mRNA_H-paniculata_contig2133.5604.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2133.5604.1 vs. uniprot
Match: B8CD91_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CD91_THAPS) HSP 1 Score: 62.4 bits (150), Expect = 6.450e-10 Identity = 44/122 (36.07%), Postives = 58/122 (47.54%), Query Frame = 1
Query: 1 RNSAGKTPLHMVAAQHSLEGLLLLVADGADVNATDSYGRTPLHAACKNVERLVDNPSRRARECVEFLLXXXXXXXXXXXXXXXXXXXXA-KTGMVGAAEALV-LAGSTGTADDAGNTPLHLA 360
RN+ G +PL + ++Q L G++LL+ GADVN D +GRTPLH A + V+ S ECVE+LL A K G V L+ T D GNT LH+A
Sbjct: 21 RNARGLSPLSISSSQCFLNGMMLLIQSGADVNLADVHGRTPLHLAAEKVD------SNEHHECVEYLLVNGARVDIQDCIDKRTPLHIASKRGCVRCINRLLQYKARTDITDSEGNTALHVA 136
BLAST of mRNA_H-paniculata_contig2133.5604.1 vs. uniprot
Match: A0A7S4A3V7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A3V7_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 3.520e-9 Identity = 42/119 (35.29%), Postives = 55/119 (46.22%), Query Frame = 1
Query: 4 NSAGKTPLHMVAAQHSLEGLLLLVADGADVNATDSYGRTPLHAACKNVERLVDNPSRRARECVEFLLXXXXXXXXXXXXXXXXXXXXAKTGMVGAAEALVLAGSTGTADDAGNTPLHLA 360
N+ G + LH++AAQ S EGL +L+A GAD N + GRTPLH D A C LL + G + L+ G++ ADDAGN+PLHLA
Sbjct: 89 NAQGASSLHLLAAQGSSEGLAVLLAHGADPNLRGARGRTPLHYVADGTNDDDDLDGAYAT-CASQLLDAGATVDARDAAGRTPLAVAVQAGRLSLVRVLLARGASLVADDAGNSPLHLA 206
BLAST of mRNA_H-paniculata_contig2133.5604.1 vs. uniprot
Match: A0A8J2SKQ2_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SKQ2_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 6.920e-9 Identity = 42/119 (35.29%), Postives = 55/119 (46.22%), Query Frame = 1
Query: 4 NSAGKTPLHMVAAQHSLEGLLLLVADGADVNATDSYGRTPLHAACKNVERLVDNPSRRARECVEFLLXXXXXXXXXXXXXXXXXXXXAKTGMVGAAEALVLAGSTGTADDAGNTPLHLA 360
N+ G + LH++AAQ S EGL +L+A GAD N + GRTPLH D A C LL + G + L+ G++ ADDAGN+PLHLA
Sbjct: 37 NAQGASSLHLLAAQGSSEGLAVLLAHGADPNLRGARGRTPLHYVADGTNDDDDLDGAYAT-CASQLLDAGATVDARDAAGRTPLAVAVQAGRLSLVRVLLARGASLVADDAGNSPLHLA 154
BLAST of mRNA_H-paniculata_contig2133.5604.1 vs. uniprot
Match: A0A838VT47_9BACT (Ankyrin repeat domain-containing protein n=1 Tax=Candidatus Dependentiae bacterium TaxID=2030827 RepID=A0A838VT47_9BACT) HSP 1 Score: 50.8 bits (120), Expect = 5.690e-5 Identity = 23/44 (52.27%), Postives = 31/44 (70.45%), Query Frame = 1
Query: 4 NSAGKTPLHMVAAQHSLEGLLLLVADGADVNATDSYGRTPLHAA 135
NS G+TPLH + + + LL+A+GA+VNA D+YG TPLH A
Sbjct: 57 NSQGQTPLHSAIVSGNKDMIQLLMANGANVNAQDNYGNTPLHQA 100
BLAST of mRNA_H-paniculata_contig2133.5604.1 vs. uniprot
Match: A0A0A2VT67_BEABA (Protein phosphatase 1 regulatory subunit 12A n=1 Tax=Beauveria bassiana D1-5 TaxID=1245745 RepID=A0A0A2VT67_BEABA) HSP 1 Score: 50.8 bits (120), Expect = 7.450e-5 Identity = 28/67 (41.79%), Postives = 42/67 (62.69%), Query Frame = 1
