prot_H-paniculata_contig2126.5572.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2126.5572.1
Unique Nameprot_H-paniculata_contig2126.5572.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length314
Homology
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BLAST of mRNA_H-paniculata_contig2126.5572.1 vs. uniprot
Match: D7FNX6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNX6_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 1.390e-52
Identity = 105/209 (50.24%), Postives = 132/209 (63.16%), Query Frame = 0 
Query:   12 VQARVTEMLELLKARAPNLRPNVTPRPFKHAVSSNLLTLCQTAEHRAAVQAFLVKRLGTEHEDVQLADGGRAGGASSRQ------GEGVRGHIVLDTEVDVSARIFRITGAKLSGEIDAALHDLEWLMELQLKSSREEFEPYVSHFAAANELGSDVAAAPALQEVCGLAYALQVATSHMPGWTGYVGSLQLPIPTDANITELLQELFEP 214
            VQ RV E+  LLK +AP+L P+V PRP+KHA ++N++TLC T   RA  +AFL  +  +   D   A G R  G   +Q       EG R H+VL+TE D++ R FRIT AKL G IDA L DL  LM+L L + R+E EPYV  FAAANEL    AA  AL   C LAYALQVATS + GW G+VGS  LP+  D ++T ++ ELF P
Sbjct:   13 VQDRVMEIAALLKKKAPHLAPSVIPRPYKHA-AANIVTLCSTPRQRADAEAFLASKAESATVDDVAAAGERGRGEEGQQIESEDAAEGGRHHVVLETETDIATRTFRITAAKLGGRIDATLSDLNLLMDLHLNAPRQELEPYVERFAAANELDPSTAAL-ALHGACSLAYALQVATSSIAGWNGFVGSHPLPLAGDVDMTVVMNELFRP 219
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BLAST of mRNA_H-paniculata_contig2126.5572.1 vs. uniprot
Match: A0A835Z461_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z461_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 2.550e-10
Identity = 49/174 (28.16%), Postives = 82/174 (47.13%), Query Frame = 0 
Query:   68 LGTEHEDVQLADGGRAGGASSRQGEGVRG-----HIVLDTEVDVSARIFRITGAKLSGEIDAALHDLEWLMELQLKSSR------------------------EEFEPYVSHFAAANELGSDVAAAPALQEVCGLAYALQVATSHMPGWTGYVGSLQLPIPTDANITELLQELF 212
            +G    D Q A   R  G+  R  E  +       IVLDTE+D+  R F++  A+++   +A L  ++ ++ELQL+++                         +  +     F + N L + +A A  +QEV  L YA++VA S++PGW G V    LP+P   ++  +L +LF
Sbjct:    1 MGLASTDAQKAQAMRFIGSRKRAAETGKQPIADPEIVLDTELDLQKRTFKVVRARVASASEATLASIDSVLELQLEAAAPPLQAVDDAQQAGEPAADPTEAAADRLQALCGTFVSLNSLPAGLAGAAVMQEVYSLGYAVRVAASNIPGWKGTVAGRPLPLPATEDLLAVLGDLF 174
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2126.5572.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNX6_ECTSI1.390e-5250.24Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z461_9STRA2.550e-1028.16Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2126contigH-paniculata_contig2126:7977..12551 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2126.5572.1mRNA_H-paniculata_contig2126.5572.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2126 7747..12797 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2126.5572.1 ID=prot_H-paniculata_contig2126.5572.1|Name=mRNA_H-paniculata_contig2126.5572.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=314bp
MANAPGASANAVQARVTEMLELLKARAPNLRPNVTPRPFKHAVSSNLLTL
CQTAEHRAAVQAFLVKRLGTEHEDVQLADGGRAGGASSRQGEGVRGHIVL
DTEVDVSARIFRITGAKLSGEIDAALHDLEWLMELQLKSSREEFEPYVSH
FAAANELGSDVAAAPALQEVCGLAYALQVATSHMPGWTGYVGSLQLPIPT
DANITELLQELFEPLLPLIPPSPEQKKQSPGKKGGSGKRPKSKSKDSKKD
DKRKENSAAISPGASGEGLTPATGKKGAGAKMSVGVGSSSSSKQDGVKGE
TSPKSTPKRKKKR*
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