prot_H-paniculata_contig2188.5778.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2188.5778.1
Unique Nameprot_H-paniculata_contig2188.5778.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length190
Homology
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BLAST of mRNA_H-paniculata_contig2188.5778.1 vs. uniprot
Match: A0A836CK74_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK74_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 3.130e-11
Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 0 
Query:   66 LEAFKMAVYLGLPVGAVAIYSNPSVMQSVLNHYKFIEYPPEGPKPPTNKEIWAMINAKDKER-------AEQAAAEAAGAVA 140
            LEAFK ++YL +PV A  +Y++P  M+++L  YKF+EYPPEGPK PT  E+  MI   +K +       A++AAA+ AG  A
Sbjct:   13 LEAFKFSLYLIVPVVATVVYNSPENMRALLQRYKFVEYPPEGPKLPTGDEMNDMIREGEKRQTYLKEQLAQRAAAQDAGPAA 94
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BLAST of mRNA_H-paniculata_contig2188.5778.1 vs. uniprot
Match: A0A7S2WWS6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WWS6_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.570e-10
Identity = 28/77 (36.36%), Postives = 53/77 (68.83%), Query Frame = 0 
Query:   54 WWSQTNPRKRLG-LEAFKMAVYLGLPVGAVAIYSNPSVMQSVLNHYKFIEYPPEGPKPPTNKEIWAMINAKDKERAE 129
            WW  ++ ++  G +E FK A+YL +PV A  +Y +P  M++++N +++I YPPEGP+PP   ++  ++  +D+++AE
Sbjct:   42 WWGSSHVKRGGGRVEMFKFAIYLTIPVVASLLYGDPKTMEAIINRFRYIIYPPEGPRPPEGDQLVKILK-EDRQKAE 117
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BLAST of mRNA_H-paniculata_contig2188.5778.1 vs. uniprot
Match: A0A7S3C7F7_9CHLO (Hypothetical protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3C7F7_9CHLO)

HSP 1 Score: 63.5 bits (153), Expect = 6.740e-10
Identity = 27/67 (40.30%), Postives = 45/67 (67.16%), Query Frame = 0 
Query:   66 LEAFKMAVYLGLPVG-AVAIYSNPSVMQSVLNHYKFIEYPPEGPKPPTNKEIWAMINAKDKERAEQA 131
            LEAFK A YL +P+G  V +  NP+++  V+ + K++ YPPEGP+PP+N+E+W  +  + ++    A
Sbjct:   38 LEAFKFACYLAVPIGMTVFVAYNPTMLNKVIQNRKYVVYPPEGPRPPSNEELWEKLGKRSQDNGSAA 104
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BLAST of mRNA_H-paniculata_contig2188.5778.1 vs. uniprot
Match: C1E4I1_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E4I1_MICCC)

HSP 1 Score: 58.9 bits (141), Expect = 1.750e-8
Identity = 27/68 (39.71%), Postives = 44/68 (64.71%), Query Frame = 0 
Query:   61 RKRLGLEAFKMAVYLGLPVG-AVAIYSNPSVMQSVLNHYKFIEYPPEGPKPPTNKEIWAMINAKDKER 127
            + R GLE FK AVY+ +P+   V   +NP  ++S++  + ++ YPPEGPKPPT  E+  ++ A  K++
Sbjct:    3 KPRYGLEVFKFAVYVSVPIFLTVTFAANPVNLESIIRRHAYVVYPPEGPKPPTAAEMRKIVEANKKKK 70
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2188.5778.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A836CK74_9STRA3.130e-1146.34Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2WWS6_9STRA1.570e-1036.36Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3C7F7_9CHLO6.740e-1040.30Hypothetical protein n=1 Tax=Chloropicon roscoffen... [more]
C1E4I1_MICCC1.750e-839.71Uncharacterized protein n=1 Tax=Micromonas commoda... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018625Protein Pet100PFAMPF09803Pet100coord: 66..131
e-value: 6.0E-7
score: 29.9
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..67
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 87..189
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2188contigH-paniculata_contig2188:10351..20556 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2188.5778.1mRNA_H-paniculata_contig2188.5778.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2188 10337..22339 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2188.5778.1 ID=prot_H-paniculata_contig2188.5778.1|Name=mRNA_H-paniculata_contig2188.5778.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=190bp
MEDRRDVFRHQFLTARETGEKRIQEEGQKTQRHIAQSDRHPSSSSNTSSS
LIMWWSQTNPRKRLGLEAFKMAVYLGLPVGAVAIYSNPSVMQSVLNHYKF
IEYPPEGPKPPTNKEIWAMINAKDKERAEQAAAEAAGAVARSTAALPALA
VTASEELNAEQFPVGGRTQGQNEDCASKKGGWFGWLRRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018625Pet100