mRNA_H-paniculata_contig2188.5778.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2188.5778.1
Unique NamemRNA_H-paniculata_contig2188.5778.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig2188.5778.1 vs. uniprot
Match: A0A836CK74_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK74_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 8.040e-10
Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 3 
Query:  210 LEAFKMAVYLGLPVGAVAIYSNPSVMQSVLNHYKFIEYPPEGPKPPTNKEIWAMINAKDKER-------AEQAAAEAAGAVA 434
            LEAFK ++YL +PV A  +Y++P  M+++L  YKF+EYPPEGPK PT  E+  MI   +K +       A++AAA+ AG  A
Sbjct:   13 LEAFKFSLYLIVPVVATVVYNSPENMRALLQRYKFVEYPPEGPKLPTGDEMNDMIREGEKRQTYLKEQLAQRAAAQDAGPAA 94
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BLAST of mRNA_H-paniculata_contig2188.5778.1 vs. uniprot
Match: A0A7S2WWS6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WWS6_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 3.510e-9
Identity = 28/77 (36.36%), Postives = 53/77 (68.83%), Query Frame = 3 
Query:  174 WWSQTNPRKRLG-LEAFKMAVYLGLPVGAVAIYSNPSVMQSVLNHYKFIEYPPEGPKPPTNKEIWAMINAKDKERAE 401
            WW  ++ ++  G +E FK A+YL +PV A  +Y +P  M++++N +++I YPPEGP+PP   ++  ++  +D+++AE
Sbjct:   42 WWGSSHVKRGGGRVEMFKFAIYLTIPVVASLLYGDPKTMEAIINRFRYIIYPPEGPRPPEGDQLVKILK-EDRQKAE 117
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BLAST of mRNA_H-paniculata_contig2188.5778.1 vs. uniprot
Match: A0A7S3C7F7_9CHLO (Hypothetical protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3C7F7_9CHLO)

HSP 1 Score: 63.5 bits (153), Expect = 1.220e-8
Identity = 27/67 (40.30%), Postives = 45/67 (67.16%), Query Frame = 3 
Query:  210 LEAFKMAVYLGLPVG-AVAIYSNPSVMQSVLNHYKFIEYPPEGPKPPTNKEIWAMINAKDKERAEQA 407
            LEAFK A YL +P+G  V +  NP+++  V+ + K++ YPPEGP+PP+N+E+W  +  + ++    A
Sbjct:   38 LEAFKFACYLAVPIGMTVFVAYNPTMLNKVIQNRKYVVYPPEGPRPPSNEELWEKLGKRSQDNGSAA 104
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BLAST of mRNA_H-paniculata_contig2188.5778.1 vs. uniprot
Match: C1E4I1_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E4I1_MICCC)

HSP 1 Score: 58.9 bits (141), Expect = 2.180e-7
Identity = 27/68 (39.71%), Postives = 44/68 (64.71%), Query Frame = 3 
Query:  195 RKRLGLEAFKMAVYLGLPVG-AVAIYSNPSVMQSVLNHYKFIEYPPEGPKPPTNKEIWAMINAKDKER 395
            + R GLE FK AVY+ +P+   V   +NP  ++S++  + ++ YPPEGPKPPT  E+  ++ A  K++
Sbjct:    3 KPRYGLEVFKFAVYVSVPIFLTVTFAANPVNLESIIRRHAYVVYPPEGPKPPTAAEMRKIVEANKKKK 70
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2188.5778.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A836CK74_9STRA8.040e-1046.34Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2WWS6_9STRA3.510e-936.36Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3C7F7_9CHLO1.220e-840.30Hypothetical protein n=1 Tax=Chloropicon roscoffen... [more]
