO4.810e-2242.64Integrase catalytic domain-containing protein n=1 ... [more]
A0A8H7LQU3_9AGAM4.840e-2239.86Reverse transcriptase (RNA-dependent DNA polymeras... [more]
A0A5E8CAT7_9ASCO4.850e-2242.64Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5E8C4Z1_9ASCO4.890e-2242.64Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 43..143
e-value: 1.1E-23
score: 84.1
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 22..142
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 22..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24482contigH-paniculata_contig24482:2196..2642 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24482.6632.1mRNA_H-paniculata_contig24482.6632.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig24482 2196..2642 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig24482.6632.1 ID=prot_H-paniculata_contig24482.6632.1|Name=mRNA_H-paniculata_contig24482.6632.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=149bp
EPISTVEAIKGPEVGTCLAATEEEEWWTLMENGTWESEDPGRIPAWRNAI
RTKWIFKRKLKEDGSMARYKARLVGQRFSQVEGEDFDETSAPVARMSKLC
TVFRLATEHDFELEGMGVDAAYLNAPVREELFVKLPPSFHLTPETYRLW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like