prot_H-paniculata_contig2122.5565.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2122.5565.1
Unique Nameprot_H-paniculata_contig2122.5565.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length175
Homology
BLAST of mRNA_H-paniculata_contig2122.5565.1 vs. uniprot
Match: D7G5Q7_ECTSI (Tha4/Hcf106 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5Q7_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 7.830e-42
Identity = 100/175 (57.14%), Postives = 120/175 (68.57%), Query Frame = 0
Query:    1 MKLASCIIVCACALVSRTVEAFVPAGLPRSFAGTASARRAVASSPTDSSRQHGFISQASAFAGSPVATIATSPCSRYVSGPPC----TTTMGLFGLGAPEIAVCLAVAALILGPDKLAGVAKDVGKMAGELKDVPAEFQAGIEEGEAALQQTKALKSKPGEAVMDAEEVAEKETE 171
            MKLA C++V ACAL +R  EAFVPA   R+   +A+ R+A + SP  + RQ+ F   +    GSP    A +  SR++SG P     TTTMGLFGLGAPEIAVC+AVAALILGPDK+AG AKD+GKMAGELKDVP EFQAG+EEGEA  Q+T       G AV DAE   +KE E
Sbjct:    1 MKLACCVLVWACALAARVAEAFVPALAGRAGIMSAAGRQA-SMSPAAAGRQNAFSHTSY---GSP----AQAQSSRWLSGRPSSGASTTTMGLFGLGAPEIAVCIAVAALILGPDKMAGFAKDMGKMAGELKDVPKEFQAGVEEGEAKTQKTIREIESNGLAVEDAEPATKKEEE 167          
BLAST of mRNA_H-paniculata_contig2122.5565.1 vs. uniprot
Match: A0A835YSI8_9STRA (Tha4/Hcf106 protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSI8_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 4.750e-21
Identity = 71/144 (49.31%), Postives = 85/144 (59.03%), Query Frame = 0
Query:   18 TVEAFV-PAGLPRSFAGTASARRAVASSPTDSSRQHGFISQASAFAGSPVATIATSPCSRYVSGPPCTTTMGLFGLGAPEIAVCLAVAALILGPDKLAGVAKDVGKMAGELKDVPAEFQAGIEEGEAAL--QQTKALKSKPGEA 158
            T +AFV P   P +   T S+  AV S      R   F     A A S  A + T P    VS       MGLFGLGAPEIAV + VAAL+LGP+KL   AKD GKMAGELK+VP EFQAGI+EGEA++  Q  KA + +P +A
Sbjct:   16 TAQAFVLPVSAPLTACTTCSSSMAVGS------RMSAF-----ALAPSSHARLTTRPSRASVS-------MGLFGLGAPEIAVIIVVAALVLGPEKLTSFAKDAGKMAGELKEVPKEFQAGIDEGEASMKTQMKKAKQLEPQDA 141          
BLAST of mRNA_H-paniculata_contig2122.5565.1 vs. uniprot
Match: A0A6V1V9D4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1V9D4_HETAK)

HSP 1 Score: 89.7 bits (221), Expect = 1.260e-19
Identity = 57/84 (67.86%), Postives = 65/84 (77.38%), Query Frame = 0
Query:   87 MGLFGLGAPEIAVCLAVAALILGPDKLAGVAKDVGKMAGELKDVPAEFQAGIEEG-EAALQQTK-ALKSKPGEAVMDAEEVAEK 168
            M LFGL APE+ VCLAVAALILGPDKL G AKD+GK+AGELK+VP EFQAG+EEG E A+Q+ K  +KS    AV DAE   EK
Sbjct:   71 MQLFGLSAPELLVCLAVAALILGPDKLIGSAKDLGKIAGELKEVPKEFQAGMEEGKEKAIQEQKEGMKSG---AVQDAETSGEK 151          
BLAST of mRNA_H-paniculata_contig2122.5565.1 vs. uniprot
Match: A0A7S2XUZ2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUZ2_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 2.260e-19
Identity = 45/58 (77.59%), Postives = 51/58 (87.93%), Query Frame = 0
Query:   87 MGLFGLGAPEIAVCLAVAALILGPDKLAGVAKDVGKMAGELKDVPAEFQAGIEEGEAA 144
            MGLFGLGAPEIAVC+ VAAL+LGPDKL   A+DVGKMAGELK+VP EFQ G+EEG+ A
Sbjct:   67 MGLFGLGAPEIAVCVIVAALVLGPDKLISSARDVGKMAGELKEVPKEFQKGLEEGKEA 124          
BLAST of mRNA_H-paniculata_contig2122.5565.1 vs. uniprot
Match: A0A7S4A8R7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A8R7_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 1.560e-18
Identity = 50/85 (58.82%), Postives = 61/85 (71.76%), Query Frame = 0
Query:   86 TMGLFGLGAPEIAVCLAVAALILGPDKLAGVAKDVGKMAGELKDVPAEFQAGIEEGEAALQQTKALKSKPGEAVMDAEEVAEKET 170
            TMGLFGLGAPE+ + L  AA +LGPDKLA + KD GK+AGELK+VP EFQAG+ EGEA+    KA+K K      +A  + EKET
Sbjct:   63 TMGLFGLGAPEVGIILVAAAFLLGPDKLASLGKDAGKIAGELKEVPKEFQAGLAEGEASA---KAMKDKQE---AEAAVIVEKET 141          
BLAST of mRNA_H-paniculata_contig2122.5565.1 vs. uniprot
Match: A0A448ZFG6_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZFG6_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 2.870e-18
Identity = 46/69 (66.67%), Postives = 54/69 (78.26%), Query Frame = 0
Query:   86 TMGLFGLGAPEIAVCLAVAALILGPDKLAGVAKDVGKMAGELKDVPAEFQAGIEEGEAALQQTKALKSK 154
            TMGLFGLGAPEI + L  AA +LGPDKLA + KD GK+AGELK+VP EFQAG+ EGEA+    KA+K K
Sbjct:   60 TMGLFGLGAPEIGIVLVAAAFLLGPDKLASLGKDAGKIAGELKEVPKEFQAGMAEGEASA---KAMKEK 125          
BLAST of mRNA_H-paniculata_contig2122.5565.1 vs. uniprot
Match: A0A7S2K8J1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K8J1_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 8.080e-18
Identity = 49/81 (60.49%), Postives = 58/81 (71.60%), Query Frame = 0
Query:   84 TTTMGLFGLGAPEIAVCLAVAALILGPDKLAGVAKDVGKMAGELKDVPAEFQAGIEEGEAALQQTKALKSKPGEAVMDAEE 164
            T   GLFGLG PEIA+ L  AA +LGP+KLA + KD GKMAGELK+VP EFQAGIEEGE   +  KA+K+K    V + EE
Sbjct:   87 TQLHGLFGLGGPEIAIILVAAAFLLGPEKLAELGKDAGKMAGELKEVPKEFQAGIEEGE---KNAKAMKAKTTAPVEEQEE 164          
BLAST of mRNA_H-paniculata_contig2122.5565.1 vs. uniprot
Match: A0A7S2SMJ0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SMJ0_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 8.120e-18
Identity = 51/91 (56.04%), Postives = 62/91 (68.13%), Query Frame = 0
Query:   62 AGSPVATIATSPCSRYVSGPPCTTTMGLFGLGAPEIAVCLAVAALILGPDKLAGVAKDVGKMAGELKDVPAEFQAGIEEGEAALQQTKALK 152
            AG P   +A +P    V       TMGLFGLGAPEIAV + VA  +LGP KLA +A+D+GK+AGELKDVP EFQ G+ EGE   ++ KALK
Sbjct:   80 AGMPANAVAGAPARSQV------VTMGLFGLGAPEIAVIVGVAGFVLGPQKLAEMARDMGKVAGELKDVPREFQEGLSEGE---KEAKALK 161          
BLAST of mRNA_H-paniculata_contig2122.5565.1 vs. uniprot
Match: A0A1E7F4Y7_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F4Y7_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 6.790e-17
Identity = 41/58 (70.69%), Postives = 47/58 (81.03%), Query Frame = 0
Query:   86 TMGLFGLGAPEIAVCLAVAALILGPDKLAGVAKDVGKMAGELKDVPAEFQAGIEEGEA 143
            TMGLFGLGAPE+ + L  AA +LGPDKLA   KD GK+AGELK+VP EFQAG+ EGEA
Sbjct:   62 TMGLFGLGAPEVGIILVAAAFLLGPDKLAEFGKDAGKIAGELKEVPKEFQAGMAEGEA 119          
BLAST of mRNA_H-paniculata_contig2122.5565.1 vs. uniprot
Match: A0A7S2VF94_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VF94_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 1.080e-16
Identity = 44/68 (64.71%), Postives = 51/68 (75.00%), Query Frame = 0
Query:   86 TMGLFGLGAPEIAVCLAVAALILGPDKLAGVAKDVGKMAGELKDVPAEFQAGIEEGEAALQQTKALKS 153
            TMGLFGLG PEI V L  AA +LGP KLA + KD GK+AGELK+VP EFQ G+EEGEA   Q K +K+
Sbjct:   61 TMGLFGLGVPEIGVILVAAAFVLGPQKLAELGKDAGKIAGELKEVPKEFQKGLEEGEA---QAKVIKA 125          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2122.5565.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5Q7_ECTSI7.830e-4257.14Tha4/Hcf106 protein n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A835YSI8_9STRA4.750e-2149.31Tha4/Hcf106 protein n=1 Tax=Tribonema minus TaxID=... [more]
A0A6V1V9D4_HETAK1.260e-1967.86Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XUZ2_9STRA2.260e-1977.59Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4A8R7_9STRA1.560e-1858.82Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A448ZFG6_9STRA2.870e-1866.67Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2K8J1_9STRA8.080e-1860.49Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2SMJ0_9STRA8.120e-1856.04Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1E7F4Y7_9STRA6.790e-1770.69Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S2VF94_9STRA1.080e-1664.71Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003369Sec-independent protein translocase protein TatA/B/EPFAMPF02416MttA_Hcf106coord: 92..126
e-value: 4.0E-6
score: 26.0
NoneNo IPR availablePANTHERPTHR33162FAMILY NOT NAMEDcoord: 34..162
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..174
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.707

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2122contigH-paniculata_contig2122:15142..20650 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2122.5565.1mRNA_H-paniculata_contig2122.5565.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2122 13464..21541 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2122.5565.1 ID=prot_H-paniculata_contig2122.5565.1|Name=mRNA_H-paniculata_contig2122.5565.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=175bp
MKLASCIIVCACALVSRTVEAFVPAGLPRSFAGTASARRAVASSPTDSSR
QHGFISQASAFAGSPVATIATSPCSRYVSGPPCTTTMGLFGLGAPEIAVC
LAVAALILGPDKLAGVAKDVGKMAGELKDVPAEFQAGIEEGEAALQQTKA
LKSKPGEAVMDAEEVAEKETEAAT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003369TatA/B/E