C1E4I1_MICCC2.180e-739.71Uncharacterized protein n=1 Tax=Micromonas commoda... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2188contigH-paniculata_contig2188:10337..22339 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score66.6
Seed ortholog evalue1.4e-08
Seed eggNOG ortholog38833.XP_003057669.1
KEGG koko:K18187
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Pet100
EggNOG OGs2CYCQ@1,2S3KV@2759,37W49@33090
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-05_004550.1
COG Functional cat.S
Best tax levelViridiplantae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03029
Exons5
Model size2367
Cds size570
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929596.910553-UTR-H-paniculata_contig2188:10336..103501622929596.910553-UTR-H-paniculata_contig2188:10336..10350Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2188 10337..10350 +
1691480929.2467144-UTR-H-paniculata_contig2188:10336..103501691480929.2467144-UTR-H-paniculata_contig2188:10336..10350Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2188 10337..10350 +
1622929596.9917107-UTR-H-paniculata_contig2188:20556..223391622929596.9917107-UTR-H-paniculata_contig2188:20556..22339Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2188 20557..22339 +
1691480929.310029-UTR-H-paniculata_contig2188:20556..223391691480929.310029-UTR-H-paniculata_contig2188:20556..22339Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2188 20557..22339 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929596.9211528-CDS-H-paniculata_contig2188:10350..104451622929596.9211528-CDS-H-paniculata_contig2188:10350..10445Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2188 10351..10445 +
1691480929.2599032-CDS-H-paniculata_contig2188:10350..104451691480929.2599032-CDS-H-paniculata_contig2188:10350..10445Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2188 10351..10445 +
1622929596.933283-CDS-H-paniculata_contig2188:16175..163091622929596.933283-CDS-H-paniculata_contig2188:16175..16309Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2188 16176..16309 +
1691480929.2747693-CDS-H-paniculata_contig2188:16175..163091691480929.2747693-CDS-H-paniculata_contig2188:16175..16309Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2188 16176..16309 +
1622929596.9469118-CDS-H-paniculata_contig2188:17817..178791622929596.9469118-CDS-H-paniculata_contig2188:17817..17879Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2188 17818..17879 +
