prot_H-paniculata_contig2145.5646.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2145.5646.1
Unique Nameprot_H-paniculata_contig2145.5646.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length381
Homology
BLAST of mRNA_H-paniculata_contig2145.5646.1 vs. uniprot
Match: D7FHI0_ECTSI (LisH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHI0_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 6.040e-36
Identity = 134/388 (34.54%), Postives = 182/388 (46.91%), Query Frame = 0
Query:   14 SGLRGGAPSLGRHVDNVRDREQLYVTEFEILLSAAKNRILPPDV-----------PLHFFLTPVVTRLAEIAEILEHAYTRQPGVNAFDNRRDSHAIGQVIRLATLDVNEHNTRYSHSNVSPLISNVLFSLLRSGXXXXXX-VSAAALCRFLTSVAMAPSENASRSSLPQPVQTLLLEDMDLLGVVLSWATGEVPSVDGDFSEAESRRNSEAAESARRMIRQTHLRTA-------------------------------------------GASVTPPPPHPLLPSGPPSSTAP--TNPAAPPPSXXXXXXXXXXXXXXXXXXXRLQATAGNRPSTEASLRAHATGLVSAVLVASRQATDLVVNKGFGSDLMQRLREGPVAEHLRFEA 344
            SG  GG       +   R R Q    EF  LL+ A      P             P HF+L PV+ RLA+IAE LE +Y RQPGVN F+NRR  + IGQ IRLAT+   + + RYS    +  +++VLF LLRSG       +  AA+CRFL +V+MA  +  SR++ P P+ +LL E++++   VLSWA G  P         ++     A E  R ++R +++R A                                           G  V+         +G  S  AP  T PA  P +                          +R S EA LRAHATGL++A L+ SR+ +DL+VNKGF + L+QRLREGPVA+HLR EA
Sbjct:    9 SGSGGGGNVFRGPISAERVRLQALAKEFASLLAEAVKSASTPTAGEGAQGNSIPEPKHFWLVPVLHRLADIAERLEASYCRQPGVNVFENRRYMYPIGQAIRLATMGTVDDD-RYSQP--TRFVTSVLFGLLRSGGGVGGGAIVLAAVCRFLCAVSMATVDQGSRTAPPPPIPSLLSEEIEIYEQVLSWARGGAPXXXXXXXXXDAAAAQAAMEKGRELVR-SNMRAANPEEGSKSGGGDKGKGKAKVPRTAAXXXXXXXXXXXXXXXXXXGTEVSE-----AEGAGAGSDVAPGTTAPAESPEATVAAAATMPPTAAE---------VLADRASAEAELRAHATGLLAAGLL-SRELSDLIVNKGFAAHLVQRLREGPVADHLRAEA 377          
BLAST of mRNA_H-paniculata_contig2145.5646.1 vs. uniprot
Match: A0A6H5JDL7_9PHAE (LisH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL7_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 7.450e-29
Identity = 127/413 (30.75%), Postives = 171/413 (41.40%), Query Frame = 0
Query:   31 RDREQLYVTEFEILLSAAKNRILPPDV-----------PLHFFLTPVVTRLAEIAEILE--------------------HAYTRQPGVNAFDNRRDSHAIGQVIRLATLDVNEHNTRYSHSNVSPLISNVLFSLLRSGXXXXXX-VSAAALCRFLTSVAMAPSENASRSSLPQPVQTLLLEDMDLLGVVLSWATGEVPSVDGDFSEAESRRNSEAAESARRMIRQT------------------------------------------------------HLRTAGASVTPPPPHPLLPSGPPSSTAPTNPAAPPPSXXXXXXXXXXXXXXXXXXXRLQATAGNRPSTEASLRAHATGLVSAVLVASRQATDLVVNKGFGSDLMQRLREGPVAEHLRFEAESAARAEGGEADG 357
            R R Q    EF  LL+ A      P             P HF+L P++ RLA+IAE LE                     +Y RQPGVN F+NRR  + IGQ IR AT+   + + RYS    +  +++VLF LLRSG       +  AA+CRFL +V+MA  +  SR++ P PV  LL E++++   VLSWA G            ++     A E  R ++R                                                            AGA  T        P+  P +T       PP +                          +R S EA LRAHATGL++A L+ SR+ +DL+VNKGF + L+QRLREGPVA+HLR EA      +    DG
Sbjct:   29 RVRLQTLAEEFASLLAEAVKSASTPTAGEAAQGNSIPEPKHFWLVPILHRLADIAERLELPRHVQYKTQQARLPPVAPQASYCRQPGVNVFENRRYLYPIGQAIRQATMGTLDDD-RYSQP--TRFVTSVLFGLLRSGGGVGGGAIVLAAVCRFLCAVSMATVDQGSRTAPPPPVPALLSEEVEIYEQVLSWARGGAXXXXXXXXXFDAAAAQAAIEKGRELVRLNMRAANPEEGSKSGAGDKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGAGTT-------APAESPQATVAAAATMPPTAAEIL---------------------ADRASAEAELRAHATGLLAAGLL-SRELSDLIVNKGFAAHLVQRLREGPVADHLRAEAAKENHRKASSGDG 409          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2145.5646.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHI0_ECTSI6.040e-3634.54LisH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JDL7_9PHAE7.450e-2930.75LisH domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2145contigH-paniculata_contig2145:7270..16579 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2145.5646.1mRNA_H-paniculata_contig2145.5646.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2145 6937..16579 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2145.5646.1 ID=prot_H-paniculata_contig2145.5646.1|Name=mRNA_H-paniculata_contig2145.5646.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=381bp
MERRRPRSGSGSGSGLRGGAPSLGRHVDNVRDREQLYVTEFEILLSAAKN
RILPPDVPLHFFLTPVVTRLAEIAEILEHAYTRQPGVNAFDNRRDSHAIG
QVIRLATLDVNEHNTRYSHSNVSPLISNVLFSLLRSGGGGGGAVSAAALC
RFLTSVAMAPSENASRSSLPQPVQTLLLEDMDLLGVVLSWATGEVPSVDG
DFSEAESRRNSEAAESARRMIRQTHLRTAGASVTPPPPHPLLPSGPPSST
APTNPAAPPPSPSPSPSPPPLPSPPPPPPPRLQATAGNRPSTEASLRAHA
TGLVSAVLVASRQATDLVVNKGFGSDLMQRLREGPVAEHLRFEAESAARA
EGGEADGASAAAAAAAASLEVAVRGGLCDGD
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