mRNA_H-paniculata_contig2122.5565.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2122.5565.1
Unique NamemRNA_H-paniculata_contig2122.5565.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig2122.5565.1 vs. uniprot
Match: D7G5Q7_ECTSI (Tha4/Hcf106 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5Q7_ECTSI)

HSP 1 Score: 149 bits (376), Expect = 5.100e-39
Identity = 100/175 (57.14%), Postives = 120/175 (68.57%), Query Frame = 2 
Query:  122 MKLASCIIVCACALVSRTVEAFVPAGLPRSFAGTASARRAVASSPTDSSRQHGFISQASAFAGSPVATIATSPCSRYVSGPPC----TTTMGLFGLGAPEIAVCLAVAALILGPDKLAGVAKDVGKMAGELKDVPAEFQAGIEEGEAALQQTKALKSKPGEAVMDAEEVAEKETE 634
            MKLA C++V ACAL +R  EAFVPA   R+   +A+ R+A + SP  + RQ+ F   +    GSP    A +  SR++SG P     TTTMGLFGLGAPEIAVC+AVAALILGPDK+AG AKD+GKMAGELKDVP EFQAG+EEGEA  Q+T       G AV DAE   +KE E
Sbjct:    1 MKLACCVLVWACALAARVAEAFVPALAGRAGIMSAAGRQA-SMSPAAAGRQNAFSHTSY---GSP----AQAQSSRWLSGRPSSGASTTTMGLFGLGAPEIAVCIAVAALILGPDKMAGFAKDMGKMAGELKDVPKEFQAGVEEGEAKTQKTIREIESNGLAVEDAEPATKKEEE 167
[Close]
BLAST of mRNA_H-paniculata_contig2122.5565.1 vs. uniprot
Match: A0A835YSI8_9STRA (Tha4/Hcf106 protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSI8_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 2.350e-19
Identity = 73/159 (45.91%), Postives = 90/159 (56.60%), Query Frame = 2 
Query:  128 LASCIIVCACALVSRTVEAFV-PAGLPRSFAGTASARRAVASSPTDSSRQHGFISQASAFAGSPVATIATSPCSRYVSGPPCTTTMGLFGLGAPEIAVCLAVAALILGPDKLAGVAKDVGKMAGELKDVPAEFQAGIEEGEAAL--QQTKALKSKPGEA 595
            + +C    A    + T +AFV P   P +   T S+  AV S      R   F     A A S  A + T P    VS       MGLFGLGAPEIAV + VAAL+LGP+KL   AKD GKMAGELK+VP EFQAGI+EGEA++  Q  KA + +P +A
Sbjct:    1 MKACAAAVAALAAAGTAQAFVLPVSAPLTACTTCSSSMAVGS------RMSAF-----ALAPSSHARLTTRPSRASVS-------MGLFGLGAPEIAVIIVVAALVLGPEKLTSFAKDAGKMAGELKEVPKEFQAGIDEGEASMKTQMKKAKQLEPQDA 141
[Close]
BLAST of mRNA_H-paniculata_contig2122.5565.1 vs. uniprot
Match: A0A6V1V9D4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1V9D4_HETAK)

HSP 1 Score: 90.5 bits (223), Expect = 8.900e-18
Identity = 57/84 (67.86%), Postives = 65/84 (77.38%), Query Frame = 2 
Query:  380 MGLFGLGAPEIAVCLAVAALILGPDKLAGVAKDVGKMAGELKDVPAEFQAGIEEG-EAALQQTK-ALKSKPGEAVMDAEEVAEK 625
            M LFGL APE+ VCLAVAALILGPDKL G AKD+GK+AGELK+VP EFQAG+EEG E A+Q+ K  +KS    AV DAE   EK
Sbjct:   71 MQLFGLSAPELLVCLAVAALILGPDKLIGSAKDLGKIAGELKEVPKEFQAGMEEGKEKAIQEQKEGMKSG---AVQDAETSGEK 151
[Close]
BLAST of mRNA_H-paniculata_contig2122.5565.1 vs. uniprot