1691480929.2850523-CDS-H-paniculata_contig2188:17817..178791691480929.2850523-CDS-H-paniculata_contig2188:17817..17879Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2188 17818..17879 +
1622929596.9641216-CDS-H-paniculata_contig2188:19682..198651622929596.9641216-CDS-H-paniculata_contig2188:19682..19865Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2188 19683..19865 +
1691480929.293236-CDS-H-paniculata_contig2188:19682..198651691480929.293236-CDS-H-paniculata_contig2188:19682..19865Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2188 19683..19865 +
1622929596.9777775-CDS-H-paniculata_contig2188:20460..205561622929596.9777775-CDS-H-paniculata_contig2188:20460..20556Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2188 20461..20556 +
1691480929.3015075-CDS-H-paniculata_contig2188:20460..205561691480929.3015075-CDS-H-paniculata_contig2188:20460..20556Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2188 20461..20556 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2188.5778.1prot_H-paniculata_contig2188.5778.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2188 10351..20556 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2188.5778.1

>prot_H-paniculata_contig2188.5778.1 ID=prot_H-paniculata_contig2188.5778.1|Name=mRNA_H-paniculata_contig2188.5778.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=190bp
MEDRRDVFRHQFLTARETGEKRIQEEGQKTQRHIAQSDRHPSSSSNTSSS
LIMWWSQTNPRKRLGLEAFKMAVYLGLPVGAVAIYSNPSVMQSVLNHYKF
IEYPPEGPKPPTNKEIWAMINAKDKERAEQAAAEAAGAVARSTAALPALA
VTASEELNAEQFPVGGRTQGQNEDCASKKGGWFGWLRRG*
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mRNA from alignment at H-paniculata_contig2188:10337..22339+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2188.5778.1 ID=mRNA_H-paniculata_contig2188.5778.1|Name=mRNA_H-paniculata_contig2188.5778.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=12003bp|location=Sequence derived from alignment at H-paniculata_contig2188:10337..22339+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATTATGAAAAACATATGGAGGATCGGCGAGATGTGTTTCGACATCAATTT
CTGACAGCACGAGAGACAGGAGAGAAACGGATACAGGAAGAGGGCCAGAA
GACTCAAAGGTCAGTGGCCTTATATATTTTCGGTGGTGTTATATTTCATC
TTTCTGTGGGAAAACCGTGGTCTGAGCTGTACGATTTTGTCGCGGCTAAC
GTACATGCAACAAACCTGTCATTGGGTATCAGGTAACGGTATGAAGACGG
AGAACAATCTCTGCCCGCACCTGACACGACAGAGATACTACGGTCAGCTG
TGGTCTGGGCTGTGATAACAGTACTGTAGCGAAGCGTCCGGGTGACTTCC
ATTATACCCAGTTTGGGTCTACTGCAGGGGTCGGTTTGTTGTAGAGCCAT
TGCGTTTCACAGAGCAGCGCCTTGATGCCTCGACACAATACCAGTGAGTC
TCTCTAGCTCTATTTGGTCTCGACTCTGTGTCTCATAAGCATGTTGAAAG
TGCATGCAGTATGCTTCGTGCAGGTACACACTATGATACTGTCTGTATCC
ACTCAACATGTATTGACCGGTCTTGAAGGTTTGTCAGGGGAGTTTTAAAC
ACCCAATCATAAATCGGGGGTCAGCAGGGTCTGTAATACCGGGGAGGTAG
