prot_H-paniculata_contig2152.5670.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2152.5670.1
Unique Nameprot_H-paniculata_contig2152.5670.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length74
Homology
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BLAST of mRNA_H-paniculata_contig2152.5670.1 vs. uniprot
Match: A0A6H5KY59_9PHAE (DRBM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY59_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 1.670e-22
Identity = 50/74 (67.57%), Postives = 63/74 (85.14%), Query Frame = 0 
Query:    1 QYVHRYVEEREDHSVLSKSCTVKGRRRLSVMRRAMMEGLAYLSGGNVIVVDIPVPPTLPSEVPDLGLLTRPPPE 74
            +YVHR VEE  + +VLSKS TV+GRRRLSVMR+AMMEG+A++SG +VIVVD+P PPT P++V DL  +TRPPPE
Sbjct:  492 KYVHRMVEELNNPAVLSKSATVRGRRRLSVMRKAMMEGMAFMSGDSVIVVDLPPPPTSPADVGDLASITRPPPE 565
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2152.5670.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KY59_9PHAE1.670e-2267.57DRBM domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2152contigH-paniculata_contig2152:676..1595 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2152.5670.1mRNA_H-paniculata_contig2152.5670.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2152 676..1595 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2152.5670.1 ID=prot_H-paniculata_contig2152.5670.1|Name=mRNA_H-paniculata_contig2152.5670.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=74bp
QYVHRYVEEREDHSVLSKSCTVKGRRRLSVMRRAMMEGLAYLSGGNVIVV
DIPVPPTLPSEVPDLGLLTRPPPE
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