Match: A0A7S2XUZ2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUZ2_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 2.800e-17
Identity = 45/58 (77.59%), Postives = 51/58 (87.93%), Query Frame = 2 
Query:  380 MGLFGLGAPEIAVCLAVAALILGPDKLAGVAKDVGKMAGELKDVPAEFQAGIEEGEAA 553
            MGLFGLGAPEIAVC+ VAAL+LGPDKL   A+DVGKMAGELK+VP EFQ G+EEG+ A
Sbjct:   67 MGLFGLGAPEIAVCVIVAALVLGPDKLISSARDVGKMAGELKEVPKEFQKGLEEGKEA 124
[Close]
BLAST of mRNA_H-paniculata_contig2122.5565.1 vs. uniprot
Match: A0A7S4A8R7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A8R7_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 8.550e-17
Identity = 50/85 (58.82%), Postives = 61/85 (71.76%), Query Frame = 2 
Query:  377 TMGLFGLGAPEIAVCLAVAALILGPDKLAGVAKDVGKMAGELKDVPAEFQAGIEEGEAALQQTKALKSKPGEAVMDAEEVAEKET 631
            TMGLFGLGAPE+ + L  AA +LGPDKLA + KD GK+AGELK+VP EFQAG+ EGEA+    KA+K K      +A  + EKET
Sbjct:   63 TMGLFGLGAPEVGIILVAAAFLLGPDKLASLGKDAGKIAGELKEVPKEFQAGLAEGEASA---KAMKDKQE---AEAAVIVEKET 141
[Close]
BLAST of mRNA_H-paniculata_contig2122.5565.1 vs. uniprot
Match: A0A448ZFG6_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZFG6_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 2.750e-16
Identity = 46/69 (66.67%), Postives = 54/69 (78.26%), Query Frame = 2 
Query:  377 TMGLFGLGAPEIAVCLAVAALILGPDKLAGVAKDVGKMAGELKDVPAEFQAGIEEGEAALQQTKALKSK 583
            TMGLFGLGAPEI + L  AA +LGPDKLA + KD GK+AGELK+VP EFQAG+ EGEA+    KA+K K
Sbjct:   60 TMGLFGLGAPEIGIVLVAAAFLLGPDKLASLGKDAGKIAGELKEVPKEFQAGMAEGEASA---KAMKEK 125
[Close]
BLAST of mRNA_H-paniculata_contig2122.5565.1 vs. uniprot
Match: A0A7S2SMJ0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SMJ0_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 5.900e-16
Identity = 64/157 (40.76%), Postives = 84/157 (53.50%), Query Frame = 2 
Query:  110 QSRIMKLASCIIVCACALVSRTVEAFVPAGLPRSFAGTASARRAVASSPTDSSRQHG-FISQASAFAGSPVATIATSPCSRYVSGPPCTTTMGLFGLGAPEIAVCLAVAALILGPDKLAGVAKDVGKMAGELKDVPAEFQAGIEEGEAALQQTKALK 577
            + R M+    ++     +++    AF PA   RS            S P  +    G F+S     AG P   +A +P    V       TMGLFGLGAPEIAV + VA  +LGP KLA +A+D+GK+AGELKDVP EFQ G+ EGE   ++ KALK
Sbjct:   28 ERRAMRAMGILLAVVLGMITLPASAFAPASFARSLHH---------SRPLPAPTGPGAFLS-----AGMPANAVAGAPARSQV------VTMGLFGLGAPEIAVIVGVAGFVLGPQKLAEMARDMGKVAGELKDVPREFQEGLSEGE---KEAKALK 161
[Close]
BLAST of mRNA_H-paniculata_contig2122.5565.1 vs. uniprot