GGAAGCGCACAGGTTCTGGTACCGAAAGATCGAGAAGGTGTTTAGATACC
TCTAACAAGAACCCCCGGTGAATTTCGTCTAAACCAGTGTACAAACGGCC
ATTGTGGATGGTATGTAAAAAGAAGAAAAATATACGCCGATTTGTACAAA
CATCAAAAGTCATATTTCAAAGCCTTGGCCGATAATCGCAGATATCTCGT
GCTACACCTGCGGTCACGCAACGCGACTTGCCACACAAAGAGTGACCAGG
CTTATGATCCATATTCACTCAAGGTTGTTGGCCTGAACATAGGATGTTAA
GCAATTTGAGAGGATATGGTGTTATGTTTTAGGTCGAGTCATCATGCTTT
GTCACAGCCTAAGGAGGTTGCCTGTGACAGCGCGCACGACATGAGCACAC
GATCTGACCACACGGAATCTGCGCGCGAAAGGCGAGAATTGCGCTCACTG
GCGTTCCTGGGAAACCACTATTGTCATGTACCATAATCGCATCTGAGGGC
AATTACACTGACAAGTAAAGTCGACATTGCCAGGCGCGGGGGGGGGGGGC
ATGTGGACTGCGCATTTGGTCTATCGTGAACCAAAAAGTCGGTACCATCA
ACACTTCGGATTTGGGAGAACACTGTCCATCAACAGCGACCCCAATGTGG
AACAGTACATTATAAGGTACCTGATCATCATCGATATATTCTTCACTATA
TCGATACATCAAATCATCCGCGCAATATAGGACGATTTGAGGAATTTTCA
ACCTCTTGCGACGCTGACAAGTTAGCATCAACTGGAATAAGGTTCGCATA
CTACACGGGTGAGGCCAAAGGGGAGCTGACAGTGTGGAGCCAGTGCCTGT
TGCATGCCGGAAGCGTCGGCACCAGCAGAAAGCGATGCAGACACACCATA
ACATAAACACAACAAACACAGCAACGAACACCACAGCAGTGACCCTTAAC
TACGACGCTTTCACCATCGTAAACGGGAGACTAGCTCCGAGCGGCAGGAT
ATTCTCTCACCATCTTTCCCTCGAGATGTCTAGCGACTCTACAGACCCTC
GCACAACCTTGATCAATTCCTGCTTGTACATCGTGTTGTTGCGCGTGTTC
GGCGTCGAGGCGGAGTGCCTACCTTGGTGTTTTGTAGCTTTCCCCATACC
AGTCGGAGGCGCGAACGTGGCCACCTTTGGTTTGTTCCATCCCTTTTAGT
TCAGTCAAGCAAAACGTAGCAGGTGATGTTGTGGGCCAGCTTCTGGTCAG
ACAACTTGGAACAGAACAAAATGTTCTCTTCTCCCTGCCCGCGTTTCACT
CTTTTGTCCAGTATCGTCAGTTTCCCCTGCCCATTGGGCGTGAAAGCGGG
AACGCCTTCCAATGTCTTCAGTACCTTTTTCACACGAGGTCACCTTTTCC
GCACGAATTCTGTCATGCTGTTTCTTTCCCTGTCGTCCCCGAGAAGAAAC
TCGCGCCGCACATCTTCTGGTGCCGACGTTAGCCTCGGCAAATTCACTCA
TGTCTGCGGATTGATTTCCCGCTTCAGAGTTGTAGCCCCAGATGCAGCGT
CAGCCTCGTGCACGGAGCAGTCCTTGCCGGGTGCCGCCGACAGTCTCGTC
GGCAGTCTCGTGTGCCCCGCTGGTTACTGACAGGAACCTCCGTCGTCTTT
CGCACGTGCGTAGCCTGCAGATTTTCCGCCATTGGCGTACAGGTAGCCCC
AGCCGTGAAAGGATCATTGCCTGTTGCCGCCCACAATGTCGGCGATCTTC
TCGCTGCACCAGGCCTGTTGCCAACATAGATGTCGGCAGGCGGTGGCAGG
CGCGGGGACTCTTCTCCTTCGGAATCCCCCGCGACAGACGTACCAGAACT
GCCAGGCTTTAAACCCTCACTGCCCGATACCGCCGCCAGTCTCGATGACT
TCCTCTCTGCGTTACACACCCTCACCCACGTGGGGCCCAGGATTCTTTAT
GCTTCCAGGCGCTATCGTTCCTGCGACAGGTCGTTCTAAACACGAAACAT
AGCAAATGGTGCAAGAAGGCAGGGGCCGAAAGGGTTCGTCGTGAGAAGTT
GTGCATCGCGGAGTTCATTTAACGTGCGCACCTCTGCTCGGGTGAAGGAA
ATCAGAGGAAAGGTGAATAGCCTCGGAGGCTCAACGCGTCTCTATGCTAG
CCCTTTTCTGATTGCTGTATGTTTAACCGTTACATTATCTATTATCGTCG
GGGTATGCAAGGTTCTCATGCCTCGCACGTTTTACACAGTTGCATCATTT
GAAACTGACGTCGTCATTTTTGTAATGTTGATATCATGTCTCACTGCACG
ATCATGGTAGCACCGATATTTGACGCTGTCAGTGTTGGCGTTGCATGCAA
TATCCGTTTTATTGTAGTAACCGCTACATGGGACATTTGTTCTCACCTGT
GATATAACGTCCAGTTCGTAGCGACCGCTGCCGCCATGCGCGTAGTCGTA
GTTGGTCGGGATTATAGTCTGATCGGATTAACAATGTGTAGCTATTGCTG
GCGGTGAATATCGGCACCGAAAAAAAGCGATATGTTCAAACTCTACCGTT
CGGGAGGGTATTCGAGCCAGGGAGAAAAAAGGTCATCCAGCTTGAAATTT
CCCGCCCGTCGTCGCTACGTCAAACAATTCTACACGCCCGTTATGTTTCG
CATCTTGTTGATGTAGTAATACTGACGCCCTGCGTTCTACGCCCTGCGTT
CTACGCCAAGATATTCCAAGATCTGCATGTGTAAGATCGGCAGATGATGT
GCAGGACAGTTCTTTTACAAAATCAACTAAAATGGAATCCTTGATTTTTC
TCGTTGTGACAAAAAATCCGTGAAGCCTTTTGCAATAGAAAGCTCATAAT
GAACAGGTCACGTGGTCTTCTTGGGGTCCGCTTTTATATTCCTGGCGCGA
GCGTAGCAGTCTCTCGATAGCGTACTCCTTTTTTACAGAGGGGGGCAGTG
TGCAGCTAACCTTCGACATGTACGGCAATACATGTTTCACACCAACTCAC
TCTGCGTCTAACCTTCATGGACACTGGAACCTCAATCTGGAGAACAAACC
TCATCCGTCCTCGCATTACATTTCGTTCCTTGGGCGATGCCTTCTGGCCC
GCTGATGCATATACTCAGCTCCGCGGACCGTGCCCCAAATGTAGAATATT
CGTGATCATCCAGCATACGTGAGTCCGTTTTCAAAAGGGCGTCCATTGGC
GCAATAAAAAAAAATCGACCCAGGCGGAACACTGAGCAATCAACTACAGC
AATTGGGAATTGTCTATCTTCATCAAACTGGGACGCAACAGTCGCTCTGT
CCTGTACACCGAAGCGCTCTCTCTTAGCGTCTCGCCGTCGCCACCTGTAA
TGCCAAGTGTGAAGCAAATCACATACTATGTAGGACATGATATACTTTAC
TGTCTCAAGGACAGCATGTGTAAAGTACTAAGTAGAATAACCAGTTGATA
TTGCATGTGCAGCGGTTCAGCTCCAGCACAACGGGCTGCGACCCAAGGCC
TTAAGTAGACTCGAGCCAGTCGTCTAACTGCTCGCCAATACCTGAAGGAC
TTGAGCCAAGAAGCGACTGACAACTCGTTATTCCAACAAAATGTAGCTGT
GGTTGTTGCTCACTGACAGGTGCTCGCTACTCTGTGTCGAGTCTACCGAC
TAGTTATTCAACTTGGTAAATGGATAGCAATACTCAATACAAACGAGGTG
ACGGCAACCCCTTCGATTCATGCACCCAACATATTTTCCGATCGAGCAAC
ACATACAGGGCCTCCCCTCCACACTGCAGTAGTGTATATACTACAGCATA
CTGTAGCAGGGTACATTTCTTGCCTAGCTTCGGGTGCCGCTGTCCGCAGA
CAAAGCACTACTTATTACCAACTCAAAAACCAGGAACACGAGGCCCATTG
TAACACCGTAACTTCTCTTGATATCCTAGGGCCGAAGCTCACTGAGCAGG
GCGGTGCGTGTACTGCGCCAAGTTGAAGGGAACAACATAGGGGGGTTTAG
TGGGTGCGAGTCCCACACTACCCTGAGCAAAGGGCGGGCGAACGCTTAGG
GTGCCTTCCCCGCAGGACAGCCGTCAGGTTGTCTAGTTGGACCTTCGGGC
AACCGACACACGAACCCGAGTATCGGGGTAAGTGTTGGGCAAAGGTTTCC
TCCTCTCCTTTCGAGGAAAAAAAAACAAAAAAACTCTTGATGTCGCACCC
CCTGATACATTTTTTCAAAACTTGATTCTCCCGACAATGACGGTGCTCAT
GACACGGATAGCGGTATGGTTGGGAAGATTTCGTTGAGATCTTGCGGTGG
AAACGTTGTTTCGGCAGTGCAGACTCTTGCTTCTCGAGAAACCGGGTTTG
GAAAATAATACCATGGTGTTGCGGTACATGATCATGGGGTAGGGAGCCGC
GGCTCTTCCGACATACAGTCCAAGTTCAGTACAGGCAGGAAGTACGGACA
TCGTAGACAAAAGAGTTGATGTGGTTCCGGGCCCATCGACTACACCGGTC
GAGATTTAGTGTCAGCTTCATGATTTTATCCAGAAAAGCCTCCGGCGCTC
AGGAACCAGGGGGGGTTATGTAACCCTTGAGAAATCAGATTTCGTAACGT
CCGTACTATGGTTTCGCTGACGACCAGTCATAATTAATGATGAATATGTC
GACAGAACGCTTTACTAGCCCAAAGCAGCTGCTTTGTGCATCTCAGATGC
AAAAGGGGGTGTTGTGTTCTTGCCCTTCACCGGGCTTTTATCGTGGATCT
ATTGTCGAGCGTTGACCGCCATCGGCTTTTATTGTAACAGCCAAATAGTA
CGCCAAGCACTTGACCGCTGATTAAGGGGGTCAGACATTCTTGAAGGGTT
GGCCCATGTCGAAAAACACTCAGACCGTAGTCTTCATTTTGGAACATGAG
AATACAGGTGCAGTACTTACATACACGTGCCCCACTTTTCTGCTGCTGCC
GGAACAGTAGGTGTTGAGTTGAGGTTTAAAAGAAAGTCGAATGGTGTCAC
TTGTTTCGCCGGTGGAGGCCTTACTATCTTCTTGGATTCAGCGGAAAGCC
AAAACGGGAAAACGTCCAGCTGGTTTCTCAACGATCAAGTTCTAAATAAA
CCCTACATCGCTGCTAGGTCCTTCACAGGCGCCGAAAGGATCAACGAAGA
ATACTGACATCTCTCCCCCCCCCTCCCGTCCACCGACAGACACATCGCCC
