prot_H-paniculata_contig21280.5583.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig21280.5583.1
Unique Nameprot_H-paniculata_contig21280.5583.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length202
Homology
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BLAST of mRNA_H-paniculata_contig21280.5583.1 vs. uniprot
Match: D8LCR1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCR1_ECTSI)

HSP 1 Score: 122 bits (305), Expect = 1.670e-28
Identity = 75/141 (53.19%), Postives = 88/141 (62.41%), Query Frame = 0 
Query:   38 AWSAEAEAPLLWWWETDSEARTPWGVARLLGLLLRHMRQPERARSLLHAILLLALRSPSQLLRFPLAFLEAFPTCLEPPTPLPASHTAHASLPAARTPSLTVSRNSDDTSSASSQPPRVGAGMGLLAPGLWRRAVLTALFP 178
            AW AEAEA +LWWWETD EAR PW VARLLGLLLR + QP+R +++LH IL+ +L  P++L RFPLAFLEAFP  L     L +S TA A  PA          N            +V  G G+LAPGLWRRAV   LFP
Sbjct:  302 AWRAEAEATVLWWWETDEEARVPWAVARLLGLLLRRLDQPQRTQAVLHPILVRSLGGPARLRRFPLAFLEAFPGLL-----LRSSPTA-AGAPA----------NGRYWGGQEEDGAKVERGDGVLAPGLWRRAVAAVLFP 426
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BLAST of mRNA_H-paniculata_contig21280.5583.1 vs. uniprot
Match: A0A6H5LB44_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB44_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 7.600e-28
Identity = 74/148 (50.00%), Postives = 90/148 (60.81%), Query Frame = 0 
Query:   31 GDRGSSQAWSAEAEAPLLWWWETDSEARTPWGVARLLGLLLRHMRQPERARSLLHAILLLALRSPSQLLRFPLAFLEAFPTCLEPPTPLPASHTAHASLPAARTPSLTVSRNSDDTSSASSQPPRVGAGMGLLAPGLWRRAVLTALFP 178
            G+     AW AEAEA +LWWWETD EAR PW VARLLGLLLR + Q +R +++LH IL+ +L  P++L RFPLAFLEAFP  L     L +  TA  +L   R       R   +   A     +V  G G+LAPGLWRRAV   LFP
Sbjct:  675 GEEEGGDAWRAEAEATVLWWWETDEEARVPWAVARLLGLLLRRLDQLQRTQAVLHPILVRSLGGPARLRRFPLAFLEAFPGLL-----LRSPLTAAGALANGR------HREGQEEDGA-----KVDQGDGVLAPGLWRRAVAAVLFP 806
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21280.5583.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCR1_ECTSI1.670e-2853.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LB44_9PHAE7.600e-2850.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21280contigH-paniculata_contig21280:200..2857 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21280.5583.1mRNA_H-paniculata_contig21280.5583.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig21280 200..2857 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig21280.5583.1 ID=prot_H-paniculata_contig21280.5583.1|Name=mRNA_H-paniculata_contig21280.5583.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=202bp
FGNSKKRKAQKAQKAKAAAAQSKDPSSQRQGDRGSSQAWSAEAEAPLLWW
WETDSEARTPWGVARLLGLLLRHMRQPERARSLLHAILLLALRSPSQLLR
FPLAFLEAFPTCLEPPTPLPASHTAHASLPAARTPSLTVSRNSDDTSSAS
SQPPRVGAGMGLLAPGLWRRAVLTALFPAGNIIAGGGGGGEGGGEVGGGR
GG
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