mRNA_H-paniculata_contig24482.6632.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig24482.6632.1 vs. uniprot
Match: A0A0J7K416_LASNI (Lectin receptor kinase n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K416_LASNI) HSP 1 Score: 102 bits (255), Expect = 2.480e-23 Identity = 60/155 (38.71%), Postives = 87/155 (56.13%), Query Frame = 1
Query: 1 EPISTVEAIKGPE-------VGTCLAATEEEEWWTLMENGTWESEDPGRIPAWRNAIRTKWIFKRKLKEDGSMARYKARLVGQRFSQVEGEDFDETSAPVARMSKLCTVFRLATEHDFELEGMGVDAAYLNAPVREELFVKLPPSFHLTPETYRL 444
EP+S EAIKGPE + L A E+ WT+++N +P R I KWIFK+KL E+G++ RYKARLV + +SQ EG D++ET APV R + T+ A + +E+ V A+LN + EE+F++LP + + RL
Sbjct: 173 EPVSYEEAIKGPEGEKWKEAINEELDAMEKNSTWTVVKN----------LPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYSQREGIDYEETFAPVVRYETVRTLLAEAAMNKYEIGQFDVKTAFLNGDLEEEIFMELPEGTAVPKQIVRL 317
BLAST of mRNA_H-paniculata_contig24482.6632.1 vs. uniprot
Match: A0A182GIT5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GIT5_AEDAL) HSP 1 Score: 103 bits (258), Expect = 3.910e-23 Identity = 56/131 (42.75%), Postives = 78/131 (59.54%), Query Frame = 1
Query: 25 IKGPEVGTCLAATEEEEWWTLMENGTWESEDPGRIPAWRNAIRTKWIFKRKLKEDGSMARYKARLVGQRFSQVEGEDFDETSAPVARMSKLCTVFRLATEHDFELEGMGVDAAYLNAPVREELFVKLPPSF 417
+KGPE AA ++E +L ENGTW+ D +P R A+ KWIFKRKL EDG++ RYKARLV Q F+Q G D+DE APV R + +A++ ++ V AYLN + E +F++ PP +
Sbjct: 1 MKGPEAELWKAAMDDE-MTSLRENGTWQLTD---LPPGRKAVGCKWIFKRKLDEDGNVVRYKARLVAQGFTQKFGTDYDEVFAPVVRQVTFRVLLTVASQRGMVVKHADVKTAYLNGELEESIFMRQPPGY 127
BLAST of mRNA_H-paniculata_contig24482.6632.1 vs. uniprot
Match: A0A5E8C1W8_9ASCO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C1W8_9ASCO) HSP 1 Score: 101 bits (251), Expect = 4.030e-23 Identity = 55/129 (42.64%), Postives = 78/129 (60.47%), Query Frame = 1
Query: 58 ATEEEEWW---------TLMENGTWESEDPGRIPAWRNAIRTKWIFKRKLKEDGSMARYKARLVGQRFSQVEGEDFDETSAPVARMSKLCTVFRLATEHDFELEGMGVDAAYLNAPVREELFVKLPPSF 417
++EE E+W +L NGTWE D +P R AI +KW+FK K K DGS+ RYKARLV FSQVEG D+ ET APV R + V +A + F++ M V+ A+LN ++E+++++ P F
Sbjct: 75 SSEEAEFWLEACVIEMSSLKRNGTWELVD---LPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQPKGF 200
BLAST of mRNA_H-paniculata_contig24482.6632.1 vs. uniprot
Match: A0A0J7KM48_LASNI (Integrase catalytic domain-containing protein n=2 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KM48_LASNI) HSP 1 Score: 102 bits (255), Expect = 1.350e-22 Identity = 60/155 (38.71%), Postives = 87/155 (56.13%), Query Frame = 1
Query: 1 EPISTVEAIKGPE-------VGTCLAATEEEEWWTLMENGTWESEDPGRIPAWRNAIRTKWIFKRKLKEDGSMARYKARLVGQRFSQVEGEDFDETSAPVARMSKLCTVFRLATEHDFELEGMGVDAAYLNAPVREELFVKLPPSFHLTPETYRL 444
