prot_H-paniculata_contig213.5591.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig213.5591.1
Unique Nameprot_H-paniculata_contig213.5591.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1812
Homology
BLAST of mRNA_H-paniculata_contig213.5591.1 vs. uniprot
Match: D8LMV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMV8_ECTSI)

HSP 1 Score: 914 bits (2361), Expect = 4.270e-299
Identity = 693/1718 (40.34%), Postives = 861/1718 (50.12%), Query Frame = 0
Query:    1 MACVELALLAA----PAVLNAVSSSRGGASRDDERTK-LIQLDCGAPLVVKYRFNYDTAMPQGDWLGVVPWGEEPTVGACVLKKLFPGTNAGTVRFEEGPSLPGKYAAHAFLRDSGDTVAGSTSLFECCMSFDETRVRQSRQGREFTLYLSTRWDMIMEREVFHVGAAPVLQQILDSRGVTFGCVDVRNDMLVEDLQTSVGLDAVLDGVKRARPYLVCCLGELNDVVLQSDSIDASILKEHPWLKVCLRRPHPPVAFGVAEREKSSI---------SMLTLTDVELLSAFLLPVLQETVQAETGFDRVTG--QPRLSGIPGGVNRHDGILTALGKFRKQASLND---DDGESEEKAGFCP-KSTAVSTGPLVRSPGLVMLDAVRQSRGSLTKYALFYTRAACLRSELHSSQKQEAGNITGVIRCINDSKRRMNQLKQELAASTNYFRQGYEDEAMLLRMFLEDLKRVFDEVYPVHSVPDRTDDASLRPHAFASHLLQRATVKLPSVRYRGFRLEP----------PTSSMPTTASTSQNAAIAVDSFKEESAAAWRFQQRRDFMPFEERIRRIS--------VIRKHSTWTGTMEAAVAAA-------GTITANGDHNNEEVMPADD-----------RGAADTNTRASPAKLFPVVLADYLGDTSTIGMAVVDQPGTGLTTALLSFLEWYCRGETAGGRRGVRVLEVMDSIPQCGRCYLSRSVLIRPRQIVRTLQDGKLSYEAVQRRTLVLRIDCRDPCHPRLDKAHLVHHVACEIIRTFGISCKLPDKPGLSS-----------------GSANGSDGD------------------------------------HRSHQTGSSVGG----------------DSVASAEPRAQGAXXXXXXAG---GLGDSNVCVGGLAVSGGKKGLANWTKVGPDYLWRWFDLLGRYGDLVLLIESPDALISSEERAAAIATAEIHPNPLSWLPPELPEHV--ITTCTQGSFCQQVLLRPGGWGWHTIRRKTGLDAETKGQVIDAVFRQHGVGCMLDWVESVLILKEKTTNMQYLVQVATAICEQGCLRCCTLAPGLL------QRHNKPHS----------STACAPSGGGNGLNGG------MDKTRLLELREATALLMREESALGVARFRIRRVVSMETVRARLLRAAICLVKLSRGGLSPYEIMRALCHLLTHQSQRRPDHHGI--ITRVGPSGAPTTTAIHMASAPITPGRSSPRHHXXXXXXXXXXXXXXXXXXXXKSPSLLGGGSEAEKDQIETAKMERVKSESMRYDTKIDAPTNTNGPTVAAATTSLTLPFKAASPTVSASQQRARGTKTTVKQ-------------------------------------------------------------------EEGREVANAGSDGPSRPAFSGQDWRLLEPELMPFCFKVLGRLVLCGNLIMTAVDHELINTQFYLQVLAESFAKDLPSARRGVEQLGALAGILKLSIQGGVEMPRKAATRQHRENLLNALADVELLRADPQSYLEYMHLAQVFATPSRFVAAVHASFERYYNVVSAEEL---------HATTKRPARAHHPLLYTIDSIRLKPPEAAALLKSRRQQHQQQP--------------------------QPQYISSAQKLTRAGPLRLLKAARLTLERLGETEKAMNLAESALALMF 1462
            MA V+L ++A     P      S+ + GA+  +  T   ++L CGAP  V YRFNY TA+P GDWLGV+ WG+EPT G C++++ F  +++GTV FEEGP LPGKYA HAFL +S + VAGST++FEC   F     R SR GREFTLYLSTRWDM++ER  F   AAP L+Q+LD+RGVTFG +D R+D+ VEDL T  G+DAVLDG++R  PY VCCLGELNDV L ++S++ASIL+ +PWLK  L    P +    ++REK  +         +MLT+TD+E+LS FLLPVLQET+QAE+G     G  + RL+ +PGG  RH  I+ AL  FR+  S  D    DG  EE AG    K  A   G                                C  + +H       G    +  C   S+R     K                          DL R  D +YP+H+ PDR D  SL PHA A +LL  A VKLP VRYRGFR EP          P  ++   AST+                AWR QQR +F+PFEER++R+S        +               AAA       G+    G   +    PA+                   T A  AK   VVLADYLGD +TIGM VVDQPGTGLTTALL FLEWYCRG+ AGGR+GV V+E +D IPQ GRC LSR+V+ RPR + R L DG L+ E V+RRTLV+R+DCRDPCH RLDKAHLV++++CEIIRTFG+  K+PDKPGLSS                 G+     GD                                    +  H  G  V G                D  A+ +P+ Q A      +G   G G   V        GGK+G    T++GP+ L RWFD+L  +GDLVL+IE+PDAL++ EERAAA  + E  PNPL+WLPPELP HV  ITTC+ GS CQQ+L    GWGWH +RRK GLDA+TKGQVIDAV R+HGVGCMLDWVES L+LKEKT N+Q+LV V  A+C  G L    L PGL        R   P S          S +C  +G G   +G       +    +  LR A A +M EESA+GVAR RIR++VS++  R  LLRAA+CLV+LS  GLS  E+  AL H+L     +R  HH     T V  S A + T                   XXXXXXXXXXXXXXXXXXXX         S  E    E A    V + + R      +P  T  P         T P   AS   +  +    G     ++                                                                   E G   ++  ++   RPAF  QDWR LEP+LM FC KVLGR VL   + +TAVD E + T+    VLA+SFAKDLP  RR  EQL ALA I+ LS  GGVE PR+A+ R HRE L  ALADVELL A   S                      ++FE YYNVVS + +         H   +  A A H LLYT+    LK P AA           +QP                                    LTRAG LRLL+AA+L LERLG+ E+ MNLAESA ALMF
Sbjct:    1 MARVDLKIVAGVSPPPTTATTASNLKLGATTSNSPTPGFLRLTCGAPFEVAYRFNYSTAVPTGDWLGVIAWGDEPTAGTCIVRRPFLESSSGTVFFEEGPPLPGKYAVHAFLTESNNAVAGSTAMFECISGFGAEEARCSRNGREFTLYLSTRWDMMLERAAFRDAAAPALKQMLDARGVTFGFIDARSDLDVEDLTTPRGVDAVLDGIRRCCPYFVCCLGELNDVELGAESVNASILQGNPWLKRVLLSDSPALT-NSSDREKKLVRAGRMRAAAAMLTVTDLEVLSGFLLPVLQETIQAESGSCTTAGVTRARLAAVPGGAARHSCIVNALADFRRLVSQQDREGGDGHDEEVAGDGNGKPVAADAGH------------------------------GCSEARIHD------GTRLLLHSCRVPSQRAPPYPKN-------------------------DLSRAIDRLYPMHTAPDRLDYVSLFPHASARNLLNAAVVKLPVVRYRGFRPEPSAVTGGVLASPGLAVSPAASTAXXXXXXXXXXXXXXXXAWRLQQRLEFIPFEERVKRMSGEAQGGGDISXXXXXXXXXXXXXTAAAVRVDLSLGSDGRRGTARSLGTTPAETGXXXXXXXXXXXXXXXXXTPAVAAKRLAVVLADYLGDKTTIGMVVVDQPGTGLTTALLGFLEWYCRGQVAGGRKGVTVVESLDRIPQYGRCNLSRAVISRPRLVSRNLNDGGLADETVERRTLVVRVDCRDPCHGRLDKAHLVNYLSCEIIRTFGMPYKMPDKPGLSSRYRIYNCRLDMFIFNLYGTYQWRRGDATNVGTLELRCRALWVERAAVRERTHWKELKPLALGNGGHHEGKKVHGIVSEQTSDNPREHNHDDDEAAVDPQDQLAADTAAPSGTKSGGGTMAVXXXXXXXKGGKEG--GRTEIGPEVLRRWFDVLRGHGDLVLVIENPDALVTPEERAAA--SPEQVPNPLAWLPPELPPHVKVITTCSTGSSCQQLLCGAEGWGWHMLRRKAGLDADTKGQVIDAVLRKHGVGCMLDWVESDLVLKEKTANIQFLVGVTEALCYSGKLARSGLPPGLHTAASAGSRPASPSSVSSAAACRSNSGSCTSAGKGENCDGXXXXXXXLSDADVASLRGAAASMMHEESAIGVARLRIRQLVSIKGHRGSLLRAALCLVRLSHAGLSVLELSAALRHILERYKSQRHQHHKPPPYTNVTASAAGSGTGXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAREPPAREAA----VATPTTRQSPASTSPQATGSPE--------TPPNPGASADTTKDRNNDSGLPDAPRKSVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGKGAAALGEHGLTSSSPRAERTQRPAFGQQDWRALEPDLMQFCHKVLGRFVLRDFVTVTAVDLECLETRDKFVVLADSFAKDLPGVRRAEEQLAALAAIVVLSTHGGVEAPRRAS-RPHREKLFTALADVELLYAMNGS---------------------KSTFEEYYNVVSHKAMGFHGRNHREHYQHQARAAATHDLLYTVHG--LKHPVAA-----------RQPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTRAGALRLLEAAKLVLERLGDAEETMNLAESAWALMF 1602          
BLAST of mRNA_H-paniculata_contig213.5591.1 vs. uniprot
Match: D8LMV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMV7_ECTSI)

HSP 1 Score: 238 bits (606), Expect = 2.940e-65
Identity = 161/345 (46.67%), Postives = 199/345 (57.68%), Query Frame = 0
Query: 1490 RLLAGIYVSLGSDMHLLLFHEDAQSGPPGEVTPHREVVDGADIEDMPRAAAPTPTLSHAHTNSLIGSKVGTVRSTISRVPSRI----------LDFPGSQGMSGTRQHSSQSGSAASGRSLRASSHTTPPFSNHASSESSRTTETSIGKTGRFATAGRVREFKMTLQAAAAHASKMKIAHAKRELNLEGLVRGYDVDAGVLNKSTNPGTQSKQQIGRVARAREAADKMLKRWPIIIERMGLCTEQAIKIRKLVRTKSTLP--GIGGSN----------SACQCDTRSSEELRVTREHARXXXXXXXILALSLRFERLALHIQRKQEDRELLRQAALGLGPPGITV 1812
            R+LAG+YVS G DMHLLLFHE AQ+    + +        A                            G+ RS  +   + +          L   G+ GM G R   +   +  SG  +R  + ++    +  SS   RT  T  GKTGRFATAGR+REF+  L+ AAAHASKMK AHA REL++EG VRG+DVDA VLNKSTNPG Q+KQQIGRVARAREA D ML RWP++IERMG+CTEQAIKIR LV+T  T P  G+   N          S+   DTR+ E  R  +EHAR       IL LS RFER+A  IQR+QE+RE  R AALGL PPG+++
Sbjct:   32 RILAGVYVSRGFDMHLLLFHEAAQTESRSDDSSSYS----AGXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTRSGNAGQENGVGGAGTQSKTELGVSGTTGM-GQRHSMAVEATGVSGLKVRCDASSSSLDGSGGSSR--RTAATVTGKTGRFATAGRLREFRAMLKGAAAHASKMKTAHANRELSIEGAVRGHDVDAAVLNKSTNPGRQTKQQIGRVARAREAVDGMLTRWPLVIERMGICTEQAIKIRNLVKTAGTFPTGGLAAENTEPAAATAAGSSSTNDTRACERRRAAKEHARVVEQHAEILTLSQRFERVASAIQRRQEEREYHRLAALGLVPPGVSI 369          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig213.5591.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMV8_ECTSI4.270e-29940.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LMV7_ECTSI2.940e-6546.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 405..425