AATCCGACCGCCATCCGTCATCGAGCTCTAATACATCGTCGTCTTTAATC
ATGTGGTGGAGCCAAACGAACCCTCGCAAAAGGCTCGGATTGGAGGCGTT
CAAGATGGCGGTGTACTTGGGTCGTAAGTTCCATATACATGTATTTTAGG
GTGCTTGTTGTGTGACCTGGCCACGAGGATTCGGTTTTACGATACGCCAC
ATTCAGCGTAACGCGGGCTGTTTGGTGTTCGTTTTTATCCCGCGAATAGT
AGAAGTTTTGTATGTAATCCAAAGCGTAGAAAAGACGAACAAACAGTGAA
GGTCTGGCTTCTTGGGATTATTCTATTCAGCAGAAGTTTATATATTGGTG
ATGCACGCTCCGACTCCAGGAAAGAAACACACCATTTTTTTTGTGCGAGT
TTGTCAGGCGGTTTATCGCATGTTCACCAAATTTTGCGCACTTGTCTCCC
TGAATGACTAGCACCGAGCTGCAGGTTTCGTACCCCAGTCCACCTGTACC
AATGTCGCGCTACGAAACGAATCCTCTTTTTCGGAAGTCGTAGTTCCGCG
AGTTTTACGAATTACGAAGGGTTGAGAAAATGAGCCCGTCTTTGGAGTAA
GACGTTAATACAGGTGGAATCGGGTCCGGGATCTGCAGCTCCACTGTGTA
CCACGCGCAGGACCAAATCGAAATTTACGTTAAAAACATATGCTGGCGTG
AACACTCTAAATCTTCGTTTTTTATTGGATTAAAGCTGTCACCTTCAACA
AAAACCCGATGGTAATCGACAAATGGCATCGCCCCGACGTCTACCAACAG
TTTAGGGGTGGCCCGGGCGGATTTGTGTTGTCGAGACAGAATGCGGAGTC
TCTGTTTGGGCGTTATATGTGGAGCCACTCCTCAGAAGTGTCGACATAAA
TGATCTTGACTGCATCAACTTCGCTATTAATACATTTAGTTGCCTCGTAA
TTTCAATCTGTGCGTCGAGCCAATTGCTGACCACTTTCGTGAACAATCGG
TCTCAAATCTAAAGATAATGGTGTGAATATAGCGAAAGAGGGGGTACCCA
TGTGCCGAAGGGGGGGTTGGAGAGGGGGTGCCAACATGTTTCGAAAGCTC
CTACAGTATTTCGGCAGCTACGGCACTAGCGACGATGGGTGCTGTGTGTC
GTTGGAATATCTTGCGGATATCTATCGATTGGCTGGCTCTCTACCACGTG
AGGTCATTCTCCGTTCTCGAGATTGCCACATTTTTAGAAAAACGTTGTTC
GCATTCGCGACCCCACTGCAACATAGCAGAGCGTAACCCGGTACTCGTTG
ATCCCCTCGAGATGCGATAATTTTGGAAACATCGTTGATTTACATAACCC
GGTTTGTGTTTGAAAATCAAGATTTTTTTCTAATGTCCCGAAGAAGTGTC
TCAAAGTAGAGCTGGGTGCTCAAAACCAATCTGTGACCAGTTGCGTCCGG
AGGTCTGGTATAACCTATTATTTTGTATATGGGAAAACAAAAAAAACTGT
CCCAAAAGCAGATCTCATGGGGCTTCGTTCCAAGAGGGCTGGTCTTTTCA
TCGATCAGCGTTCCTCTCTCACTTCATTCACCTCACGCTTGCGTTCCTGT
TTTCTTTCAATCTTTCGTTTGTCTCCGGCAGTTCCGGTGGGAGCAGTGGC
CATATACAGCAATCCTTCCGTCATGCAGAGTGTGCTCAACCATGTGAGAG
TCATCTTTGTGGCGCAGTAAAATACGACGACGATCGCGGTGTGTGCTTGT
TCATCCAACTGAAAAATCGTAAACATATCCCAGTCCCATCCCCCAACTGT
GTAGAGTGTGTGGTTATTTATGCAGAGTGATAAAAGTCATGTAGTATATG
CAAGAATATATGGGGGCTTATTTTGTTCACACAGTGCTTCGTGAGCTGCG
CAAGTTCGTCATTCTAGTGTGCTCGACTGAAGCAGGCAGCAGCTAGGGTC
AAACAAACATAGTGCAAAGGTCATGTAAAGCGCGTCACAGCCAGGAATGG
CCATATCACGTCGGCCGCTCCACACCTCGTCTGCGTTGTGAAGTAAAGTG
GCACCGGGCCAGGCTAGTTAGTACCATGGGCCATCGCGTGTGGAAACCCT
GATGTCGCCCCATTTTTGCTTCCTCCGTTATGCTTTTCGTCAATATTTTC
TACCACCCCCTTCAGCTTCTTTGATTGGTGCACCATTATGTATCAGTATA
ATACGGCTGCGAATATCTGATAGTAGATTTTTCACGCTGCTGTGGAGAGT
AGATGAGTCGTTCTCACATTCTTTTTTTAGTCAACCTTCGGGCGGGGGGG
TAGGATTACTCGTGTTTTGCATGCCAGAGGGGGGCGGGGGGGTGATAAGC
ATGCGGGCGAGATACTCTGCCTGCTGAAGGGAGAAGAGTTCTCGTCAGAG
TCATGCTGCCATCGAGATTCCATTTCACTCAACTTCGGAAAGTCATCACG
CACAAGTGTTCTCACAACTTACTCACCTGTTGTATGTGAAGTCATCGTGC
CAGCAGCATTCGCTCCAGCAATAGAAACATACGTATGATGAAAGAAGATG
GTGGGGACGTACGTGTAATTTCCATTTGATTTTTCAACTTTCATGATGCT
CCGTTCAAGTAATTTGCTGTGCAATGACCCCGCTCTCCCCACGTGCCTAT
ATATTCGTTGCTCTGGTCGAATTATGCATGCACGCCTCCTAGCCCCCCGT
TCTTCACTTTTTTTTTAGCCGTAAGCGGTTGGAGTTATGCATGTGTACCA
GGAACCAAAACAGGCCTTTGGCTGGTTCGGTGCTGCGCTGCACGCCGAGC
TCCCCCTCCCTCCCTCCCTCCCGGGAAGGACCCCGAAGACCACACGTTTT
GGATAGTATACATAGTCAGTTTACTCGTTTTTTTATTGAAATCGGAGTTA
CTGAGGCTCTTCGAAAGTCTAGATTTTATGCAGCCTTCGGATCCGCGTGG
ATCACACCCACATGAGTGAAGCACGTGGCTCGTTAGGGGGCTAGACTGTT
GTTCCAAACATTGATACTCCTTCCTCTCCGCCCCGCCATGCCCGTCCAGC
TTTTCTTGAAACGTCCTGGTGTTCGAAGTAAAACCTCTAGCACAGTACAC
ACGAAGCTACAATCAGTGTTTCTATACTATTCTAGGATAGGTTAACTTAA
CGACGAACGTCCATTTTGCTTCCGGTGTCATTTTTGCGTCCCTTTCCTCT
ATTCCCCATAAATTTCTTGGTGTTCTGGGTGATTGGTTGGATTTAATGCG
GTTCCATCCCATCCGATCAAACCCAATCCAATCAGATCCCCTCTCATTCA
ATCCGATCCAACCCGACTCGTTTCGATCCGTCGCTGTTGTGATGTTGGAT
TGGAACAAAACGACGACCCGACCATGTTGGGCGAAAACACCCCGTTCCGG
ACCGAACCCGGACCTGGACCGAACCCGGACCCGGACGGACCCCGAACCGA
TACCGACACTGACACGACACCGAAACCAACACCGAAACCGATTCAGTACA
AGTTCATTGAGTACCCACCCGAAGGTCCCAAGCCCCCCACGAACAAGGAG
ATATGGGCAATGATAAACGCGAAGGATAAGGAACGGGCTGAGCAAGCAGC
GGCTGAAGCGGCAGGTGCAGTTGCCAGGAGTACTGCGGCGCTACCAGCTC
TTGCGGTGACAGCATCAGAGGAGTTGAACGTGCGTATTTTTTCTTTTAGT
AGCAAAGCCGCGGCCATTATTGTATGTACCGTGTTGTCCAAGCTTTGTCT
TGGCCTCGCCTACAAGGCGGCGCTTGCAGTGGCTTGTCATGTCCACAATC
AGGCACGGTATGCACGAAGATTTGTTTTTCGAAATTTGCTTGAGGATGGA
GTGTAGAATCTAATATCGAAACTCGAACAACAATAATGATGACCTGACCG
TATGTAGAAAAAAAAAAAATGAAAGAAATGGCACTTTTCAATGAGTCCCG
TTAGATCATTTTTCACTTTTTTGTAAATACCGCTTTCGTTTGACCGAGAT
CGAGTCGTTTTCTTATACTTCGTGACCACGTGTCCATAGTCGGGTGACTG
CTTCGCTGACCGTTCCTATCGCCTCACCTCACTTCTGGATGTTTATACCT
GCAAGGAGTGAGGTACTGTCTAATTACCTTGTTATTGTTATTATCTATGG
CTTTGATGAATTAAGTTTTTTTTTTAATTAGTACTTGATGCACATATGTG
GGAGTCATAAAAAAATGCTCCTTTCCTCCAGAAGCAGGTCGTAAAGTAGG
ACTAACGTAATTTTTTCCCCTCAGGCGGAGCAGTTTCCCGTAGGAGGGCG
GACACAGGGCCAGAATGAAGACTGTGCATCGAAAAAGGGCGGTTGGTTTG
GGTGGTTGAGGAGAGGCTAATGTGATTGGACGTGAAACAAAATTATGCCG
AGAATAAGACGGCCCGCAACTCGGCTTTCTCCTGTGCTTGGGTGAAAGTT
GGGTGCTGTCGACCCCTACGCTTCCCGAATCCGCGTAGTGTTCAGTAGGG
AAGTGGCGGGAAACTTCGGATGCATTTGGAGGGCCTACGGTACGCTATCC
GCTTTTGTTGCCGGATTTTTGGCGTCTAGCTAGGTCTTGAAGGGAAACGC
ACCTGGCTGTTGAGCATAGTAGGGTGCTATTAGTTGGTGGATTCATTTTC
TTTCACATATTTTATTATTTCAAACGATCGTCCCGTTTTGAAAATCATTG
CCACACGAGTATGGCTGCGTTTTTGTGTCAGCTGTCCTTGTTGCTCGGGT
ACATGAACGGGATCACATGCCTGTCTCGGTATCTGCAGTGCACACCAATT
TGGCACCGCTGGCTAGTGAATACTTCTGCGGTGAGCCCGCGTCGGCGTGG
GCACCTACCCCCATTTGACGCGGTGGGTATCCCTCTATTTCGGGCGGCCA
GAGGAAGAAAGTGGAACTATACGTAGTGGCGGATGATTTTGACCCGTAAG
TAACTCATTGACGCTCCCCATGAAATTCCTGTGCTTATTAATGGTGTGCG
CCAATCAAATGCTTCGCAACATCGGTACATGTTCGGGATATTCGCTGCTG
GGAAGGAGAAGAATCATATTTATTGGATTAAAAAAACAAAAAAACGTATG
GTGGTTGACGTGGATCGACCCTATACAAATGATGTGGATTGTTTGGGTTT
GGATCGGTTGTATACCTACAAAATGTTGGTTCGGTTTGTGTGTTTTAATT