Query: 7 SAGKTPLHMVAAQHSLEGLLLLVADGADVNATDSYGRTPLHAAC-----KNVERLVDNPSRRARECV 192
++G+T LHM AA+ E + LLV GADVNA D GRTPL A +NV+ L+ + + ++ +C+
Sbjct: 260 TSGETALHMAAAEQYPEMIRLLVTKGADVNAADVNGRTPLMEAAFWGRLENVQILLHHGADKSLQCI 326
BLAST of mRNA_H-paniculata_contig2133.5604.1 vs. uniprot
Match: A0A6J0V742_9SAUR (neurogenic locus notch homolog protein 4-like n=1 Tax=Pogona vitticeps TaxID=103695 RepID=A0A6J0V742_9SAUR) HSP 1 Score: 50.8 bits (120), Expect = 7.770e-5 Identity = 23/44 (52.27%), Postives = 30/44 (68.18%), Query Frame = 1
Query: 4 NSAGKTPLHMVAAQHSLEGLLLLVADGADVNATDSYGRTPLHAA 135
+S G+TPLH+ A + L+A GADVNA D +GRTPLH+A
Sbjct: 687 DSPGETPLHLAARYSRADAARRLLASGADVNALDQWGRTPLHSA 730
BLAST of mRNA_H-paniculata_contig2133.5604.1 vs. uniprot
Match: T0PV87_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0PV87_SAPDV) HSP 1 Score: 50.4 bits (119), Expect = 9.710e-5 Identity = 25/46 (54.35%), Postives = 32/46 (69.57%), Query Frame = 1
Query: 4 NSAGKTPLHMVAAQHSLEGLLLLVADGADVNATDSYGRTPLHAACK 141
++A KTPLH+ AA SL + LL+ GA+VNA D G TPLHAA +
Sbjct: 66 SNAKKTPLHLAAAARSLASVRLLLQFGANVNARDDNGCTPLHAAAR 111
BLAST of mRNA_H-paniculata_contig2133.5604.1 vs. uniprot
Match: A0A803TS46_ANOCA (Uncharacterized protein n=1 Tax=Anolis carolinensis TaxID=28377 RepID=A0A803TS46_ANOCA) HSP 1 Score: 49.7 bits (117), Expect = 9.860e-5 Identity = 22/44 (50.00%), Postives = 31/44 (70.45%), Query Frame = 1
Query: 4 NSAGKTPLHMVAAQHSLEGLLLLVADGADVNATDSYGRTPLHAA 135
+++G+TPLH+ A + L+A GADVNA D +GRTPLH+A
Sbjct: 55 HNSGETPLHLAARFSRADAARRLLASGADVNARDQWGRTPLHSA 98 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2133.5604.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2133.5604.1 >prot_H-paniculata_contig2133.5604.1 ID=prot_H-paniculata_contig2133.5604.1|Name=mRNA_H-paniculata_contig2133.5604.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=110bp MVAAQHSLEGLLLLVADGADVNATDSYGRTPLHAACKNVERLVDNPSRRAback to top mRNA from alignment at H-paniculata_contig2133:7882..8241+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2133.5604.1 ID=mRNA_H-paniculata_contig2133.5604.1|Name=mRNA_H-paniculata_contig2133.5604.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=360bp|location=Sequence derived from alignment at H-paniculata_contig2133:7882..8241+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2133:7882..8241+ >mRNA_H-paniculata_contig2133.5604.1 ID=mRNA_H-paniculata_contig2133.5604.1|Name=mRNA_H-paniculata_contig2133.5604.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=660bp|location=Sequence derived from alignment at H-paniculata_contig2133:7882..8241+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |