prot_H-paniculata_contig2401.6498.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2401.6498.1
Unique Nameprot_H-paniculata_contig2401.6498.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length90
Homology
BLAST of mRNA_H-paniculata_contig2401.6498.1 vs. uniprot
Match: A0A6H5JGF9_9PHAE (Complex1_LYR_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGF9_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 1.760e-28
Identity = 59/88 (67.05%), Postives = 69/88 (78.41%), Query Frame = 0
Query:    1 MSGRASGVQREVTHLYRRVLRAARLKDSESNSTSTSDLVKTEFREQATSVGRTDFRTIEHLIRAGNKKLKLLSMPGMRAAEALTVNHR 88
            MS R SGVQREV  LYR +LRAAR+KD    + ST++LV+ EFR QA SV RTDFRTIEHL+RAGNKKLKLL MPG++AA  +TV  R
Sbjct:    1 MSARLSGVQREVNKLYRLLLRAARVKDGGEWAGSTTELVRAEFRAQAESVARTDFRTIEHLLRAGNKKLKLLKMPGVKAAAGITVVRR 88          
BLAST of mRNA_H-paniculata_contig2401.6498.1 vs. uniprot
Match: D7FX23_ECTSI (Heat shock protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX23_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 5.010e-25
Identity = 55/86 (63.95%), Postives = 66/86 (76.74%), Query Frame = 0
Query:    3 GRASGVQREVTHLYRRVLRAARLKDSESNSTSTSDLVKTEFREQATSVGRTDFRTIEHLIRAGNKKLKLLSMPGMRAAEALTVNHR 88
            G  S  +REV  LYR +LRAAR+KD    + ST++LV+ EFR QA SVGRTDFRTIEHL+RAGNKKLKLL MPG++AA  +TV  R
Sbjct:   49 GIQSPTKREVNQLYRLLLRAARVKDGGEWAGSTTELVRAEFRAQAESVGRTDFRTIEHLLRAGNKKLKLLKMPGVKAAAGITVARR 134          
BLAST of mRNA_H-paniculata_contig2401.6498.1 vs. uniprot
Match: I2CRH0_NANGC (Lyr family of fe s cluster biogenesis protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRH0_NANGC)

HSP 1 Score: 79.0 bits (193), Expect = 2.500e-17
Identity = 45/81 (55.56%), Postives = 57/81 (70.37%), Query Frame = 0
Query:    4 RASGVQREVTHLYRRVLRAARLKDSESNSTSTSDLVKTEFREQATSVGRTDFRTIEHLIRAGNKKLKLLSMPGMRAAEALT 84
            RASG+Q+EV  LYRRVLRAAR+KD+      T  L +T FRE ATSV R DF+ IE LIR G+K+LK L+MP +    ++T
Sbjct:    5 RASGLQKEVLSLYRRVLRAARVKDAGKIDGGTYTLARTRFREDATSVSRMDFQKIEFLIRQGHKQLKYLNMPSVLRGASVT 85          
BLAST of mRNA_H-paniculata_contig2401.6498.1 vs. uniprot
Match: A0A7S3Y3W0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3W0_HETAK)

HSP 1 Score: 72.8 bits (177), Expect = 1.440e-14
Identity = 42/83 (50.60%), Postives = 57/83 (68.67%), Query Frame = 0
Query:    4 RASGVQREVTHLYRRVLRAARLKD--SESNSTSTSDLVKTEFREQATSVGRTDFRTIEHLIRAGNKKLKLLSMPGMRAAEALT 84
            R SG+Q+EV  LYR+ LR AR KD  S SN  S  +  ++EFREQA+ V ++DF+TIEH+IR G K++KL +MPG +     T
Sbjct:   34 RLSGLQQEVLALYRQCLRVARKKDLGSSSNVRSLYEYCRSEFREQASKVKKSDFQTIEHMIRHGKKQMKLAAMPGFQGMTHFT 116          
BLAST of mRNA_H-paniculata_contig2401.6498.1 vs. uniprot
Match: A0A6U0URI4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0URI4_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 2.900e-8
Identity = 32/67 (47.76%), Postives = 47/67 (70.15%), Query Frame = 0
Query:    6 SGVQREVTHLYRRVLRAARLKDSESNSTSTSDLVKTEFREQATSVGRTDFRTIEHLIRAGNKKLKLL 72
            SGVQ EV +LYR++LR A+ K  ++ +     +V+ +FRE A SV R++ R IEHL+R G KK++LL
Sbjct:   65 SGVQTEVLNLYRQLLRLAKAKGPDTYA-----MVRNKFREDARSVKRSEIRLIEHLVRQGKKKVRLL 126          
BLAST of mRNA_H-paniculata_contig2401.6498.1 vs. uniprot
Match: A0A0W0DRB0_CANGB (Succinate dehydrogenase assembly factor 1, mitochondrial n=2 Tax=Candida glabrata TaxID=5478 RepID=A0A0W0DRB0_CANGB)

HSP 1 Score: 54.3 bits (129), Expect = 8.980e-8
Identity = 33/78 (42.31%), Postives = 46/78 (58.97%), Query Frame = 0
Query:    1 MSGRASGVQREVTHLYRRVLRAARLKDSESNSTSTSDLVKTEFREQATSVGRTDFRTIEHLIRAGNKKLKLLSMPGMR 78
            M+ + SG+QREV HLYR  +R A  K  E N       +  EF +    + R DF TIEHL+R GN++LK+ S P ++
Sbjct:    1 MARKLSGLQREVIHLYRSAVRVAHTKPVE-NQPHFLQFIHAEFSKYR-DLPRKDFTTIEHLLRVGNRRLKMYSQPELK 76          
BLAST of mRNA_H-paniculata_contig2401.6498.1 vs. uniprot
Match: A0A1G4KNI3_9SACH (LANO_0H21902g1_1 n=1 Tax=Lachancea nothofagi CBS 11611 TaxID=1266666 RepID=A0A1G4KNI3_9SACH)

HSP 1 Score: 52.8 bits (125), Expect = 3.610e-7
Identity = 32/73 (43.84%), Postives = 46/73 (63.01%), Query Frame = 0
Query:    1 MSGRASGVQREVTHLYRRVLRAARLKDSESNSTSTSDLVKTEFREQATSVGRTDFRTIEHLIRAGNKKLKLLS 73
            M+ R SG+QREV  +YR  +RAA  K   +N  +    ++TEF +    + R DF TIEHL+R GN++LK+ S
Sbjct:    1 MAKRISGLQREVLQVYRHCIRAAHRKPL-TNQPNFVRYIRTEFSKYR-DISRKDFSTIEHLLRVGNRRLKMYS 71          
BLAST of mRNA_H-paniculata_contig2401.6498.1 vs. uniprot
Match: K3X5D9_GLOUD (Complex1_LYR_dom domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5D9_GLOUD)

HSP 1 Score: 53.5 bits (127), Expect = 3.620e-7
Identity = 34/75 (45.33%), Postives = 46/75 (61.33%), Query Frame = 0
Query:    6 SGVQREVTHLYRRVLRAARLKDSE-----SNST---STSDLVKTEFREQATSVGRTDFRTIEHLIRAGNKKLKLL 72
            SG+Q +V  LY++ LR A+ KD E     S +T   ST   V+  FR+ A SVGR DF  IEHLIR G + +K++
Sbjct:   20 SGLQMQVLALYKKALRTAQQKDRELVAASSGATAEVSTLTYVRERFRDDARSVGRMDFNVIEHLIRKGERDIKMM 94          
BLAST of mRNA_H-paniculata_contig2401.6498.1 vs. uniprot
Match: G8JSD8_ERECY (Complex1_LYR_dom domain-containing protein n=1 Tax=Eremothecium cymbalariae (strain CBS 270.75 / DBVPG 7215 / KCTC 17166 / NRRL Y-17582) TaxID=931890 RepID=G8JSD8_ERECY)

HSP 1 Score: 52.0 bits (123), Expect = 7.230e-7
Identity = 35/78 (44.87%), Postives = 47/78 (60.26%), Query Frame = 0
Query:    1 MSGRASGVQREVTHLYRRVLRAARLKDSESNSTSTSDLVKTEFREQATSVGRTDFRTIEHLIRAGNKKLKLLSMPGMR 78
            M  R SG+QREV HLYRR +R A  K S+S     S  ++ EF +    V + DF TIE+LIR G+KK+   S P ++
Sbjct:    1 MVRRLSGLQREVLHLYRRSIRVAYNKSSDSRPHFVS-FIRKEFAKYR-DVPKKDFNTIEYLIRIGHKKVDTYSSPELK 76          
BLAST of mRNA_H-paniculata_contig2401.6498.1 vs. uniprot
Match: A0A7S1ZYE5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZYE5_TRICV)

HSP 1 Score: 52.0 bits (123), Expect = 1.630e-6
Identity = 24/43 (55.81%), Postives = 34/43 (79.07%), Query Frame = 0
Query:   35 TSDLVKTEFREQATSVGRTDFRTIEHLIRAGNKKLKLLSMPGM 77
            T+   ++EFR++A S+ R DFRTIEH+IR G K++KLL MPG+
Sbjct:   62 TTSYARSEFRKKAASIPRNDFRTIEHMIRWGQKQIKLLRMPGV 104          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2401.6498.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A6H5JGF9_9PHAE1.760e-2867.05Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
D7FX23_ECTSI5.010e-2563.95Heat shock protein, putative n=1 Tax=Ectocarpus si... [more]
I2CRH0_NANGC2.500e-1755.56Lyr family of fe s cluster biogenesis protein n=1 ... [more]
A0A7S3Y3W0_HETAK1.440e-1450.60Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6U0URI4_9STRA2.900e-847.76Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A0W0DRB0_CANGB8.980e-842.31Succinate dehydrogenase assembly factor 1, mitocho... [more]
A0A1G4KNI3_9SACH3.610e-743.84LANO_0H21902g1_1 n=1 Tax=Lachancea nothofagi CBS 1... [more]
K3X5D9_GLOUD3.620e-745.33Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
G8JSD8_ERECY7.230e-744.87Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A7S1ZYE5_TRICV1.630e-655.81Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR proteinPFAMPF05347Complex1_LYRcoord: 10..70
e-value: 4.3E-12
score: 45.9
NoneNo IPR availablePANTHERPTHR13675:SF1SUCCINATE DEHYDROGENASE ASSEMBLY FACTOR 1, MITOCHONDRIALcoord: 4..86
NoneNo IPR availablePANTHERPTHR13675LYR MOTIF-CONTAINING PROTEIN 2coord: 4..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2401contigH-paniculata_contig2401:3926..5478 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2401.6498.1mRNA_H-paniculata_contig2401.6498.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2401 3710..6373 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2401.6498.1 ID=prot_H-paniculata_contig2401.6498.1|Name=mRNA_H-paniculata_contig2401.6498.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=90bp
MSGRASGVQREVTHLYRRVLRAARLKDSESNSTSTSDLVKTEFREQATSV
GRTDFRTIEHLIRAGNKKLKLLSMPGMRAAEALTVNHRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008011Complex1_LYR