prot_H-paniculata_contig2138.5620.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2138.5620.1
Unique Nameprot_H-paniculata_contig2138.5620.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length141
Homology
BLAST of mRNA_H-paniculata_contig2138.5620.1 vs. uniprot
Match: A0A6H5JIL6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIL6_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 4.920e-33
Identity = 71/95 (74.74%), Postives = 78/95 (82.11%), Query Frame = 0
Query:   26 GFLSGYPNLPHNELHQDWQSRFLFGFQFFLKLAPAVQLQLMVAGALEGLKYGLIKSVSPLAAIEEAKDLQVDDEIDAIRSAAAASKGEGSDGGSA 120
            GFLSGYPNLPHNELHQDWQSRF FG QFF KLAPAVQ QL +AGAL G KYGLIK+V+PLA  EEAKDL  D E+DAIR+AA A KG+ + G SA
Sbjct:  497 GFLSGYPNLPHNELHQDWQSRFKFGLQFFFKLAPAVQFQLALAGALSGWKYGLIKAVTPLAEAEEAKDLLFDAEVDAIRAAAKA-KGDAASGASA 590          
BLAST of mRNA_H-paniculata_contig2138.5620.1 vs. uniprot
Match: A0A290WNI4_PETFA (Lycopene beta-cyclase n=2 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A290WNI4_PETFA)

HSP 1 Score: 129 bits (323), Expect = 3.030e-32
Identity = 64/83 (77.11%), Postives = 72/83 (86.75%), Query Frame = 0
Query:   26 GFLSGYPNLPHNELHQDWQSRFLFGFQFFLKLAPAVQLQLMVAGALEGLKYGLIKSVSPLAAIEEAKDLQVDDEIDAIRSAAA 108
            GFLSGYPNLPHNELHQDWQSRF FGFQFFLKLAPAVQ QL +AGAL G KYGLI++V+PLA  E+AKDL  D E++ IR+AAA
Sbjct:  426 GFLSGYPNLPHNELHQDWQSRFKFGFQFFLKLAPAVQFQLALAGALSGWKYGLIRAVTPLAESEDAKDLLFDAEVEGIRAAAA 508          
BLAST of mRNA_H-paniculata_contig2138.5620.1 vs. uniprot
Match: A0A290WNI7_UNDPI (Lycopene beta-cyclase n=1 Tax=Undaria pinnatifida TaxID=74381 RepID=A0A290WNI7_UNDPI)

HSP 1 Score: 127 bits (320), Expect = 8.320e-32
Identity = 64/83 (77.11%), Postives = 72/83 (86.75%), Query Frame = 0
Query:   26 GFLSGYPNLPHNELHQDWQSRFLFGFQFFLKLAPAVQLQLMVAGALEGLKYGLIKSVSPLAAIEEAKDLQVDDEIDAIRSAAA 108
            GFLSGYPNLP+NELHQ WQ RF FG QFFLKLAPAVQ QL +AGAL G +YGLI +VSPLAA+E+AKDLQ D E++AIRSAAA
Sbjct:  429 GFLSGYPNLPYNELHQTWQGRFGFGVQFFLKLAPAVQFQLALAGALNGWQYGLISAVSPLAAVEDAKDLQFDSEVEAIRSAAA 511          
BLAST of mRNA_H-paniculata_contig2138.5620.1 vs. uniprot
Match: A0A290WNK2_9PHAE (Lycopene beta-cyclase n=1 Tax=Saccharina sculpera TaxID=416830 RepID=A0A290WNK2_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 1.120e-30
Identity = 62/83 (74.70%), Postives = 71/83 (85.54%), Query Frame = 0
Query:   26 GFLSGYPNLPHNELHQDWQSRFLFGFQFFLKLAPAVQLQLMVAGALEGLKYGLIKSVSPLAAIEEAKDLQVDDEIDAIRSAAA 108
            GFLSGYPNLP+NELHQ WQ RF FG QFF KLAPAVQ QL +AGAL G +YGLI +VSPLAA+E+AKDL+ D E++AIRSAAA
Sbjct:  427 GFLSGYPNLPYNELHQTWQGRFGFGLQFFFKLAPAVQFQLALAGALSGWQYGLIAAVSPLAAVEDAKDLKFDSEVEAIRSAAA 509          
BLAST of mRNA_H-paniculata_contig2138.5620.1 vs. uniprot
Match: A0A290WNK0_9PHAE (Lycopene beta-cyclase n=3 Tax=Sargassum TaxID=3015 RepID=A0A290WNK0_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 3.900e-30
Identity = 63/84 (75.00%), Postives = 70/84 (83.33%), Query Frame = 0
Query:   26 GFLSGYPNLPHNELHQDWQSRFLFGFQFFLKLAPAVQLQLMVAGALEGLKYGLIKSVSPLAAIEEAKDLQVDDEIDAIRSAAAA 109
            GFLSGYPNLPHNELHQDWQ R  FGFQFFLKL P VQLQLM AG L G +YGLI+SVSPLA+ EEAKDL+  DE ++IR+AA A
Sbjct:  423 GFLSGYPNLPHNELHQDWQGRLGFGFQFFLKLPPLVQLQLMKAGVLNGWRYGLIRSVSPLASGEEAKDLRFADEAESIRAAAIA 506          
BLAST of mRNA_H-paniculata_contig2138.5620.1 vs. uniprot
Match: A0A290WNI6_9PHAE (Lycopene beta-cyclase n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A290WNI6_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 1.190e-27
Identity = 59/84 (70.24%), Postives = 67/84 (79.76%), Query Frame = 0
Query:   26 GFLSGYPNLPHNELHQDWQSRFLFGFQFFLKLAPAVQLQLMVAGALEGLKYGLIKSVSPLAAIEEAKDLQVDDEIDAIRSAAAA 109
            GFLSGYPNLPHNE+HQ WQ RF FG QFF KLAPAVQ QL +AGAL G +YGLI +V+PLA  E+AKD   D EI+ IR+AAAA
Sbjct:  426 GFLSGYPNLPHNEMHQTWQKRFNFGLQFFFKLAPAVQFQLALAGALSGWQYGLIAAVTPLAEGEDAKDRLFDSEIEGIRAAAAA 509          
BLAST of mRNA_H-paniculata_contig2138.5620.1 vs. uniprot
Match: A0A290WNJ8_9PHAE (Lycopene beta-cyclase n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A290WNJ8_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 4.640e-27
Identity = 58/86 (67.44%), Postives = 71/86 (82.56%), Query Frame = 0
Query:   26 GFLSGYPNLPHNELHQDWQSRFLFGFQFFLKLAPAVQLQLMVAGALEGLKYGLIKSVSPLAAIEEAKDLQVDDEIDAIRSAAAASK 111
            GFLSGYPNLPHNE  Q+W  RF FGFQFFLKLAPAVQL+LM AGAL G + GLI+SVSP++ +E+++DL  D EI+AIR  AAA++
Sbjct:  425 GFLSGYPNLPHNEHQQEWYKRFAFGFQFFLKLAPAVQLKLMAAGALNGWRDGLIRSVSPMSILEDSQDLGFDAEIEAIRLKAAATE 510          
BLAST of mRNA_H-paniculata_contig2138.5620.1 vs. uniprot
Match: A0A290WNJ9_9PHAE (Lycopene beta-cyclase n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A290WNJ9_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 1.070e-24
Identity = 67/119 (56.30%), Postives = 80/119 (67.23%), Query Frame = 0
Query:   26 GFLSGYPNLPHNELHQDWQSRFLFGFQFFLKLAPAVQLQLMVAGALEGLKYGLIKSVSPLAAIEEAKDLQVDDEIDAIRSAAAASK--GEGSDG--GSAGIGTAEGGVIGDEAKELVSV 140
            GFLSGYPNLP+NE HQDWQ RF FG QFF KL PAVQL+L +AGA  G K+GL+++V+PLA   EA +   D EI+AIR AA A    G+G+DG  G  G   A  G +    KEL SV
Sbjct:  428 GFLSGYPNLPYNERHQDWQGRFSFGVQFFFKLPPAVQLKLALAGAANGWKHGLLQAVTPLAESAEAVESGFDAEIEAIRRAADAKTTGGDGADGDGGKEGETQAVAGRVEGGTKELTSV 546          
BLAST of mRNA_H-paniculata_contig2138.5620.1 vs. uniprot
Match: A0A835YM92_9STRA (Lycopene beta cyclase chloroplast n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM92_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 8.750e-13
Identity = 37/68 (54.41%), Postives = 45/68 (66.18%), Query Frame = 0
Query:   26 GFLSGYPNLPHNELHQDWQSRFLFGFQFFLKLAPAVQLQLMVAGALEGLKYGLIKSVSPLAAIEEAKD 93
            GFLSGYP LPHNE+HQ W  RFLFG Q +L     V++ L V     GL+ GL+KSV+PL+  E  KD
Sbjct:  419 GFLSGYPGLPHNEMHQSWGQRFLFGVQLWLYAPVPVKVALAVDAIKTGLQLGLVKSVTPLSDAEYDKD 486          
BLAST of mRNA_H-paniculata_contig2138.5620.1 vs. uniprot
Match: A0A8J6C9N2_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C9N2_DIALT)

HSP 1 Score: 51.2 bits (121), Expect = 9.840e-5
Identity = 26/65 (40.00%), Postives = 38/65 (58.46%), Query Frame = 0
Query:   26 GFLSGYPNLPHNELHQDWQSRFLFGFQFFLKLAPAVQLQLMVAGALEGLKYGLIKSVSPLAAIEE 90
            GFL+G+  LPHN+ H  W  R +FG + +L + PAV+LQL +     G   GL+   S L  ++E
Sbjct:  418 GFLAGWRGLPHNDAHDVWHRRLMFGVRMWLLVPPAVKLQLALTAVFSG---GLVFFRSVLPVLQE 479          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2138.5620.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5JIL6_9PHAE4.920e-3374.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A290WNI4_PETFA3.030e-3277.11Lycopene beta-cyclase n=2 Tax=Scytosiphonaceae Tax... [more]
A0A290WNI7_UNDPI8.320e-3277.11Lycopene beta-cyclase n=1 Tax=Undaria pinnatifida ... [more]
A0A290WNK2_9PHAE1.120e-3074.70Lycopene beta-cyclase n=1 Tax=Saccharina sculpera ... [more]
A0A290WNK0_9PHAE3.900e-3075.00Lycopene beta-cyclase n=3 Tax=Sargassum TaxID=3015... [more]
A0A290WNI6_9PHAE1.190e-2770.24Lycopene beta-cyclase n=1 Tax=Punctaria latifolia ... [more]
A0A290WNJ8_9PHAE4.640e-2767.44Lycopene beta-cyclase n=1 Tax=Ishige okamurae TaxI... [more]
A0A290WNJ9_9PHAE1.070e-2456.30Lycopene beta-cyclase n=1 Tax=Dictyopteris undulat... [more]
A0A835YM92_9STRA8.750e-1354.41Lycopene beta cyclase chloroplast n=1 Tax=Tribonem... [more]
A0A8J6C9N2_DIALT9.840e-540.00Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2138contigH-paniculata_contig2138:198..2667 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2138.5620.1mRNA_H-paniculata_contig2138.5620.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2138 147..3364 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2138.5620.1 ID=prot_H-paniculata_contig2138.5620.1|Name=mRNA_H-paniculata_contig2138.5620.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=141bp
MRPSVRSSVPVPVPTSPCLFSCPQQGFLSGYPNLPHNELHQDWQSRFLFG
FQFFLKLAPAVQLQLMVAGALEGLKYGLIKSVSPLAAIEEAKDLQVDDEI
DAIRSAAAASKGEGSDGGSAGIGTAEGGVIGDEAKELVSV*
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