EP+S EAIKGPE + L A E+ WT+++N +P R I KWIFK+KL E+G++ RYKARLV + +SQ EG D++ET APV R + T+ A + +E+ V A+LN + EE+F++LP + + RL
Sbjct: 548 EPVSYEEAIKGPEGEKWKEAINEELDAMEKNSTWTVVKN----------LPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYSQREGIDYEETFAPVVRYETVRTLLAEAAMNKYEIGQFDVKTAFLNGDLEEEIFMELPEGTAVPKQIVRL 692
BLAST of mRNA_H-paniculata_contig24482.6632.1 vs. uniprot
Match: Q53ML4_ORYSJ (Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q53ML4_ORYSJ) HSP 1 Score: 102 bits (255), Expect = 1.450e-22 Identity = 57/116 (49.14%), Postives = 71/116 (61.21%), Query Frame = 1
Query: 70 EEWWTLMENGTWESEDPGRIPAWRNAIRTKWIFKRKLKEDGSMARYKARLVGQRFSQVEGEDFDETSAPVARMSKLCTVFRLATEHDFELEGMGVDAAYLNAPVREELFVKLPPSF 417
EE N W +P P+ RN I TKW FK K EDG + R KARLV Q F+QVEG DFDET APVAR+ + +F A F+L MGV +A+LN ++EE++VK PP F
Sbjct: 1009 EELENFERNKVWTLVEP---PSRRNIIGTKWGFKNKQNEDGLIVRNKARLVAQGFTQVEGLDFDETFAPVARIEAIRLLFAFAASKGFKLYQMGVKSAFLNGFIQEEVYVKQPPGF 1121
BLAST of mRNA_H-paniculata_contig24482.6632.1 vs. uniprot
Match: A0A5E8C149_9ASCO (Integrase catalytic domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C149_9ASCO) HSP 1 Score: 101 bits (251), Expect = 4.680e-22 Identity = 55/129 (42.64%), Postives = 78/129 (60.47%), Query Frame = 1
Query: 58 ATEEEEWW---------TLMENGTWESEDPGRIPAWRNAIRTKWIFKRKLKEDGSMARYKARLVGQRFSQVEGEDFDETSAPVARMSKLCTVFRLATEHDFELEGMGVDAAYLNAPVREELFVKLPPSF 417
++EE E+W +L NGTWE D +P R AI +KW+FK K K DGS+ RYKARLV FSQVEG D+ ET APV R + V +A + F++ M V+ A+LN ++E+++++ P F
Sbjct: 214 SSEEAEFWLEACVIEMSSLKRNGTWELVD---LPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQPKGF 339
BLAST of mRNA_H-paniculata_contig24482.6632.1 vs. uniprot
Match: A0A5E8C4W4_9ASCO (Integrase catalytic domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C4W4_9ASCO) HSP 1 Score: 101 bits (251), Expect = 4.810e-22 Identity = 55/129 (42.64%), Postives = 78/129 (60.47%), Query Frame = 1
Query: 58 ATEEEEWW---------TLMENGTWESEDPGRIPAWRNAIRTKWIFKRKLKEDGSMARYKARLVGQRFSQVEGEDFDETSAPVARMSKLCTVFRLATEHDFELEGMGVDAAYLNAPVREELFVKLPPSF 417
++EE E+W +L NGTWE D +P R AI +KW+FK K K DGS+ RYKARLV FSQVEG D+ ET APV R + V +A + F++ M V+ A+LN ++E+++++ P F
Sbjct: 716 SSEEAEFWLEACVIEMSSLKRNGTWELVD---LPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQPKGF 841
BLAST of mRNA_H-paniculata_contig24482.6632.1 vs. uniprot
Match: A0A8H7LQU3_9AGAM (Reverse transcriptase (RNA-dependent DNA polymerase) n=3 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H7LQU3_9AGAM) HSP 1 Score: 101 bits (251), Expect = 4.840e-22 Identity = 55/138 (39.86%), Postives = 83/138 (60.14%), Query Frame = 1
Query: 22 AIKGPEVGTCLAATEEEEWWTLMEN--GTWESEDPGRI---PAWRNAIRTKWIFKRKLKEDGSMARYKARLVGQRFSQVEGEDFDETSAPVARMSKLCTVFRLATEHDFELEGMGVDAAYLNAPVREELFVKLPPSFH 420
A P V LA + EWW M+N T++ D ++ P R A+ KW+ K E+G RYKA+LV Q FSQ G DFD+T APV R+ +CT+ LA +++++ + V+AAYL+APV+E+L+++ P F+
Sbjct: 450 AANNPTVEEALAGPQALEWWKAMQNEVSTFDKLDTTKLTKLPHKRKAMGNKWVLMLKRDENGEPVRYKAQLVVQGFSQQPGIDFDKTFAPVVRLDSICTLVLLANNNNWDVRQLDVNAAYLHAPVKEDLYMQQIPYFN 587
BLAST of mRNA_H-paniculata_contig24482.6632.1 vs. uniprot
Match: A0A5E8CAT7_9ASCO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8CAT7_9ASCO) HSP 1 Score: 101 bits (251), Expect = 4.850e-22 Identity = 55/129 (42.64%), Postives = 78/129 (60.47%), Query Frame = 1
Query: 58 ATEEEEWW---------TLMENGTWESEDPGRIPAWRNAIRTKWIFKRKLKEDGSMARYKARLVGQRFSQVEGEDFDETSAPVARMSKLCTVFRLATEHDFELEGMGVDAAYLNAPVREELFVKLPPSF 417
++EE E+W +L NGTWE D +P R AI +KW+FK K K DGS+ RYKARLV FSQVEG D+ ET APV R + V +A + F++ M V+ A+LN ++E+++++ P F
Sbjct: 458 SSEEAEFWLEACVIEMSSLKRNGTWELVD---LPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQPKGF 583
BLAST of mRNA_H-paniculata_contig24482.6632.1 vs. uniprot
Match: A0A5E8C4Z1_9ASCO (Integrase catalytic domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C4Z1_9ASCO) HSP 1 Score: 101 bits (251), Expect = 4.890e-22 Identity = 55/129 (42.64%), Postives = 78/129 (60.47%), Query Frame = 1
Query: 58 ATEEEEWW---------TLMENGTWESEDPGRIPAWRNAIRTKWIFKRKLKEDGSMARYKARLVGQRFSQVEGEDFDETSAPVARMSKLCTVFRLATEHDFELEGMGVDAAYLNAPVREELFVKLPPSF 417
++EE E+W +L NGTWE D +P R AI +KW+FK K K DGS+ RYKARLV FSQVEG D+ ET APV R + V +A + F++ M V+ A+LN ++E+++++ P F
Sbjct: 550 SSEEAEFWLEACVIEMSSLKRNGTWELVD---LPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQPKGF 675 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24482.6632.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig24482.6632.1 >prot_H-paniculata_contig24482.6632.1 ID=prot_H-paniculata_contig24482.6632.1|Name=mRNA_H-paniculata_contig24482.6632.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=149bp EPISTVEAIKGPEVGTCLAATEEEEWWTLMENGTWESEDPGRIPAWRNAIback to top mRNA from alignment at H-paniculata_contig24482:2196..2642- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig24482.6632.1 ID=mRNA_H-paniculata_contig24482.6632.1|Name=mRNA_H-paniculata_contig24482.6632.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=447bp|location=Sequence derived from alignment at H-paniculata_contig24482:2196..2642- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig24482:2196..2642- >mRNA_H-paniculata_contig24482.6632.1 ID=mRNA_H-paniculata_contig24482.6632.1|Name=mRNA_H-paniculata_contig24482.6632.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=894bp|location=Sequence derived from alignment at H-paniculata_contig24482:2196..2642- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |