prot_H-paniculata_contig2133.5604.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2133.5604.1
Unique Nameprot_H-paniculata_contig2133.5604.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length110
Homology
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BLAST of mRNA_H-paniculata_contig2133.5604.1 vs. uniprot
Match: B8CD91_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CD91_THAPS)

HSP 1 Score: 52.0 bits (123), Expect = 4.660e-6
Identity = 39/108 (36.11%), Postives = 48/108 (44.44%), Query Frame = 0 
Query:    5 QHSLEGLLLLVADGADVNATDSYGRTPLHAACKNVERLVDNPSRRARECVEFLLXXXXXXXXXXXXXXXXXXXXA-KTGMVGAAEALV-LAGSTGTADDAGNTPLHLA 110
            Q  L G++LL+  GADVN  D +GRTPLH A + V+      S    ECVE+LL                    A K G V     L+     T   D  GNT LH+A
Sbjct:   35 QCFLNGMMLLIQSGADVNLADVHGRTPLHLAAEKVD------SNEHHECVEYLLVNGARVDIQDCIDKRTPLHIASKRGCVRCINRLLQYKARTDITDSEGNTALHVA 136
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BLAST of mRNA_H-paniculata_contig2133.5604.1 vs. uniprot
Match: A0A7S4A3V7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A3V7_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 8.320e-6
Identity = 38/110 (34.55%), Postives = 49/110 (44.55%), Query Frame = 0 
Query:    1 MVAAQHSLEGLLLLVADGADVNATDSYGRTPLHAACKNVERLVDNPSRRARECVEFLLXXXXXXXXXXXXXXXXXXXXAKTGMVGAAEALVLAGSTGTADDAGNTPLHLA 110
            ++AAQ S EGL +L+A GAD N   + GRTPLH          D     A  C   LL                     + G +     L+  G++  ADDAGN+PLHLA
Sbjct:   98 LLAAQGSSEGLAVLLAHGADPNLRGARGRTPLHYVADGTNDDDDLDGAYAT-CASQLLDAGATVDARDAAGRTPLAVAVQAGRLSLVRVLLARGASLVADDAGNSPLHLA 206
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BLAST of mRNA_H-paniculata_contig2133.5604.1 vs. uniprot
Match: A0A8J2SKQ2_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SKQ2_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 1.170e-5
Identity = 38/110 (34.55%), Postives = 49/110 (44.55%), Query Frame = 0 
Query:    1 MVAAQHSLEGLLLLVADGADVNATDSYGRTPLHAACKNVERLVDNPSRRARECVEFLLXXXXXXXXXXXXXXXXXXXXAKTGMVGAAEALVLAGSTGTADDAGNTPLHLA 110
            ++AAQ S EGL +L+A GAD N   + GRTPLH          D     A  C   LL                     + G +     L+  G++  ADDAGN+PLHLA
Sbjct:   46 LLAAQGSSEGLAVLLAHGADPNLRGARGRTPLHYVADGTNDDDDLDGAYAT-CASQLLDAGATVDARDAAGRTPLAVAVQAGRLSLVRVLLARGASLVADDAGNSPLHLA 154
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2133.5604.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
B8CD91_THAPS4.660e-636.11Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S4A3V7_9STRA8.320e-634.55Hypothetical protein (Fragment) n=1 Tax=Pelagomona... [more]
A0A8J2SKQ2_9STRA1.170e-534.55Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 27..66
e-value: 0.013
score: 24.7
coord: 70..101
e-value: 15.0
score: 14.5
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 70..102
score: 9.431
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 27..69
score: 8.63
NoneNo IPR availableGENE3D1.25.40.960coord: 1..43
e-value: 1.9E-8
score: 36.3
NoneNo IPR availablePFAMPF13637Ank_4coord: 3..38
e-value: 1.6E-6
score: 28.5
NoneNo IPR availablePANTHERPTHR24134:SF1ANKYRIN REPEAT AND SOCS BOX PROTEIN 8coord: 48..110
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 48..110
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 2..95
NoneNo IPR availablePANTHERPTHR24134:SF1ANKYRIN REPEAT AND SOCS BOX PROTEIN 8coord: 2..95
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 44..110
e-value: 3.0E-13
score: 51.6
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 7..110
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 51..110
e-value: 1.3E-7
score: 32.1
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..110
score: 22.384

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2133contigH-paniculata_contig2133:7912..8241 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2133.5604.1mRNA_H-paniculata_contig2133.5604.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2133 7882..8241 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2133.5604.1 ID=prot_H-paniculata_contig2133.5604.1|Name=mRNA_H-paniculata_contig2133.5604.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=110bp
MVAAQHSLEGLLLLVADGADVNATDSYGRTPLHAACKNVERLVDNPSRRA
RECVEFLLSSGALKDARDTAGQTALHVAAKTGMVGAAEALVLAGSTGTAD
DAGNTPLHLA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom