prot_H-paniculata_contig2409.6521.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2409.6521.1
Unique Nameprot_H-paniculata_contig2409.6521.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length124
Homology
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BLAST of mRNA_H-paniculata_contig2409.6521.1 vs. uniprot
Match: A0A6H5LCY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCY2_9PHAE)

HSP 1 Score: 50.8 bits (120), Expect = 8.840e-5
Identity = 40/101 (39.60%), Postives = 57/101 (56.44%), Query Frame = 0 
Query:    4 IVSDKYPPPSTCLHPTLAQYCLNRYADPKDPVLVTSGEGDNLADLVLGSGRLHPAHMENSDKLDLVNERVIAACNEAVKKGLFVTVM-MGVPIVIGPSTLP 103
            I+S K+P  +T L P++A + LNR+    D VLV++ E +NLA LVL SGR   A + +  K   V  +V +A   A+  G F  +   GVP+  G S LP
Sbjct:  683 IISQKHPS-ATFLAPSMADHLLNRFTSAGDKVLVSAFEDNNLASLVLTSGRRLFALVGDPAKAVSVGRQVKSALATAMTAGWFKALANAGVPL--GGSVLP 780
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2409.6521.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LCY2_9PHAE8.840e-539.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2409contigH-paniculata_contig2409:9011..9545 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2409.6521.1mRNA_H-paniculata_contig2409.6521.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2409 7951..10975 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2409.6521.1 ID=prot_H-paniculata_contig2409.6521.1|Name=mRNA_H-paniculata_contig2409.6521.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=124bp
MSAIVSDKYPPPSTCLHPTLAQYCLNRYADPKDPVLVTSGEGDNLADLVL
GSGRLHPAHMENSDKLDLVNERVIAACNEAVKKGLFVTVMMGVPIVIGPS
TLPVNVQRGGYDRGGARKAGGGA*
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