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..1812
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.594

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig213contigH-paniculata_contig213:21686..44584 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig213.5591.1mRNA_H-paniculata_contig213.5591.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig213 15713..44584 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig213.5591.1 ID=prot_H-paniculata_contig213.5591.1|Name=mRNA_H-paniculata_contig213.5591.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1812bp
MACVELALLAAPAVLNAVSSSRGGASRDDERTKLIQLDCGAPLVVKYRFN
YDTAMPQGDWLGVVPWGEEPTVGACVLKKLFPGTNAGTVRFEEGPSLPGK
YAAHAFLRDSGDTVAGSTSLFECCMSFDETRVRQSRQGREFTLYLSTRWD
MIMEREVFHVGAAPVLQQILDSRGVTFGCVDVRNDMLVEDLQTSVGLDAV
LDGVKRARPYLVCCLGELNDVVLQSDSIDASILKEHPWLKVCLRRPHPPV
AFGVAEREKSSISMLTLTDVELLSAFLLPVLQETVQAETGFDRVTGQPRL
SGIPGGVNRHDGILTALGKFRKQASLNDDDGESEEKAGFCPKSTAVSTGP
LVRSPGLVMLDAVRQSRGSLTKYALFYTRAACLRSELHSSQKQEAGNITG
VIRCINDSKRRMNQLKQELAASTNYFRQGYEDEAMLLRMFLEDLKRVFDE
VYPVHSVPDRTDDASLRPHAFASHLLQRATVKLPSVRYRGFRLEPPTSSM
PTTASTSQNAAIAVDSFKEESAAAWRFQQRRDFMPFEERIRRISVIRKHS
TWTGTMEAAVAAAGTITANGDHNNEEVMPADDRGAADTNTRASPAKLFPV
VLADYLGDTSTIGMAVVDQPGTGLTTALLSFLEWYCRGETAGGRRGVRVL
EVMDSIPQCGRCYLSRSVLIRPRQIVRTLQDGKLSYEAVQRRTLVLRIDC
RDPCHPRLDKAHLVHHVACEIIRTFGISCKLPDKPGLSSGSANGSDGDHR
SHQTGSSVGGDSVASAEPRAQGAGATTGGAGGLGDSNVCVGGLAVSGGKK
GLANWTKVGPDYLWRWFDLLGRYGDLVLLIESPDALISSEERAAAIATAE
IHPNPLSWLPPELPEHVITTCTQGSFCQQVLLRPGGWGWHTIRRKTGLDA
ETKGQVIDAVFRQHGVGCMLDWVESVLILKEKTTNMQYLVQVATAICEQG
CLRCCTLAPGLLQRHNKPHSSTACAPSGGGNGLNGGMDKTRLLELREATA
LLMREESALGVARFRIRRVVSMETVRARLLRAAICLVKLSRGGLSPYEIM
RALCHLLTHQSQRRPDHHGIITRVGPSGAPTTTAIHMASAPITPGRSSPR
HHSSSPQASASPRGGSSTTTVLKSPSLLGGGSEAEKDQIETAKMERVKSE
SMRYDTKIDAPTNTNGPTVAAATTSLTLPFKAASPTVSASQQRARGTKTT
VKQEEGREVANAGSDGPSRPAFSGQDWRLLEPELMPFCFKVLGRLVLCGN
LIMTAVDHELINTQFYLQVLAESFAKDLPSARRGVEQLGALAGILKLSIQ
GGVEMPRKAATRQHRENLLNALADVELLRADPQSYLEYMHLAQVFATPSR
FVAAVHASFERYYNVVSAEELHATTKRPARAHHPLLYTIDSIRLKPPEAA
ALLKSRRQQHQQQPQPQYISSAQKLTRAGPLRLLKAARLTLERLGETEKA
MNLAESALALMFSVKDLTYEAFANVTEVSFAVDKIIDCLRLLAGIYVSLG
SDMHLLLFHEDAQSGPPGEVTPHREVVDGADIEDMPRAAAPTPTLSHAHT
NSLIGSKVGTVRSTISRVPSRILDFPGSQGMSGTRQHSSQSGSAASGRSL
RASSHTTPPFSNHASSESSRTTETSIGKTGRFATAGRVREFKMTLQAAAA
HASKMKIAHAKRELNLEGLVRGYDVDAGVLNKSTNPGTQSKQQIGRVARA
REAADKMLKRWPIIIERMGLCTEQAIKIRKLVRTKSTLPGIGGSNSACQC
DTRSSEELRVTREHARVVEQHAEILALSLRFERLALHIQRKQEDRELLRQ
AALGLGPPGITV
back to top