mRNA_H-paniculata_contig2138.5620.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2138.5620.1
Unique NamemRNA_H-paniculata_contig2138.5620.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig2138.5620.1 vs. uniprot
Match: A0A6H5JIL6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIL6_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 5.900e-30
Identity = 71/95 (74.74%), Postives = 78/95 (82.11%), Query Frame = 1 
Query:  127 GFLSGYPNLPHNELHQDWQSRFLFGFQFFLKLAPAVQLQLMVAGALEGLKYGLIKSVSPLAAIEEAKDLQVDDEIDAIRSAAAASKGEGSDGGSA 411
            GFLSGYPNLPHNELHQDWQSRF FG QFF KLAPAVQ QL +AGAL G KYGLIK+V+PLA  EEAKDL  D E+DAIR+AA A KG+ + G SA
Sbjct:  497 GFLSGYPNLPHNELHQDWQSRFKFGLQFFFKLAPAVQFQLALAGALSGWKYGLIKAVTPLAEAEEAKDLLFDAEVDAIRAAAKA-KGDAASGASA 590
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BLAST of mRNA_H-paniculata_contig2138.5620.1 vs. uniprot
Match: A0A290WNI4_PETFA (Lycopene beta-cyclase n=2 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A290WNI4_PETFA)

HSP 1 Score: 129 bits (323), Expect = 3.280e-29
Identity = 64/83 (77.11%), Postives = 72/83 (86.75%), Query Frame = 1 
Query:  127 GFLSGYPNLPHNELHQDWQSRFLFGFQFFLKLAPAVQLQLMVAGALEGLKYGLIKSVSPLAAIEEAKDLQVDDEIDAIRSAAA 375
            GFLSGYPNLPHNELHQDWQSRF FGFQFFLKLAPAVQ QL +AGAL G KYGLI++V+PLA  E+AKDL  D E++ IR+AAA
Sbjct:  426 GFLSGYPNLPHNELHQDWQSRFKFGFQFFLKLAPAVQFQLALAGALSGWKYGLIRAVTPLAESEDAKDLLFDAEVEGIRAAAA 508
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BLAST of mRNA_H-paniculata_contig2138.5620.1 vs. uniprot
Match: A0A290WNI7_UNDPI (Lycopene beta-cyclase n=1 Tax=Undaria pinnatifida TaxID=74381 RepID=A0A290WNI7_UNDPI)

HSP 1 Score: 127 bits (320), Expect = 8.710e-29
Identity = 64/83 (77.11%), Postives = 72/83 (86.75%), Query Frame = 1 
Query:  127 GFLSGYPNLPHNELHQDWQSRFLFGFQFFLKLAPAVQLQLMVAGALEGLKYGLIKSVSPLAAIEEAKDLQVDDEIDAIRSAAA 375
            GFLSGYPNLP+NELHQ WQ RF FG QFFLKLAPAVQ QL +AGAL G +YGLI +VSPLAA+E+AKDLQ D E++AIRSAAA
Sbjct:  429 GFLSGYPNLPYNELHQTWQGRFGFGVQFFLKLAPAVQFQLALAGALNGWQYGLISAVSPLAAVEDAKDLQFDSEVEAIRSAAA 511
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BLAST of mRNA_H-paniculata_contig2138.5620.1 vs. uniprot
Match: A0A290WNK2_9PHAE (Lycopene beta-cyclase n=1 Tax=Saccharina sculpera TaxID=416830 RepID=A0A290WNK2_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 1.070e-27
Identity = 62/83 (74.70%), Postives = 71/83 (85.54%), Query Frame = 1 
Query:  127 GFLSGYPNLPHNELHQDWQSRFLFGFQFFLKLAPAVQLQLMVAGALEGLKYGLIKSVSPLAAIEEAKDLQVDDEIDAIRSAAA 375
            GFLSGYPNLP+NELHQ WQ RF FG QFF KLAPAVQ QL +AGAL G +YGLI +VSPLAA+E+AKDL+ D E++AIRSAAA
Sbjct:  427 GFLSGYPNLPYNELHQTWQGRFGFGLQFFFKLAPAVQFQLALAGALSGWQYGLIAAVSPLAAVEDAKDLKFDSEVEAIRSAAA 509
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BLAST of mRNA_H-paniculata_contig2138.5620.1 vs. uniprot
Match: A0A290WNK0_9PHAE (Lycopene beta-cyclase n=3 Tax=Sargassum TaxID=3015 RepID=A0A290WNK0_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 3.530e-27
Identity = 63/84 (75.00%), Postives = 70/84 (83.33%), Query Frame = 1 
Query:  127 GFLSGYPNLPHNELHQDWQSRFLFGFQFFLKLAPAVQLQLMVAGALEGLKYGLIKSVSPLAAIEEAKDLQVDDEIDAIRSAAAA 378
            GFLSGYPNLPHNELHQDWQ R  FGFQFFLKL P VQLQLM AG L G +YGLI+SVSPLA+ EEAKDL+  DE ++IR+AA A
Sbjct:  423 GFLSGYPNLPHNELHQDWQGRLGFGFQFFLKLPPLVQLQLMKAGVLNGWRYGLIRSVSPLASGEEAKDLRFADEAESIRAAAIA 506
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BLAST of mRNA_H-paniculata_contig2138.5620.1 vs. uniprot
Match: A0A290WNI6_9PHAE (Lycopene beta-cyclase n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A290WNI6_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 8.470e-25
Identity = 59/84 (70.24%), Postives = 67/84 (79.76%), Query Frame = 1 
Query:  127 GFLSGYPNLPHNELHQDWQSRFLFGFQFFLKLAPAVQLQLMVAGALEGLKYGLIKSVSPLAAIEEAKDLQVDDEIDAIRSAAAA 378
            GFLSGYPNLPHNE+HQ WQ RF FG QFF KLAPAVQ QL +AGAL G +YGLI +V+PLA  E+AKD   D EI+ IR+AAAA
Sbjct:  426 GFLSGYPNLPHNEMHQTWQKRFNFGLQFFFKLAPAVQFQLALAGALSGWQYGLIAAVTPLAEGEDAKDRLFDSEIEGIRAAAAA 509
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BLAST of mRNA_H-paniculata_contig2138.5620.1 vs. uniprot
Match: A0A290WNJ8_9PHAE (Lycopene beta-cyclase n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A290WNJ8_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 3.150e-24
Identity = 58/86 (67.44%), Postives = 71/86 (82.56%), Query Frame = 1 
Query:  127 GFLSGYPNLPHNELHQDWQSRFLFGFQFFLKLAPAVQLQLMVAGALEGLKYGLIKSVSPLAAIEEAKDLQVDDEIDAIRSAAAASK 384
            GFLSGYPNLPHNE  Q+W  RF FGFQFFLKLAPAVQL+LM AGAL G + GLI+SVSP++ +E+++DL  D EI+AIR  AAA++
Sbjct:  425 GFLSGYPNLPHNEHQQEWYKRFAFGFQFFLKLAPAVQLKLMAAGALNGWRDGLIRSVSPMSILEDSQDLGFDAEIEAIRLKAAATE 510
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BLAST of mRNA_H-paniculata_contig2138.5620.1 vs. uniprot
Match: A0A290WNJ9_9PHAE (Lycopene beta-cyclase n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A290WNJ9_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 5.710e-22
Identity = 67/119 (56.30%), Postives = 80/119 (67.23%), Query Frame = 1 
Query:  127 GFLSGYPNLPHNELHQDWQSRFLFGFQFFLKLAPAVQLQLMVAGALEGLKYGLIKSVSPLAAIEEAKDLQVDDEIDAIRSAAAASK--GEGSDG--GSAGIGTAEGGVIGDEAKELVSV 471
            GFLSGYPNLP+NE HQDWQ RF FG QFF KL PAVQL+L +AGA  G K+GL+++V+PLA   EA +   D EI+AIR AA A    G+G+DG  G  G   A  G +    KEL SV
Sbjct:  428 GFLSGYPNLPYNERHQDWQGRFSFGVQFFFKLPPAVQLKLALAGAANGWKHGLLQAVTPLAESAEAVESGFDAEIEAIRRAADAKTTGGDGADGDGGKEGETQAVAGRVEGGTKELTSV 546
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BLAST of mRNA_H-paniculata_contig2138.5620.1 vs. uniprot
Match: A0A835YM92_9STRA (Lycopene beta cyclase chloroplast n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM92_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 9.160e-11
Identity = 37/68 (54.41%), Postives = 45/68 (66.18%), Query Frame = 1 
Query:  127 GFLSGYPNLPHNELHQDWQSRFLFGFQFFLKLAPAVQLQLMVAGALEGLKYGLIKSVSPLAAIEEAKD 330
            GFLSGYP LPHNE+HQ W  RFLFG Q +L     V++ L V     GL+ GL+KSV+PL+  E  KD
Sbjct:  419 GFLSGYPGLPHNEMHQSWGQRFLFGVQLWLYAPVPVKVALAVDAIKTGLQLGLVKSVTPLSDAEYDKD 486
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2138.5620.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5JIL6_9PHAE5.900e-3074.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A290WNI4_PETFA3.280e-2977.11Lycopene beta-cyclase n=2 Tax=Scytosiphonaceae Tax... [more]
A0A290WNI7_UNDPI8.710e-2977.11Lycopene beta-cyclase n=1 Tax=Undaria pinnatifida ... [more]
A0A290WNK2_9PHAE1.070e-2774.70Lycopene beta-cyclase n=1 Tax=Saccharina sculpera ... [more]
A0A290WNK0_9PHAE3.530e-2775.00Lycopene beta-cyclase n=3 Tax=Sargassum TaxID=3015... [more]
A0A290WNI6_9PHAE8.470e-2570.24Lycopene beta-cyclase n=1 Tax=Punctaria latifolia ... [more]
A0A290WNJ8_9PHAE3.150e-2467.44Lycopene beta-cyclase n=1 Tax=Ishige okamurae TaxI... [more]
A0A290WNJ9_9PHAE5.710e-2256.30Lycopene beta-cyclase n=1 Tax=Dictyopteris undulat... [more]
A0A835YM92_9STRA9.160e-1154.41Lycopene beta cyclase chloroplast n=1 Tax=Tribonem... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2138contigH-paniculata_contig2138:147..3364 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score132.1
Seed ortholog evalue2e-28
Seed eggNOG ortholog2880.D8LTG3
Preferred nameLCYB
KEGG rclassRC01004,RC01612,RC01964,RC02020,RC02021
KEGG koko:K06443,ko:K06444,ko:K14593
KEGG ReactionR03824,R04801,R05341,R06960,R06962,R06963,R07320,R07321,R07840,R07856
KEGG Pathwayko00906,ko01100,ko01110,map00906,map01100,map01110
KEGG ModuleM00097
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006720,GO:0006721,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009507,GO:0009509,GO:0009536,GO:0009975,GO:0009987,GO:0016108,GO:0016109,GO:0016114,GO:0016116,GO:0016117,GO:0016853,GO:0016860,GO:0042440,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0045436,GO:0046148,GO:0071704,GO:1901576
EggNOG free text desc.tetraterpenoid biosynthetic process
EggNOG OGs2CN09@1,2QT2F@2759
EC5.3.99.8,5.5.1.18,5.5.1.19
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons2
Model size1171
Cds size423
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2138.5620.1prot_H-paniculata_contig2138.5620.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2138 198..2667 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929574.7529309-UTR-H-paniculata_contig2138:146..1971622929574.7529309-UTR-H-paniculata_contig2138:146..197Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2138 147..197 +
1691480920.0762615-UTR-H-paniculata_contig2138:146..1971691480920.0762615-UTR-H-paniculata_contig2138:146..197Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2138 147..197 +
1622929574.8107204-UTR-H-paniculata_contig2138:2667..33641622929574.8107204-UTR-H-paniculata_contig2138:2667..3364Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2138 2668..3364 +
1691480920.1033595-UTR-H-paniculata_contig2138:2667..33641691480920.1033595-UTR-H-paniculata_contig2138:2667..3364Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2138 2668..3364 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929574.774067-CDS-H-paniculata_contig2138:197..3651622929574.774067-CDS-H-paniculata_contig2138:197..365Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2138 198..365 +
1691480920.0883036-CDS-H-paniculata_contig2138:197..3651691480920.0883036-CDS-H-paniculata_contig2138:197..365Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2138 198..365 +
1622929574.7903316-CDS-H-paniculata_contig2138:2412..26671622929574.7903316-CDS-H-paniculata_contig2138:2412..2667Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2138 2413..2667 +
1691480920.096029-CDS-H-paniculata_contig2138:2412..26671691480920.096029-CDS-H-paniculata_contig2138:2412..2667Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2138 2413..2667 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2138.5620.1

>prot_H-paniculata_contig2138.5620.1 ID=prot_H-paniculata_contig2138.5620.1|Name=mRNA_H-paniculata_contig2138.5620.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=141bp
MRPSVRSSVPVPVPTSPCLFSCPQQGFLSGYPNLPHNELHQDWQSRFLFG
FQFFLKLAPAVQLQLMVAGALEGLKYGLIKSVSPLAAIEEAKDLQVDDEI
DAIRSAAAASKGEGSDGGSAGIGTAEGGVIGDEAKELVSV*
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mRNA from alignment at H-paniculata_contig2138:147..3364+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2138.5620.1 ID=mRNA_H-paniculata_contig2138.5620.1|Name=mRNA_H-paniculata_contig2138.5620.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3218bp|location=Sequence derived from alignment at H-paniculata_contig2138:147..3364+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTTTTGTTTGTTTTATATTGCTTGTCTTTTTTTCGTCACTTTCCATTCTC
AATGCGTCCCTCCGTCCGTTCGTCCGTCCCCGTCCCCGTCCCCACCTCCC
CCTGTTTATTTTCGTGTCCACAACAGGGGTTTCTCTCTGGCTACCCTAAT
CTGCCGCACAACGAGCTGCACCAGGACTGGCAGAGCCGTTTCTTGTTTGG
TTTCCAATTCTTTTTGAAGGTATGTAGAGCTAGCTCCATGTACGATGCCA
CTTATTACGGACAAGGAGGAACAGAGAGAAATATTGTCGGCGGTCCAAGC
CTCCTGCAGGGGCTGCCAGAATCACCTCCTCATTCGCGAGGGAGTTTTCG
TTTTAGTTGGCAAGCCGCTGAATATTCGTTGCTGTGTCGCAGCGGAACCG
CCTTGAAGTGTGCACCAAATTTGTTACCCTGCAACAGATGGTCCAATTTA
AGGTACAGGGCCATTGTGCTGATCCAATGAAAGGTACCTCGTTGGGTGTA
GGTGCTGCACCTTACTGCACGTACAGCTCCCTACATGCTAAATCCGTTAA
AGCGAAGTAGTGCAGACAAACTCTGAGGGAAAAAAATATATATTCGGTGG
CGGCACCTTGCAGGCGGGGGGGATGAGGGGGAGCGCAGGGTTACCTAATG
TATTGGGCTCCACTTGGGTGTGATAGGCAAAGGAGAGTGTAGTTTTCGAT
TTTCCCTCTTATTTGTAATCGGTAAAATCGAAGTTCGCTTTTCCGTTAGT
TGTCGTGCATCAAACGACCCCACTTGCTCTCGTGAATTTAATTCGGTATA
ACCAATGTAGAGAATCGTCAAGGTTTCGCCAACTTCTGGGCAATAATGAC
ATGCTGTATCTTACTAGGACATTGGCCTTCTATTGTTGTTCTTGAAGCCC
ATCGACTGGAATGTGAAAAACAATAGAACAACTAGCCACAGAGGTGCGGC
TTTAGGGCAAAAAAAAAGGGAATAGTATTGGAATGGAATTCGAACGAAGA
GCACCATCAACGTAAATCTCCTCGCAGGAGGCTCTCTCTCTCTACCTTTT
CAACACGCCAAAAACTAAATACAACCAATTTGCAAGGGCTAGAGCAACAA
CAGCAACCGGTTCTTCCACAGCCCATGGGCCAACTATTAAACGGCAGCCC
TCTGTTTTTTTTGCTTTTTTTTTCCAGTAAAAGTACGAATGCCTTCATGC
TGCGAGCTAAAAAAAATGCGGGGGTGCGCTCATGCTCTAGAATCGGTTCG
AATGGATTATGGAAAGTACGAAGTATTGTGCTGTCGTGGTCATGTTCCAA
AGTTCGCGACAGGTGCGAACTTTCGAAAAGAGAGATAAAAACGGCCAAGT
TTCCAAAAGCCATGGAATTTTTCGCGTTAATAACACCGAGTTGTCCCCTG
CCGGGACAGGCAGGGTGTTTATATAAACCGGGAGTCAAGCCGACTGCCGC
TAGCACAGTGCGTTCGTTGGATAACAGCACTTCCTGTTAGTGCCCGTCTC
TTCGTTTCCAATCAAACCCAAACAATGAGATGTGAACGCTCCAAACCTTT
TCATCATGTAAAGCTGAAGCTGATGTCCAGATCCTCTACATTTAAACAAG
ATGTCATTTGTCGCTCGTTATGGATCTAATTTTGTTGATGAAGGTGAACA
AATATGGTCTTTCATTAAAATTCACGTCTATCCCTTGTTAATTCAATTTT
GATGATGGGAGTATACAAGTGGTCATGGTCCAATTTTGATGATGAGTGTA
AACAACTGAAGTTTGAAGTCCGCTACAAAAACCTCAACATGGATACAAAG
CTAGTTATTATGTGAGCTTCAGACCTGTAGCCCAACATCCCCTCCCCCCC
TCCTACTGGTCATGATCTAATTTGATGATAGAGTGTACACAACTAAAGAT
CATGACCTATAGCCGAACATGCCCCCCTCCCCCTACTGGTCATGATTTAA
TTTTGCTGATAAGTGTACATAGCTGCAGATAAAAACGTCAGCTACATAAC
GTTGACATTGATATAAATGGACTAATAACATGAGATTCAGATTTATAGCT
ATTTTTACTACAATAATGAGAACTTCAGTTAGCAAAACGGAAGATTGTGT
TCAATTTTGATGATGTCAGTCGTCCGTCCATATGAGGACTATTTCATGGT
TTACCTACAGTACACATGCGAATGATACAGTGATATTCCCTTGTGAACCC
CCCCCCACCCACCCACCCACCCACCGTACCCCATCCTATCCACCCTCCCC
ATGCATACACGAACAGCTGGCTCCGGCAGTACAGCTTCAGCTCATGGTCG
CGGGGGCTCTAGAAGGATTGAAGTATGGCCTTATCAAGTCCGTATCGCCG
CTCGCCGCCATCGAAGAGGCCAAGGATTTACAGGTCGACGACGAGATCGA
TGCTATTCGATCGGCAGCAGCCGCCAGTAAAGGGGAAGGCAGTGACGGTG
GTTCGGCGGGGATAGGGACGGCAGAGGGAGGGGTAATAGGGGACGAAGCT
AAGGAGCTTGTTTCCGTTTGAGATACTAGATAAAAAGGGGAGGGGAGGGT
CACGCTGTCTTTTCTTTTTTTTCTTGCGTACGTTTTCTGTAGTCCTCGTG
TTGAGCTCGTGACGGGTATACACTTGAAGGGCGCCTCACGCGCGTCTTGC
GGAGGGGTTGCTTATGAGGGAAACAGGCATATATATCATTGGTACCGTTT
GTGATTGGGTTTTTCGCTGTGTTTCCCCTTGCGTTGTGCTTGGTGGTATG
TAAGCAGTGGCTTTTCGCGGGAGACGTGGCGTGTATCTTTTTTGTCTTGT
TCTAAAAATCATTTCGCGGAGCTTTTGCTGGATTCTGTGGTTGTGATTGT
GGTGCATAGAGGCGCCCGTCGTATAGTGTTGTTATAGTTCTTGCAATTGG
TCTAATTTAGTCTTCGGCGTGTTGAAAGGGTGGATGGGAAGGAGACAGAG
AGAGAGAGAGAGAGAGAGGGAGAGAGCCTTCATGGGAGGAAGTTTACGTT
GATGGTGCTCGTCATTCGAATTCCATTCCATTTTTTTAATTTTTTTTTTG
GTGAAGCCGCGCCTTTGTGGCTCGTCGTTCGGTTGTTTCTACATTCTAGT
CGATGGGTTCAAAGAGAATCGATGTCCTGTGAAGATTTAGTCGGGCCTTC
GGGTAACCGACACACGAACCCGGTTTCGGGGTAAGTGTTGGCAGAGGTTT
CCTCCCCTCCTTTCAAGG
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Coding sequence (CDS) from alignment at H-paniculata_contig2138:147..3364+

>mRNA_H-paniculata_contig2138.5620.1 ID=mRNA_H-paniculata_contig2138.5620.1|Name=mRNA_H-paniculata_contig2138.5620.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=846bp|location=Sequence derived from alignment at H-paniculata_contig2138:147..3364+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGTCCCTCCGTCCGTTCGTCCGTCCCCGTCCCCGTCCCCACCTCCCC
CTGTTTATTTTCGTGTCCACAACAGGGGTTTCTCTCTGGCTACCCTAATC
TGCCGCACAACGAGCTGCACCAGGACTGGCAGAGCCGTTTCTTGTTTGGT
TTCCAATTCTTTTTGAAGATGCGTCCCTCCGTCCGTTCGTCCGTCCCCGT
CCCCGTCCCCACCTCCCCCTGTTTATTTTCGTGTCCACAACAGGGGTTTC
TCTCTGGCTACCCTAATCTGCCGCACAACGAGCTGCACCAGGACTGGCAG
AGCCGTTTCTTGTTTGGTTTCCAATTCTTTTTGAAGCTGGCTCCGGCAGT
ACAGCTTCAGCTCATGGTCGCGGGGGCTCTAGAAGGATTGAAGTATGGCC
TTATCAAGTCCGTATCGCCGCTCGCCGCCATCGAAGAGGCCAAGGATTTA
CAGGTCGACGACGAGATCGATGCTATTCGATCGGCAGCAGCCGCCAGTAA
AGGGGAAGGCAGTGACGGTGGTTCGGCGGGGATAGGGACGGCAGAGGGAG
GGGTAATAGGGGACGAAGCTAAGGAGCTTGTTTCCGTTTGACTGGCTCCG
GCAGTACAGCTTCAGCTCATGGTCGCGGGGGCTCTAGAAGGATTGAAGTA
TGGCCTTATCAAGTCCGTATCGCCGCTCGCCGCCATCGAAGAGGCCAAGG
ATTTACAGGTCGACGACGAGATCGATGCTATTCGATCGGCAGCAGCCGCC
AGTAAAGGGGAAGGCAGTGACGGTGGTTCGGCGGGGATAGGGACGGCAGA
GGGAGGGGTAATAGGGGACGAAGCTAAGGAGCTTGTTTCCGTTTGA
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