prot_H-paniculata_contig21440.5644.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig21440.5644.1
Unique Nameprot_H-paniculata_contig21440.5644.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length561
Homology
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BLAST of mRNA_H-paniculata_contig21440.5644.1 vs. uniprot
Match: D8LDA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDA8_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 4.600e-15
Identity = 69/164 (42.07%), Postives = 81/164 (49.39%), Query Frame = 0 
Query:  393 VLLHVCSGPGSILAVRQVLAEESRKTRVSVFHALNVGEQGGVSDVHRKNCGGXXXXXXXXTENEGIGCRLGG-TTVAALGSLRRHGAYCVVELGFPNTAVDGGDDYGAGGGSNGGKEGEGERSGVGAPGGLGWFVVSIKFGRVDVPRMDGGETAGGERLAVRLT 555
            +LLH C+GPG++LAVR+ L                  E+GG   V     GG            G+GCR+GG TTVAALGSLR+HGAYCVVEL  P T V  G   G G G  G KE              GW V S+ FGRV+    DG   A  E+LA R T
Sbjct:  368 LLLHACAGPGTLLAVREAL------------------EEGGAEPVGGGGAGGDGDCA------RGVGCRVGGGTTVAALGSLRQHGAYCVVELDMPAT-VPPGPRSGNGSGGVGAKE--------------GWSVASVAFGRVEAA--DGDPEAEREKLAHRAT 490
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BLAST of mRNA_H-paniculata_contig21440.5644.1 vs. uniprot
Match: A0A6H5KN29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN29_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 3.200e-14
Identity = 68/164 (41.46%), Postives = 80/164 (48.78%), Query Frame = 0 
Query:  393 VLLHVCSGPGSILAVRQVLAEESRKTRVSVFHALNVGEQGGVSDVHRKNCGGXXXXXXXXTENEGIGCRLGG-TTVAALGSLRRHGAYCVVELGFPNTAVDGGDDYGAGGGSNGGKEGEGERSGVGAPGGLGWFVVSIKFGRVDVPRMDGGETAGGERLAVRLT 555
            +LLH C+GPG+ LAVR+ L                  E+GG   V     GG         +  G+GCR+GG  TVAALGSLR+HGAYCVVEL  P T V  G   G             E  GVGA    GW V S+ FGRV+    DG   A  E+LA R T
Sbjct:  230 LLLHACAGPGTFLAVREAL------------------EEGGAEPVGGGGAGGDG-------DCAGVGCRVGGGATVAALGSLRQHGAYCVVELDMP-TPVPPGPRSGN------------ESGGVGAK--EGWSVASVAFGRVEAA--DGDPEAEREKLARRAT 351
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21440.5644.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDA8_ECTSI4.600e-1542.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KN29_9PHAE3.200e-1441.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21440contigH-paniculata_contig21440:1461..4096 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21440.5644.1mRNA_H-paniculata_contig21440.5644.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig21440 1399..4282 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig21440.5644.1 ID=prot_H-paniculata_contig21440.5644.1|Name=mRNA_H-paniculata_contig21440.5644.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=561bp
MPSVRLHGSSTDNKDGQTGARQAASSQSNQLKTVKEGRSLRSGSGSRGNK
TERAEALPQGAGDIGKSKGGAATGMGYSGLLQLTPTSKNLHCRDLRLAPG
LSAAGFAEETLTLPSSPRSVSAVVKSVSVSTSTAATPPVYDGGDVSPGPI
DAALQAICRGPKGPAPGSAENGGGDGDGGCRNGSAGAGAASRRLMLPEAV
VLLTRLGGPRCETVVREEVEGGNSRRGGNKTPTPPQQQLRAREGAAVGET
EAGGWKGLFRRDENNATSLEGEEEDNSPPAVRSGEAVETENTWEKNAMEC
PAACPEQDDSLEEHEASAAAVATACRLRRFWNHSTAASAAVAVVASEQNE
SCSGLARGSTGDKPPNSAITSTATTTTTVGGATVAILPRKRTVLLHVCSG
PGSILAVRQVLAEESRKTRVSVFHALNVGEQGGVSDVHRKNCGGGGGSGG
GGTENEGIGCRLGGTTVAALGSLRRHGAYCVVELGFPNTAVDGGDDYGAG
GGSNGGKEGEGERSGVGAPGGLGWFVVSIKFGRVDVPRMDGGETAGGERL
AVRLTAVDSD*
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