TTGCTGAGAGGCCGGACGACAAATGCCCCCCGTATTGCTTGAGGACAAGT
GAGCTAATTATTATGGAATAGTCGGCTGTCCCTTGTGGTTTAGTTGGAAC
GACCCCCCATGTTAACACCCCCGTCTTTGCCTTATGTCACGCGATGTCGT
CGCTGTGTGTGGCGTGACGTCGTTTATGCGTGGGTGTGAGGATCGAAGGT
CCGTCTTGTACTTGGGATACAGCCACGCTTGTGGAGCCTGCAACATTTGA
TTACTCGGGATGAAACCCGGCATCCAGACATTTTCATTAGTGTACCCCTC
CCTCCCGCCCTCGCCCCCCTAGAACAGCAACCGAGCTGTGTATAACTGCT
TGCCGCTGTGGTGTTCAGTGGGAGGGGTCTACGGTCGACGATAGTTTGTT
GCTGTACGCGGGGGTATTGATGTATATACGTTAAATGTTGCACCACGTAG
TACGCGCATGTGGAGACCAAAGGTTTTTGTTGGTGCAGCTTTTTTCAATG
GCCACGATTTGATTCCCAAGTCAGAGATCTACATGGCACACGGCAATAAT
GTAGCGGTTGCGTAATACACTAGGTGTCACTCAACATCAGTAGTAGGTAG
ATGATCGCGGACAGCAGGTAGTGGAGGAGCTGGTTTGGCGGGGGGAAAGT
TGTGGTTGATCGGAAAAAATTCTTTGATCAAAACAGCCTGCTACAATCTG
CGAGGTAATCGATCATGGTGTTGATATCCATGATGACCCAAGGACGAATC
TTGCCTTAGGTGAGAGAAAGAGGAGTGGACTGTTGTGACTGATGACAGAG
GGTACTGTTCATTGATCAATAAATTTCGGTCAAGAAATGAGCATCGTGGA
GCTCAGAGAGCAAGTACTCCACTTCTACAGCAAACAGCCGATCCTCCTAA
TTGAGGATGAACACGGCATTTTCGCATCATGAAAATTGTCAAAACTATTC
TTG
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Coding sequence (CDS) from alignment at H-paniculata_contig2188:10337..22339+

>mRNA_H-paniculata_contig2188.5778.1 ID=mRNA_H-paniculata_contig2188.5778.1|Name=mRNA_H-paniculata_contig2188.5778.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1140bp|location=Sequence derived from alignment at H-paniculata_contig2188:10337..22339+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAGGATCGGCGAGATGTGTTTCGACATCAATTTCTGACAGCACGAGA
GACAGGAGAGAAACGGATACAGGAAGAGGGCCAGAAGACTCAAAGATGGA
GGATCGGCGAGATGTGTTTCGACATCAATTTCTGACAGCACGAGAGACAG
GAGAGAAACGGATACAGGAAGAGGGCCAGAAGACTCAAAGACACATCGCC
CAATCCGACCGCCATCCGTCATCGAGCTCTAATACATCGTCGTCTTTAAT
CATGTGGTGGAGCCAAACGAACCCTCGCAAAAGGCTCGGATTGGAGGCGT
TCAAGATGGCGGTGTACTTGGGTCACACATCGCCCAATCCGACCGCCATC
CGTCATCGAGCTCTAATACATCGTCGTCTTTAATCATGTGGTGGAGCCAA
ACGAACCCTCGCAAAAGGCTCGGATTGGAGGCGTTCAAGATGGCGGTGTA
CTTGGGTCTTCCGGTGGGAGCAGTGGCCATATACAGCAATCCTTCCGTCA
TGCAGAGTGTGCTCAACCATTTCCGGTGGGAGCAGTGGCCATATACAGCA
ATCCTTCCGTCATGCAGAGTGTGCTCAACCATTACAAGTTCATTGAGTAC
CCACCCGAAGGTCCCAAGCCCCCCACGAACAAGGAGATATGGGCAATGAT
AAACGCGAAGGATAAGGAACGGGCTGAGCAAGCAGCGGCTGAAGCGGCAG
GTGCAGTTGCCAGGAGTACTGCGGCGCTACCAGCTCTTGCGGTGACAGCA
TCAGAGGAGTTGAACTACAAGTTCATTGAGTACCCACCCGAAGGTCCCAA
GCCCCCCACGAACAAGGAGATATGGGCAATGATAAACGCGAAGGATAAGG
AACGGGCTGAGCAAGCAGCGGCTGAAGCGGCAGGTGCAGTTGCCAGGAGT
ACTGCGGCGCTACCAGCTCTTGCGGTGACAGCATCAGAGGAGTTGAACGC
GGAGCAGTTTCCCGTAGGAGGGCGGACACAGGGCCAGAATGAAGACTGTG
CATCGAAAAAGGGCGGTTGGTTTGGGTGGTTGAGGAGAGGCTAAGCGGAG
CAGTTTCCCGTAGGAGGGCGGACACAGGGCCAGAATGAAGACTGTGCATC
GAAAAAGGGCGGTTGGTTTGGGTGGTTGAGGAGAGGCTAA
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