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Homology
BLAST of mRNA_H-paniculata_contig2145.5646.1 vs. uniprot
Match: D7FHI0_ECTSI (LisH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHI0_ECTSI) HSP 1 Score: 148 bits (374), Expect = 2.190e-34 Identity = 133/387 (34.37%), Postives = 181/387 (46.77%), Query Frame = 1
Query: 376 GLRGGAPSLGRHVDNVRDREQLYVTEFEILLSAAKNRILPPDV-----------PLHFFLTPVVTRLAEIAEILEHAYTRQPGVNAFDNRRDSHAIGQVIRLATLDVNEHNTRYSHSNVSPLISNVLFSLLRSGXXXXXX-VSAAALCRFLTSVAMAPSENASRSSLPQPVQTLLLEDMDLLGVVLSWATGEVPSVDGDFSEAESRRNSEAAESARRMIRQTHLRTA-------------------------------------------GASVTPPPPHPLLPSGPPSSTAP--TNPAAPPPSXXXXXXXXXXXXXXXXXXXRLQATAGNRPSTEASLRAHATGLVSAVLVASRQATDLVVNKGFGSDLMQRLREGPVAEHLRFEA 1365
G GG + R R Q EF LL+ A P P HF+L PV+ RLA+IAE LE +Y RQPGVN F+NRR + IGQ IRLAT+ + + RYS + +++VLF LLRSG + AA+CRFL +V+MA + SR++ P P+ +LL E++++ VLSWA G P ++ A E R ++R +++R A G V+ +G S AP T PA P + +R S EA LRAHATGL++A L+ SR+ +DL+VNKGF + L+QRLREGPVA+HLR EA
Sbjct: 10 GSGGGGNVFRGPISAERVRLQALAKEFASLLAEAVKSASTPTAGEGAQGNSIPEPKHFWLVPVLHRLADIAERLEASYCRQPGVNVFENRRYMYPIGQAIRLATMGTVDDD-RYSQP--TRFVTSVLFGLLRSGGGVGGGAIVLAAVCRFLCAVSMATVDQGSRTAPPPPIPSLLSEEIEIYEQVLSWARGGAPXXXXXXXXXDAAAAQAAMEKGRELVR-SNMRAANPEEGSKSGGGDKGKGKAKVPRTAAXXXXXXXXXXXXXXXXXXGTEVSE-----AEGAGAGSDVAPGTTAPAESPEATVAAAATMPPTAAE---------VLADRASAEAELRAHATGLLAAGLL-SRELSDLIVNKGFAAHLVQRLREGPVADHLRAEA 377
BLAST of mRNA_H-paniculata_contig2145.5646.1 vs. uniprot
Match: A0A6H5JDL7_9PHAE (LisH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL7_9PHAE) HSP 1 Score: 129 bits (324), Expect = 5.910e-28 Identity = 127/413 (30.75%), Postives = 171/413 (41.40%), Query Frame = 1
Query: 424 RDREQLYVTEFEILLSAAKNRILPPDV-----------PLHFFLTPVVTRLAEIAEILE--------------------HAYTRQPGVNAFDNRRDSHAIGQVIRLATLDVNEHNTRYSHSNVSPLISNVLFSLLRSGXXXXXX-VSAAALCRFLTSVAMAPSENASRSSLPQPVQTLLLEDMDLLGVVLSWATGEVPSVDGDFSEAESRRNSEAAESARRMIRQT------------------------------------------------------HLRTAGASVTPPPPHPLLPSGPPSSTAPTNPAAPPPSXXXXXXXXXXXXXXXXXXXRLQATAGNRPSTEASLRAHATGLVSAVLVASRQATDLVVNKGFGSDLMQRLREGPVAEHLRFEAESAARAEGGEADG 1404
R R Q EF LL+ A P P HF+L P++ RLA+IAE LE +Y RQPGVN F+NRR + IGQ IR AT+ + + RYS + +++VLF LLRSG + AA+CRFL +V+MA + SR++ P PV LL E++++ VLSWA G ++ A E R ++R AGA T P+ P +T PP + +R S EA LRAHATGL++A L+ SR+ +DL+VNKGF + L+QRLREGPVA+HLR EA + DG
Sbjct: 29 RVRLQTLAEEFASLLAEAVKSASTPTAGEAAQGNSIPEPKHFWLVPILHRLADIAERLELPRHVQYKTQQARLPPVAPQASYCRQPGVNVFENRRYLYPIGQAIRQATMGTLDDD-RYSQP--TRFVTSVLFGLLRSGGGVGGGAIVLAAVCRFLCAVSMATVDQGSRTAPPPPVPALLSEEVEIYEQVLSWARGGAXXXXXXXXXFDAAAAQAAIEKGRELVRLNMRAANPEEGSKSGAGDKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGAGTT-------APAESPQATVAAAATMPPTAAEIL---------------------ADRASAEAELRAHATGLLAAGLL-SRELSDLIVNKGFAAHLVQRLREGPVADHLRAEAAKENHRKASSGDG 409
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 156.0 |
| Seed ortholog evalue | 3.5e-35 |
| Seed eggNOG ortholog | 2880.D7FHI0 |
| Preferred name | VPRBP |
| KEGG ko | ko:K10744,ko:K11789 |
| KEGG Pathway | ko03030,map03030 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000122,GO:0000151,GO:0001650,GO:0001775,GO:0002200,GO:0002376,GO:0002520,GO:0002521,GO:0002562,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0006139,GO:0006259,GO:0006310,GO:0006325,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007275,GO:0008134,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016301,GO:0016310,GO:0016444,GO:0016569,GO:0016570,GO:0016572,GO:0016740,GO:0016772,GO:0016773,GO:0018107,GO:0018193,GO:0018210,GO:0019219,GO:0019222,GO:0019538,GO:0030097,GO:0030098,GO:0030154,GO:0030183,GO:0030331,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031461,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033151,GO:0034641,GO:0035173,GO:0035184,GO:0035212,GO:0035257,GO:0035258,GO:0035405,GO:0036211,GO:0040008,GO:0042113,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0045321,GO:0045892,GO:0045934,GO:0046483,GO:0046649,GO:0048513,GO:0048519,GO:0048523,GO:0048534,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0051427,GO:0060255,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080008,GO:0080090,GO:0090304,GO:0140096,GO:1901360,GO:1901564,GO:1902494,GO:1902679,GO:1903506,GO:1903507,GO:1990164,GO:1990234,GO:1990244,GO:1990245,GO:2000112,GO:2000113,GO:2001141 |
| EggNOG free text desc. | histone kinase activity (H2A-T120 specific) |
| EggNOG OGs | KOG1832@1,KOG1832@2759 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko03032,ko04121 |
| Exons | 6 |
| Model size | 1478 |
| Cds size | 1143 |
| Stop | 0 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2145.5646.1 >prot_H-paniculata_contig2145.5646.1 ID=prot_H-paniculata_contig2145.5646.1|Name=mRNA_H-paniculata_contig2145.5646.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=381bp
MERRRPRSGSGSGSGLRGGAPSLGRHVDNVRDREQLYVTEFEILLSAAKN
RILPPDVPLHFFLTPVVTRLAEIAEILEHAYTRQPGVNAFDNRRDSHAIG
QVIRLATLDVNEHNTRYSHSNVSPLISNVLFSLLRSGGGGGGAVSAAALC
RFLTSVAMAPSENASRSSLPQPVQTLLLEDMDLLGVVLSWATGEVPSVDG
DFSEAESRRNSEAAESARRMIRQTHLRTAGASVTPPPPHPLLPSGPPSST
APTNPAAPPPSPSPSPSPPPLPSPPPPPPPRLQATAGNRPSTEASLRAHA
TGLVSAVLVASRQATDLVVNKGFGSDLMQRLREGPVAEHLRFEAESAARA
EGGEADGASAAAAAAAASLEVAVRGGLCDGD back to topmRNA from alignment at H-paniculata_contig2145:6937..16579+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2145.5646.1 ID=mRNA_H-paniculata_contig2145.5646.1|Name=mRNA_H-paniculata_contig2145.5646.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9643bp|location=Sequence derived from alignment at H-paniculata_contig2145:6937..16579+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GATTGAAAAACTACTTTTATTCGCATTCTCCAGCTGTGAATATATAGCCG
CGTATAACTTGTATCGCAAATTCCACCGCAGGGTGCAAAGATGCATGTGG
TTAGCTGTCTGCTGCACTATTGATAAACTATATGACACAGTATGCTGTTT
ATTATCTACCGACATTAATAGTTGGGGGTCTTCGATCCTGTTTGACCAAC
GGGAACGACTGTCCGATATATGTCTAATATACAGGGTCGTGGCTCCAAGT
TGCCCAATACCCTTAACAGATCAGGGCTTCAGTACAACGATACAGTACAG
CGGTAGAGCGAGGTGCGTGTGTATCCTGACGCAATGGAGAGAAGGAGGCC
TAGGAGCGGAAGTGGAAGTGGCAGTGGCTTGAGAGGAGGAGCGCCATCGC
TCGGCAGACACGTGAGCCATAGAGTTCGTACCGTACTGACTGTCTGTTGT
CGCGTCTGCCTCCATACGGCCTTGACACAAAGGTTGCCAGTGCCAAAGTT
ATGCTATGTCTCAAGCGCATTCCAGCAAGTGTACAGATTAACCTCGAATA
CAGTGCACGGACTAGCTAGTGCATTGTTGGCACTGCCTGATCGAAATGTG
CTTGTCTCGGGGTGTTCACGCTGCTCACTCGCGTTGTTTGACAGACTAGA
TTTTAGGCCGTATTTTGAAAGGCCTGGAGTTATCTGTATCCTGGGATGAT
ATTATCACTGCGCGGTGAGACCAACACTTCAGTACACTAACAGTGACTGG
AGCTGGTTGGGGAGAGGTGCTTCGGGTGTATGACAGAAGCTTTTTCATTT
ACTGTTGATTTTTTGTGCGTCGAGCACTACAGGTAGACTTAATAATCAGG
GGATTTCCGTCTCACGTTCCAGAGCTCGTATACATCATATATAGTACGGT
ACTACAGATCATGAGCAGTCTCCACAGCCATGAGGGGACTACTATGCACA
GCTTCTAGATCAGATGCATCCGAGGGGGCTAAAGCTAGCAGGAAGGTCAT
GTTACGTACGAAACGTTCAACAACATTAATCGGTTCGACGGTGACCGCTT
GGCTCCCAGCGCCTAAGGCGCAATCAACAGGATAAATCATCGGGGAAAAT
GTTACTTATTGCTGCGGCAAGATCCTTCGAGTGCCGTTCAAAAGAAGCTG
TTTCGGAATCAAAAATATCGACGTTGGCAGCACTGGTTGCGCGCCAACTC
CTTAGTCTGTGCTGATGTGCAGTCTGTAGTGGACTCGCTGTCTGAGCAGC
GGTGGATTTCTATCCCCGCAAATCATATTATAGACGTTGTCGTTGTGGTT
GTCGTCACCGTTGTTGTTATTGTTACTGTCGTCGTCGTCGTACCCCGTCT
CATCACATGGAGCTTATACGGAGGCCGGCGTCAAAATGGCTGATTAACCA
TCGAATCCTAATGATCGTGACACGACACGTCAACCCCTTCGGGGCATAAC
ATCAGCGTGAATCAACCACTGTTGCTATTTCGGCAGAGGGCAAAACGTTC
ACGGATCAACCGATGCTCTTCTCAGATAGGACGAGAGCATCACTCCCTCG
CCTCTATAACAGCCTCCATTGCTCATGATGTTGTCCAGCATATCAGTGCC
TATTTTTGATGGAAAGCATGGTTGAAAGTAGATCCTATGAAACAGGTTTT
CGAGCGTGTGTGTCCCGTAACGGTTAACACTCCGGTGCTATGTACATATT
GTGTGCCGTCTGTGCTGTAACGATTTGCTTGCATACCCACGCAAGAGAGC
AAGCAAAATTGTGCGTGGATTGCGGCGAAATGCAGCAGCAGCAGCAGTCA
GCACGTCTGTGCTTGGTCGCTTGAACCTCCCCCGAAAAACAACGTCCTTC
GTCATCCTCGTCCACTTTCTTTCACGGGTCGCCGGCTACAGTAGTACGTA
CATTCCTGCCCATCAGGATCCCGCGTCTTATTCGGCATTTGTGATGCGGG
AGAAATTCAAGATTTGACCGAATGACCGAACACAAAACCGCGGAAATCAC
TAGTGACTCTATCAACCAGACTTGAAAAAAATTAAAAAATAGACTTGCTC
CGTTGTGCCAAGGTTTATCGGTACGTGTAGATGGAAGAGAGAGGACAGGG
CGGGGATATAATGGCGTCAACAGAAGCAAAACATACCTCGTTGATATTTG
ATGTATTGGGAAGGTGTATGTAGCTTGCTTCTTGTTCATGAATGGAGGTT
GCACACACAACTCAAATAGACGAGCGGAGTCGCGCGGTTCCGCCCGAGCA
ATCCCCGCTTTGTCCTCAACCCACCCACAAACGTTGGAGTAGGAGATTCG
TCTTGTGGGAGTTACTTGAGTAAGGTGTCGAAAAACAATTGAAAAAAAAA
TACCTCACTATAGCTCTAATAAATTACCAAGAACAGAAAAGACTACGTTT
GTATGTATGTACGGGATGTATCCCTCGTTCCCCCCATGTTAAGCTCGTTT
GCTTACATTCCTCCGTCAAATGCTACACAGAAACGAAACACGTCACATGC
ATTTTAAGAACGCGTGTCATCTAACATGGTGTGGTGGTGTGTGATTGGTC
GTCAGGAGTCCTTTTTCTTTTTTCGTGCCTCGTCAAGATACCGCATGAAG
ATATTTTAACAGGCCTGCTCTGTCCTCTTCGCTGCGTTTTCCTCGATTGT
GTGTGGGCTTGTTGGGCGAGCAGGTGGACAACGTCCGGGACCGAGAACAG
CTATACGTGACCGAGTTCGAAATTCTGCTGTCGGCGGCCAAGAATCGGAT
ATTGCCTCCTGATGTGCCTCTGCACTTCTTTCTAACGCCAGTCGTGACCA
GACTAGCGGAGATCGCGGAAATTCTCGAGGTTAGGTAGTTCGTCAGCGTC
TTGGTTGTTATTGTCGTTTTTGTCTCTTATTTTTTATATCTCTTTTTTGT
CACCTTTTCACTTTTTTCCGTCTTCATATATCATGTCTTATATGCATGTA
TTCTGTGCTCTAAGACTACGTATGTTCGCGTCATTTAGACGTGTTCTTAT
GTATGTTGAAACTTAGATGTTCATGCAGGTCTAACCCTCCCCCCCGGCCC
CTCACCCCCCCGGCCCCCCCAAGTCATTGTTCTTGGTAGGCACAAGTCGC
GTGGCAGTATGGCTACTGTAACACGTGTGACGATATAAATGCTGTTACTG
TCTGGTCCCTCGCCTCCGTTCCTGTACTGTATCTGGCTCTTCCTGCGATA
TAGGGAAGGTAGTGTGCCAGGGTCAATTCTAGCGACTCAGAGTGTTTTAG
CAAAAATGATGAAATTGAAAATATTGAAGTTTGTGTAATGGGATGTGAAA
AAAAGTCGAATAAGACCCCAAGGTTTGAAAGTTTTCAAGGGGTTGATTCT
GTTGATAATGACCCAACTTTTTTTTTTCGATTCGGCGTCGTTGAGGATGT
TGAATTATATCTGGGATTTCCGGCTCTTTTCACGTCCCACCCTACATTCC
CGGATTTACAACTTCCATCATTTCCGCCAAAAACAATTTTAGTCGCTAGA
GCTGGTCCTTAGATCCGAAAATTCCTACGCTAGGGGGGAAACTGTCATTT
CTTCCTCTCCTGGGGACAGTGTTGTACTATCCCATATTCAACAATGTATG
GGAGATGAAGCTTTGTCATGTGTTATACCAGAGAACGAGGCCGACGCAAA
CCTATACAGGGGATGCTAGATGAGAATCCCCGAGAATTGTTCTGTAGGAC
GGGCCATGACAAGTGGTAATTTCCCTCGCAATATTTTGGATCTCCCCCTT
ACAGAGTTGAACAGCTCTTTTTGCTCTTCGTTGATCGCGGGTGTGAGAAT
GTTTACATGTATCCTGCTGTAATGTTTTTGATCTCGTCGCGTGTCGCACG
CAGCACGCAATGCTTTTGCAGTCGCGTAATCACCCTTTGAACAAAGTATG
GCGCGTAAAACATGAGAACACCCCCACCCTCCCCCCCCCGCGTCCCGAAT
TTCGCACATCCATTGGAATCCGCACAGCATGCATACACACGCCAGCCTGG
CGTGAACGCGTTTGACAACAGGAGAGATTCCCACGCGATTGGTCAAGTCA
TCCGATTGGCCACCCTGGACGTCAACGAGCACAATACCCGTTACAGCCAC
TCCAATGTGAGATTACACCATTACAATAACAAAATATTGCGGTCACAGCC
GCTACAACAATTGTAGCACTACTGCTGTCAGTTTCCCTAGAGTGCTCTTT
GAGAACGCTTCCTCTGGAAGGGGCGAATGTTTTTTTGAGCTCGAGGTTTA
TCTGTTGCAGTGACTAATGGTCAATGATAGCAAAGCCCGCGTGCGTTTGA
CAAAGCACGTCGATCGACAGATGGATTTGGACGAGATAGTTCTTTCCATG
GACACAGCTTTCCGTGTCAGTAGCACCCTTACTTACGTAGGTTTTGCGAG
AAAATCGCCGTTGAAACGATGATCGATCCGGGTGGGAAGGCTCTCACTCT
AGGGTAAAAGCTCCGCGTCAGCCGCAACCTGTGGAAGTTCGCGGTCAGAG
CTACGCCAACAGTACTTTTGTTTTAGCCATCACAGCCACGCCAATACTCT
TTAGTTAGTTGGAGCCAGTGTGGGTTCGCTTTATTTGTACAGCCAAGTAG
TATCGACCCGTTTGGTGTGAAGCAGCGAAAAAGGCGAGGTGCGCTCGTTT
CCCTCCCTCCGTTGCCGTGTTTTTAATATTTCTCATTCGTGCAAGTGTAC
GTAGGTACAGGTGTGATTTTAGTGAAGCTTGGAAACCTCTGCACGGGTAA
AGATACTGATATATACTGAGAGCCGTTCTAAAGATTTTTTTTTGCCTTCT
CGAACACAAGTATTTTTGTCTACTGCAGTGTTCAGTTACCCTATTTCCAT
TTTTTTCTGGTTCTTTCAACGTGATCTCAAGCGTGTTATCGGGAGGAGGG
GAAAAAAGAGAAGGGCATGTACAAGAGAGCGGGGGGGGGGGGGGGGGGTA
ACGCTCATGTTTCTAACGGCCTTGAAATGTAACTGTACTGATTGTATATT
TCAACAAATGAAAGAGTGAGTTGACTGTCAAACACGCGTTCGTAGGACAC
CAGGGTATTGATGCATTCAGCTGTTTTTCATGTCACGTTGCATGTAGGCA
CAGTAGACACTGGAGTGACATATCTCCGTCCCCTCGCCCGCTCCCCAAAT
AGGAATGTAGTGGCTTCGAGCCATAATTAAAAAAAAGAAAAGGAAAAAGC
TGCTGCGATTTGATTGGTCTGCGGGTGTGTGCGGATGTGAAACGGAACAC
ACCTTTCAATCTGCTTTTTTTGCCTTTTTTTTTTTGTCTTTTTATTATTA
TTATTATTTTTTTTTTTTGCTTTTTTCTTCTTTTCTCGGAAATGTTCTGA
CGTTTTAATGCCTCATACCTCATATGAAGGTTTGATGAAGGTGAATGAAA
TTTGTTGAGAAGTTGGAACATGACCATGACAGTACGAGAATACTTGGTGC
TTTCCAAAACCCGCTCGATAGCTAGCTGAAGGTTTTTCACGCCTCCGTCA
AGTGTTGGATTCTAGAGCATGACCGCACCTCCGCATATTTTTCTATTTTC
GAGCGTCAAAGTTGAATGCAGGCTCTGTGAAGGTGTTTTTACTTGGAAAT
AAAGACGTTTTGTCTCAGCTGTGAAATGTTGCCTCGCGTGTGTGTGCCTT
GAAAACTTTTCATGCGCACTCGCGTATGGCGCCGACGGCACCGACGGTAC
GGAGTTCACCGTCTACCAACGTACACACGATAGCTATCTTGCCTCACAGG
CCAGGGCTAAGGGGCTAGATTTTAGAATTGGAGTTCAGCAGCGGTTCCAC
TCTAAATATATTTGTTTTAGTCGTGGATATGATGAAAACGTAAACATGAA
CCATCATCCAACCAGGGTGGCGCCTAAACCGCAGAGGAATAAATAACTCT
GATCCATTAATAAGGAAATGCAGACACTCAGAAATCTTCCGAAAAGTGGA
AGTAGCGGAAAGGGTTTTTTGCCTGACCTTCCGGGGGTTAAAAAAAAATA
AATGAACCATCATCCAACGGAACCTACTGCAATGTAAAGCGTCAATCATA
TTTTTCTTGTGGGCATATAAATGAACTAGTGGTGCAGCACGCCGCCTCGG
GGGCGCAAATTTGCTTTTTTTTTTTTTTTAATGACTTACCACCGTCGGCC
TTTCGATTTCCCTTCTTGTGCGACGCATCACATATATATATATCTATACT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGTATGCCGTTCCTTACG
GTTGACAGAGCAAGAAATGATATTCGAGGCCTCTTCAGGATCTTCTTTCA
TAGCTAACCAGTTCCGTAGAGCCATGGCTACACACTCCCATGCAATTCGT
GTTTTTCCTCGGCTAGCCGAATTATCATGTCCAATACAATATGCAAACTG
AGTCTGGTCGAGTGAGTCTAGCCGAGCCAACTCACCTTTTGTCCTCTGCC
TCTTTTTTTTTACGGGTTAAGACATGGCGTTATTCTGCAAAGTTTGGCCT
CTAAAACCCAATTGAAAGAGAGAAAGAGGGAGAGAGAGAGAGAGAGGAAG
CATTTGATATTTCGATAAGAAACTCGTCCAAAGCCAGGAACGAGATCGAC
TTCGCTTCTTGATCGCCGCGGACTTCGCTGCTCTTGCAGTAACTTGGGAC
GCTCGGATTAACATTTGTTCAATAGGAGTTACTTGGATTCAGAGTCGGAA
AAGTTGCTCCGAAACAAGTACCGTTATCACCTTAATTACCGTATCACATA
ATGGGGATTGTCGTATTTAATTACTAGTAGTTAATTGTTGAAGAAAAAAA
ATGAAAAAAAATGCTGTTCACCATTAGATTTGCAGTACCTTGCATTGGAG
ATACCTGGTGCCAAATAAAGAAGAAAAAAAAACGATAATTTTTTTTTAAA
CGTACCACCACTAAATAACACGATAATTTTACAGAATTATCACTCACAGT
TGGACGTATTACAGAGATCTATTCAAGTGCATAATGACCTATATATCGTG
AAAGATTTGCGAACATGAAGTTTCAGGGGGCACACGTCCGACGCTCCATG
CGTGAAGAGTCCCTTTAGTTTTTTTTTCTTAAGAAGCACCGCTCAATTTT
TTCAACTCCACCGGCTGCGCCTTCCCTGCTGTCATTGGGCTTATTTTGCT
GATTCGCTGCTTTGGTAGGTGTCTCCGTTGATCTCCAACGTCTTGTTTTC
GCTCTTGCGCAGCGGGGGCGGGGGGGGCGGAGCAGTCTCCGCGGCCGCCT
TGTGCAGGCAAGTCCTCAGCATTCTGTTTTTTTTTTTGCTCTTGGGGATC
TTCACTGTATCGGTCATTAGATAGTGATCTCCATGGTACTGGTAGGAGAA
CGCCTCGTTGAAAGATTGCGATAGTATTATTGCTCGGTTTTACAACAAGG
GCCAGATATCGCGAACCGCAAAATTAGTTAATATTTGCAGATTTGCGGTG
GGTCGTCGTTTCGAATCCTTCATTAGCACTTGGTCTAACACAATAGTTGG
CAGTTATTATTTGTTTTTTTTAAGGTTTCATGCTTCGTGGTGCCCCGACG
CGAGCAGGACCGACGCTAGAACTAACGGTAACCCCAACCCTATCCTTAAC
CCCGTAGGTACAGTTGGCAGAGCTCAAAATCGGCGGCTGGCGGCGCCAAC
TTGAGCAACTACTGCTTTGGGGCACAGCTCAAAACCACCCAGACCAGAAC
GTTCTGATAACTTTCTGGGTGCACTATTATGCCGAGTTAGTGTACCCCAA
CCATCGTGTTCGACTTCGTAGTGAAACACTACTGGGTCTGCACTGAAGCA
ACTCCTGAAGAATGACTGCGTGTGCTGCGAGTCCGTGGGTTTGTGGACAA
GCATGAACAGCACGGGCGTATAGCCGTCGTGTTAATACTATTAGTATATA
TGTTTTTGTATATTGTTCTTTTATTACTGGAATGGAATTATTTTTGGAGA
GGACAGTCGTGTTTTCAGCCATCTGTGTGTGACCTTGCCGTCAGTAAAAT
TTCACAACCAAGTTGGGGGTTGGCGGGATTTTTTTTATTTTTTTTCATGA
TTTATAGATATAGGGAAGTTCAGCTTTCGGAGTGAGCGACAGGGGGCCCA
CCCAAGTTTAGGGCGCGTCGAAAATTAGCCGAAAATAGGATTCTCTTTTT
TTTTTCTTTTTTTTTTTATTCATCCAGTCAACCAAGGCGGGGTACTCGAT
AGGGGTAAATAGAGATGTCATGTTTTTCCACGGATGTGTGCACTTTGACA
TACCCTCGGTACTGTGGATAAAGCTTTGTCTTTTTGTCGCTACTTAGAGT
GGATGCCCGCCCTACTTTAAGGCGGATTATGTGACAAAGCCACAAAGCAC
CCTACCTTTAAAATCGGAATATTGCGGTATTAAAAGGTGAAATGCTCCTT
GTTATACAGGAAATGTACGGATATACATATTTCTCTCTATATATATACAT
ATATATTCTGTGATAAGCGGATTTAATCACCTTAACAATGACTGCCTCGA
ATCGGCATGTGATCGAAAAAGCGTTACAAAAATACAAACTATTTCTTGTA
GTTACACGAAATGTACAGTTTTTTTGTTATTGTTGTTGTGATTGCCCTAA
ACCGAGATATCCAGTATATCTAGTAATCGCGTTAATCCGGGGTATCTATC
TACTGTACATCTAACACGACCTAACTAATGACCGCCGTTGAATCGACATA
TCTATACTTATCCATTGTTCCCATTGCACAACTACAGGTTCCTGACATCC
GTCGCCATGGCTCCCAGCGAGAATGCGTCTCGCTCCAGTCTCCCCCAGCC
AGTGCAAACCCTCCTGCTTGAAGACATGGACCTCCTGGGGGTCGTGTTGT
CCTGGGCGACGGGCGAGGTGCCGTCGGTGGACGGAGACTTCAGCGAGGCG
GAGTCACGTCGAAATTCGGAGGTTTGCGTGGACCGTGTGTGTGTTTTGTT
GTTTGTGATGATTTCAGCCATTTTTATGCGCCGGAGTGACGGAGGAGGCA
CTTCCGTTTTTTTTCTTTTTTTCTTGTCCTCATATTTATATGAATATATT
TTAAACATACCCGCTTCCTTCCACCCACTCACAATCCGCTGGCTTCCTTG
ATCAATCGCCTTTGCACCATTTACACCAAATTATAGGCGGCGGAAAGTGC
CAGACGCATGATTCGACAGACACATCTGCGGACCGCGGGCGCCAGTGTGA
CACCTCCTCCTCCCCATCCTCTCCTGCCGAGTGGACCACCCTCGTCCACC
GCACCGACTAACCCAGCTGCACCACCTCCCTCTCCCTCTCCCTCTCCATC
TCCACCACCATTACCATCACCACCACCACCACCACCACCACGGTTGCAAG
CGACGGCGGGGAATCGACCATCGACAGAAGCCTCTTTGAGAGCGCATGCG
ACGGGCCTAGTCTCTGCTGTGCTGGTGGCATCGCGGCAGGCCACCGACCT
GGTCGTGAACAAGGGCTTCGGGAGCGACCTGATGCAGAGGCTTAGGGAAG
GCCCCGTGGCTGAACATTTAAGGTTTGAGGCGGAGAGCGCCGCTAGAGCA
GAAGGAGGGGAAGCAGACGGCGCCTCGGCAGCGGCGGCGGCAGCGGCGGC
TTCGCTAGAAGTGGCCGTGCGTGGGGGGCTGTGCGATGGTGAT back to topCoding sequence (CDS) from alignment at H-paniculata_contig2145:6937..16579+ >mRNA_H-paniculata_contig2145.5646.1 ID=mRNA_H-paniculata_contig2145.5646.1|Name=mRNA_H-paniculata_contig2145.5646.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2286bp|location=Sequence derived from alignment at H-paniculata_contig2145:6937..16579+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAGAGAAGGAGGCCTAGGAGCGGAAGTGGAAGTGGCAGTGGCTTGAG
AGGAGGAGCGCCATCGCTCGGCAGACACATGGAGAGAAGGAGGCCTAGGA
GCGGAAGTGGAAGTGGCAGTGGCTTGAGAGGAGGAGCGCCATCGCTCGGC
AGACACGTGGACAACGTCCGGGACCGAGAACAGCTATACGTGACCGAGTT
CGAAATTCTGCTGTCGGCGGCCAAGAATCGGATATTGCCTCCTGATGTGC
CTCTGCACTTCTTTCTAACGCCAGTCGTGACCAGACTAGCGGAGATCGCG
GAAATTCTCGAGGTGGACAACGTCCGGGACCGAGAACAGCTATACGTGAC
CGAGTTCGAAATTCTGCTGTCGGCGGCCAAGAATCGGATATTGCCTCCTG
ATGTGCCTCTGCACTTCTTTCTAACGCCAGTCGTGACCAGACTAGCGGAG
ATCGCGGAAATTCTCGAGCATGCATACACACGCCAGCCTGGCGTGAACGC
GTTTGACAACAGGAGAGATTCCCACGCGATTGGTCAAGTCATCCGATTGG
CCACCCTGGACGTCAACGAGCACAATACCCGTTACAGCCACTCCAATCAT
GCATACACACGCCAGCCTGGCGTGAACGCGTTTGACAACAGGAGAGATTC
CCACGCGATTGGTCAAGTCATCCGATTGGCCACCCTGGACGTCAACGAGC
ACAATACCCGTTACAGCCACTCCAATGTGTCTCCGTTGATCTCCAACGTC
TTGTTTTCGCTCTTGCGCAGCGGGGGCGGGGGGGGCGGAGCAGTCTCCGC
GGCCGCCTTGTGCAGGTGTCTCCGTTGATCTCCAACGTCTTGTTTTCGCT
CTTGCGCAGCGGGGGCGGGGGGGGCGGAGCAGTCTCCGCGGCCGCCTTGT
GCAGGTTCCTGACATCCGTCGCCATGGCTCCCAGCGAGAATGCGTCTCGC
TCCAGTCTCCCCCAGCCAGTGCAAACCCTCCTGCTTGAAGACATGGACCT
CCTGGGGGTCGTGTTGTCCTGGGCGACGGGCGAGGTGCCGTCGGTGGACG
GAGACTTCAGCGAGGCGGAGTCACGTCGAAATTCGGAGGTTCCTGACATC
CGTCGCCATGGCTCCCAGCGAGAATGCGTCTCGCTCCAGTCTCCCCCAGC
CAGTGCAAACCCTCCTGCTTGAAGACATGGACCTCCTGGGGGTCGTGTTG
TCCTGGGCGACGGGCGAGGTGCCGTCGGTGGACGGAGACTTCAGCGAGGC
GGAGTCACGTCGAAATTCGGAGGCGGCGGAAAGTGCCAGACGCATGATTC
GACAGACACATCTGCGGACCGCGGGCGCCAGTGTGACACCTCCTCCTCCC
CATCCTCTCCTGCCGAGTGGACCACCCTCGTCCACCGCACCGACTAACCC
AGCTGCACCACCTCCCTCTCCCTCTCCCTCTCCATCTCCACCACCATTAC
CATCACCACCACCACCACCACCACCACGGTTGCAAGCGACGGCGGGGAAT
CGACCATCGACAGAAGCCTCTTTGAGAGCGCATGCGACGGGCCTAGTCTC
TGCTGTGCTGGTGGCATCGCGGCAGGCCACCGACCTGGTCGTGAACAAGG
GCTTCGGGAGCGACCTGATGCAGAGGCTTAGGGAAGGCCCCGTGGCTGAA
CATTTAAGGTTTGAGGCGGAGAGCGCCGCTAGAGCAGAAGGAGGGGAAGC
AGACGGCGCCTCGGCAGCGGCGGCGGCAGCGGCGGCTTCGCTAGAAGTGG
CCGTGCGTGGGGGGCTGTGCGATGGTGATGCGGCGGAAAGTGCCAGACGC
ATGATTCGACAGACACATCTGCGGACCGCGGGCGCCAGTGTGACACCTCC
TCCTCCCCATCCTCTCCTGCCGAGTGGACCACCCTCGTCCACCGCACCGA
CTAACCCAGCTGCACCACCTCCCTCTCCCTCTCCCTCTCCATCTCCACCA
CCATTACCATCACCACCACCACCACCACCACCACGGTTGCAAGCGACGGC
GGGGAATCGACCATCGACAGAAGCCTCTTTGAGAGCGCATGCGACGGGCC
TAGTCTCTGCTGTGCTGGTGGCATCGCGGCAGGCCACCGACCTGGTCGTG
AACAAGGGCTTCGGGAGCGACCTGATGCAGAGGCTTAGGGAAGGCCCCGT
GGCTGAACATTTAAGGTTTGAGGCGGAGAGCGCCGCTAGAGCAGAAGGAG
GGGAAGCAGACGGCGCCTCGGCAGCGGCGGCGGCAGCGGCGGCTTCGCTA
GAAGTGGCCGTGCGTGGGGGGCTGTGCGATGGTGAT back to top
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