Match: A0A7S2K8J1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K8J1_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 7.660e-16
Identity = 49/81 (60.49%), Postives = 58/81 (71.60%), Query Frame = 2 
Query:  371 TTTMGLFGLGAPEIAVCLAVAALILGPDKLAGVAKDVGKMAGELKDVPAEFQAGIEEGEAALQQTKALKSKPGEAVMDAEE 613
            T   GLFGLG PEIA+ L  AA +LGP+KLA + KD GKMAGELK+VP EFQAGIEEGE   +  KA+K+K    V + EE
Sbjct:   87 TQLHGLFGLGGPEIAIILVAAAFLLGPEKLAELGKDAGKMAGELKEVPKEFQAGIEEGE---KNAKAMKAKTTAPVEEQEE 164
[Close]
BLAST of mRNA_H-paniculata_contig2122.5565.1 vs. uniprot
Match: A0A1E7F4Y7_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F4Y7_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 4.920e-15
Identity = 41/58 (70.69%), Postives = 47/58 (81.03%), Query Frame = 2 
Query:  377 TMGLFGLGAPEIAVCLAVAALILGPDKLAGVAKDVGKMAGELKDVPAEFQAGIEEGEA 550
            TMGLFGLGAPE+ + L  AA +LGPDKLA   KD GK+AGELK+VP EFQAG+ EGEA
Sbjct:   62 TMGLFGLGAPEVGIILVAAAFLLGPDKLAEFGKDAGKIAGELKEVPKEFQAGMAEGEA 119
[Close]
BLAST of mRNA_H-paniculata_contig2122.5565.1 vs. uniprot
Match: A0A7S2VF94_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VF94_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 7.250e-15
Identity = 44/68 (64.71%), Postives = 51/68 (75.00%), Query Frame = 2 
Query:  377 TMGLFGLGAPEIAVCLAVAALILGPDKLAGVAKDVGKMAGELKDVPAEFQAGIEEGEAALQQTKALKS 580
            TMGLFGLG PEI V L  AA +LGP KLA + KD GK+AGELK+VP EFQ G+EEGEA   Q K +K+
Sbjct:   61 TMGLFGLGVPEIGVILVAAAFVLGPQKLAELGKDAGKIAGELKEVPKEFQKGLEEGEA---QAKVIKA 125
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2122.5565.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5Q7_ECTSI5.100e-3957.14Tha4/Hcf106 protein n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A835YSI8_9STRA2.350e-1945.91Tha4/Hcf106 protein n=1 Tax=Tribonema minus TaxID=... [more]
A0A6V1V9D4_HETAK8.900e-1867.86Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XUZ2_9STRA2.800e-1777.59Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4A8R7_9STRA8.550e-1758.82Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A448ZFG6_9STRA2.750e-1666.67Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2SMJ0_9STRA5.900e-1640.76Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2K8J1_9STRA7.660e-1660.49Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A1E7F4Y7_9STRA4.920e-1570.69Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S2VF94_9STRA7.250e-1564.71Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2122contigH-paniculata_contig2122:13464..21541 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score80.1
Seed ortholog evalue1.1e-12
Seed eggNOG ortholog2850.Phatr52200
KEGG koko:K03116
KEGG TC2.A.64
KEGG Pathwayko03060,ko03070,map03060,map03070
KEGG ModuleM00336
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.mttA/Hcf106 family
EggNOG OGs29P47@1,2RWFK@2759,2XDQB@2836
Ec32 ortholog descriptionTha4/Hcf106 protein
Ec32 orthologEc-12_008760.1
COG Functional cat.U
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko02044
Exons5
Model size1537
Cds size525
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929565.8158305-UTR-H-paniculata_contig2122:13463..135221622929565.8158305-UTR-H-paniculata_contig2122:13463..13522Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2122 13464..13522 +
1691480916.6664162-UTR-H-paniculata_contig2122:13463..135221691480916.6664162-UTR-H-paniculata_contig2122:13463..13522Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2122 13464..13522 +
1622929565.827596-UTR-H-paniculata_contig2122:15079..151411622929565.827596-UTR-H-paniculata_contig2122:15079..15141Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2122 15080..15141 +
1691480916.677726-UTR-H-paniculata_contig2122:15079..151411691480916.677726-UTR-H-paniculata_contig2122:15079..15141Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2122 15080..15141 +
1622929565.8915274-UTR-H-paniculata_contig2122:20650..215411622929565.8915274-UTR-H-paniculata_contig2122:20650..21541Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2122 20651..21541 +
1691480916.7237659-UTR-H-paniculata_contig2122:20650..215411691480916.7237659-UTR-H-paniculata_contig2122:20650..21541Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2122 20651..21541 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929565.8399975-CDS-H-paniculata_contig2122:15141..152901622929565.8399975-CDS-H-paniculata_contig2122:15141..15290Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2122 15142..15290 +
1691480916.6851497-CDS-H-paniculata_contig2122:15141..152901691480916.6851497-CDS-H-paniculata_contig2122:15141..15290Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2122 15142..15290 +
1622929565.8568468-CDS-H-paniculata_contig2122:17045..172391622929565.8568468-CDS-H-paniculata_contig2122:17045..17239Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2122 17046..17239 +
1691480916.6925716-CDS-H-paniculata_contig2122:17045..172391691480916.6925716-CDS-H-paniculata_contig2122:17045..17239Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2122 17046..17239 +
1622929565.8701723-CDS-H-paniculata_contig2122:18387..184491622929565.8701723-CDS-H-paniculata_contig2122:18387..18449Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2122 18388..18449 +
1691480916.703437-CDS-H-paniculata_contig2122:18387..184491691480916.703437-CDS-H-paniculata_contig2122:18387..18449Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2122 18388..18449 +
1622929565.8812895-CDS-H-paniculata_contig2122:20530..206501622929565.8812895-CDS-H-paniculata_contig2122:20530..20650Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2122 20531..20650 +
1691480916.7135854-CDS-H-paniculata_contig2122:20530..206501691480916.7135854-CDS-H-paniculata_contig2122:20530..20650Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2122 20531..20650 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2122.5565.1prot_H-paniculata_contig2122.5565.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2122 15142..20650 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2122.5565.1

>prot_H-paniculata_contig2122.5565.1 ID=prot_H-paniculata_contig2122.5565.1|Name=mRNA_H-paniculata_contig2122.5565.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=175bp
MKLASCIIVCACALVSRTVEAFVPAGLPRSFAGTASARRAVASSPTDSSR
QHGFISQASAFAGSPVATIATSPCSRYVSGPPCTTTMGLFGLGAPEIAVC
LAVAALILGPDKLAGVAKDVGKMAGELKDVPAEFQAGIEEGEAALQQTKA
LKSKPGEAVMDAEEVAEKETEAAT*
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mRNA from alignment at H-paniculata_contig2122:13464..21541+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2122.5565.1 ID=mRNA_H-paniculata_contig2122.5565.1|Name=mRNA_H-paniculata_contig2122.5565.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8078bp|location=Sequence derived from alignment at H-paniculata_contig2122:13464..21541+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACCCCTGCGTGCTTGCTTGCTGTGCTCTGAATGCTCTGCAGGGAACTGGT
TTCTTTAAGGTAGGCGAATGGCGGGTTGGTGATAGATGACGGAGTCCAAG
TCTTGATATTAAAGCTATCGTTGGATGGAGAGGAGGGTTAGCCCCCACTC
GCGCTGCATGTGCATATTGTGATGGGTGCTCTGTGGTAGAGATACAAAGT
CGCTTCTTGTCAAATTGTCTCGAGGTGGGTCGTATATACGATAACGTTTA
ATGGGAAAATGTTGGTGGGCGTGGGAGGCAGCCGTCAAGGCAGCTAGCTG
GCCATCATGTTACAACAACATGAGGGTGCAACCTTGAAGAGGCCGTAATG
TACTACCTTACTCGAGGAATCAATTAGTCACTCGAGACATATTGTGGGGT
TATCTAAGCGCCTACCACAACCACATCCCTCGATGATCGGAAAGCTGCCT
CTGCCCTGCTGCCAGGCCATTGTGGGTGGAGGGTAACTAACACTACGCAT
GTGTTACCACCCTGATGTCTGTATTGATTCTATTGTACGACTGTTGTCTT
TTAGCTGGGCAAAAAGAACAGGCTTAATAAGTTGAAGGTGGTATCTCTAT
AGGAGCAATATGTCGCGATGTGCTGGCTGTCCTCCTGAAGAACGACGATG
AGAAATATACTTTGTAGAGAAGGGGCCCGACAGGAGACAGGAAGAAGATA
TCTGATCTGCACACGGTGCTTGTCTTTCTTGTATGTTAACCTCCCACAGA
ACAGGACGCCGCTACATGAACGATGTATATTTCAAGCTTGCAGTATTCTT
TTGTTCTAATTCTAGATACAGCAGTAAACGAAAAAGACCTACTGAAAATA
TATCCGTTTGGAGGCGAATGTGTGCTAGCGTGCTAGCCGCTCGTTGCGGC
ATGGGGATAAGCCTGTTTGCCATACTGTATACGAAACACACAATCGTGCT
GTTGCTCCGTGATCATGGTCCAGACATGTCTTATCGCTTAGCCTACGGGC
ATGGTGTGCGTGCTGTGTGTGGAAAACCCGTCCGTCTTTGAAATGAACAC
ATGGTATCATGATAGAAATGAGATTTTTACCTTTACCTTGGACTTCGAAC
AGAAAAATTGTGGACCCTTGAACCGAATTCGGTCGTACATATTACATGAT
GTTAGGTCTAAATATCAACCGCCGTGATACAGTAGTAACGCGGGAGAGGA
GAGAGGGTAGATATCGCCAGACAGCCGCAGTGGAACAGCCTGGCGCATCC
AGCATACTAGAATGGAAACGTGTATTATGGACGAGTGCTAGACTGGTGTA
GTCAAGATGTTTCGTGTCTGTTTTTTCCTCGATTCATCTCGAGGTATAAA
GATTCGTTTTTCAGAAGTTACTTGATTATATTAGTATGAAACTGTCCCAG
AATATGAAGACGACAAAGAAATGGGGGGAAAAAAATTAATCTGCGAACGT
AGTTCTCTGGCCAACAGACCCGCTCCTACCGCAGGAGATGCGCTAATTTA
CTCTCCACTTCCCGCTCACTCCTTAAAACAGCCCCGATACTCAGACAATT
CATATATGTCCATGCCCTTCCTTCTGTGCGCTTCGTTATCGTTTTCTTCC
ACGAACGAATGGCCAGTTCAGTCCGCCAGCATTCGCGAACAAATCCAACA
CCACGCGGGAGGCACCCAATCAAGAATCATGAAGCTGGCATCCTGTATCA
TTGTGTGTGCTTGTGCGCTGGTATCGCGGACAGTTGAAGCCTTCGTACCT
GCAGGACTGCCTCGCAGTTTCGCGGGCACTGCGAGCGCCCGTCGAGCAGT
GGCCTCTTCACCGACAGACTCTTCTAGGCGAGTATCCGGCTGTTTGTGCC
TGTATATTATCAAGAATTCGGAGTCTCTTCGTTTTTAGAATGACGTGTAG
AATTCGCGACGGAAACTAACAATTATTAGCTCGAAAATTCAGCATGACAA
GGACATTAGGTCTATATGCCCCCGGATCATGTACGACGGAAACTAGCAAG
AGCAAAACAAAAAACAGGGGTTCAAAAACTTGATTTTGGGGAAAAATATT
GTTTCGTATATACGTAAACAGATTCCGGCCATATTCAGTTACAGTTACTG
CGAATATTTAGCCCCGCCCAAATATGGTGATGTGATCGGCGGAGACAGCC
TCACACCTGACTATGGCCGCGATGTACGCACGTGCACCTGTGTTTGTCTG
TTTTTCCTTACAGCCTGTACCTGAATCTGGCAAAGATAACCGCGGAAAGT
CACACACAAGAACCCTGCAACAGTGACAATGAACGTACCGGCATCCACTT
TCTGCCTCTTTCTTCCGCAAAATGGTAGATCTTACCGTTGTGCTCGACTC
TTTGGCAACCTGATCTCCGACCACTATCCACATGCAACAAGCATCCTGGG
CTAATTGGTATTCCCGAAGAATACTGTTTGACCCCGCAAAACAGTCACAG
GAATCACCTCGATAGGCATACATTGCATATTGGGGATGTAGAATCGACGA
TAGCCCAGCATCACCCCAGCTCGCCATCCAGTCAAAAACACCCCCACGAC
CGACCATATATTGTAGAGGGCCGCAGCGGACAGCAGGAGGCCCCCAGTGC
TAAAAATACGTACTACCCACCACAGTCGGAAACATTCACTAGTTGTCCTG
CTCATCATTTCGCACTCATATCACCCGCCGCCGCTTATCCCCCGAAAAAA
CACGTGTATATTTGCGTTTCACGCCGCTGACAGCCGCCCCCTAGATGCAT
GTGTTCTGATTTTTTTTCGACCTGTGTGTCGTATTTGTGGGTGTGATATG
TAAAATATGAACTTGATGTCTTTGCCGTCGCGCAGCAACTGACGCGTTAC
GGCGACTTTCAGCCATGGAATGTGAGCAAACCTTTGCGCTACCTCAACCA
GCGCAAACTCGGTCATGATACCTGATAATCCCTACTTAACTGCAATACAA
CACTTGCTTTGATGGTTGGTCATAGGAGTGTTGTTGACTGGGCGGAGGGG
TGGGGTGATGCTGGGCTATCGTCGTTCGTAGATTCCCAATATGCAAACGT
ATGTCTGTCGGGGTGATTTATGTGGCTTTGGTGTGGGGTCGATCAACTTT
CTTCGGAAAACCAATTAGTCCACTTAGTGGGCATTTATTGCGCCCTTACT
TGTTTCCCCACGTCTGCTTTAGTTCGAGAGATCAGCCGATGACTAGCTTG
CTTTATATCTAGGGCCTCCTTTTTTGTGATAGGAAGGGTAAAGTCCGCTG
TCGATAAAGGTAAGCTGCAGATGATATTCGTGTTACTCTGCTCGCTGCTA
TCAAGAGTGCATTAGAGCACAGAACGGTGTGGTAATTGTTCTGCTTAGCA
AGTTTTTCTGTGGCCCCTAGTCCGTTGCATGCATCTGTTTTCGCCACTTC
TGGAAAGTCATGTTCCACGCCCCATGTCCCGAGTCTCCACCTTCTGGAAA
AGTCGACTGAAAAAATCAAAATGCACTAGTTGTGGAAACTGCTCAAGTAT
AAATCGATAATAGCAAAGTAACAAAAAATTCTGCACCCTCCGAATCCCGC
CATTAACCCCTCCTGTGCGCGCGCGATAGCAGACAACACGGCTTCATCTC
ACAGGCATCAGCGTTCGCGGGATCTCCCGTGGCAACTATCGCAACATCCC
CCTGCTCGCGATATGTGTCCGGCCCACCGTGCACCACGACCATGGGCCTG
TTTGGTCTAGGCGCACCGGAGATTGCGGTCTGTCTTGCCGTGGCTGCGCT
TATTCTGGGGCCGGACAAGCTCGCAGGTAAGCATAGTGCAAAGGCTATTT
TTGCAACATGCTAACGATGTAAACACACGATGACATGAATTTGTTGAACT
CGAATTAAAATCAGAGTTTGCAAAAACGAATTTTTCCCCTGGCTTTTGTC
ACAAATGGCGGGGAAATTATGTGTGTGCACTATGTTAGCACATGACCCCA
AGTTTAGTGGGCATGTCTGTCTACACCTCTGTCAGTTCCTGGTGGTAACC
AAACTGGATTTTTTCTGTAGTCGTCGCGATGTTACCGAAATCTTCCCCGT
TCTCCAAGTATCTTACCGAGACCTGACTATACAGCATATGCTCTATTTTG
ACAGTACAGGATACGAAGAGCGTTTCTATCGGCGTTGCAAGTTCTAGCTT
CCGGCAAAAATAGCGCAACCTTTTCTTGACTTGATGTTGGAATTTACTGT
GCTCTTTCAATGACGCCGGATGTTGAATCTTTCGAAGTTGAGAAATATAT
CAGGAGCCATCTTTCATTCAATGGACGTGCTATTTTGACGAGAACGCGAT
TTCGAATTTCGAAGTCCAAAGACGGGCATTGCGAGAGGGTCATGTGATGC
CTCGCAGTGTAACATATAGTGCCCGTGGGCTTCCAATGTCCATGTAGACA
TAGTAACCTAGGTATCGTTTGCGCTTGTCGATAGTAGCTGGGATGCTGAA
AAAAACGTCGAGGTGTGTTGTTCGATAGGATGGGCGTACTCCTTGGAGTA
CAACGGAGACGTGGTCATTTGGGTGTGGCAGTGCGGGATTTCTCACTAGT
CGGACGACTAGAGACGAAAAAATTGTCGCGATTCGGAGTGATCGATTCAC
GCTGCTCAAGGACTCCCTGGGTAACACGCGAAGGCAATGGATGTGTTGAG
GTTGGAACGAAGAACCTATTTTGTATAGATTCCTTTTGGGAACCTTGAAG
GTCTTTTGCCCGTTTTGAGCACACGTGCGTTGTCTGCGCACGCGAATATT
AGTTGGTTGCCGTTAAGCATGTCGTAGCCCCATGGTTCGTTCCCCAGTCG
GCTTAGCAGTGCTTGTTTCATCACTTGCTGTTTTTGCCCCCATTGAGGCA
ATAGAGAAAAGTTTCATAATTGACAAAAAAATCAAGCACTTTGGTGACAT
TTTCCTACGTGGACCGGTCTTCAGGTGTCGCTAAGGATGTGGGAAAGATG
GCCGGTGAGCTGAAGGATGTACCTGCTGAATTTCAGGTATGTACTACCTG
TGATGAGTTATGTCTTTCCTGAGGGGAGGGATGCTGTTGCACTGTACCGT
GGGGGAATCTGTCACCCCCCGGATAAATACGAACACTTGCAAAGGGTTTT
CGCAAAAAACTGAAAGTATTCGACTGAAAGTATTCGTGTATCTATTTGCC
CTGGACCAACCACGACTGCTAATAATACCCCCAAATCGAATGAACAGGGA
TGGGTACTTTACTCTCTGTCCACTCATTCTGAAACTCAGTCGAATACTTT
CCGTTTTTGTGAAAACCATCAGCAAATATTCGTTTTTGTCCGGGGGGTGG
TATCTTTGCCCAGCGAGTGTGTGCTTTATGGTACCAGTATCATTGTGATA
CGATGTTCTTCATCTGGATAGGGGTACCATAGTACCGAATAATGTCTTCC
TCCAGGAAGGGGGTACGCGAAATTCAATAAAGTGTCTTTACTGACTGTCC
TGAGTTTTTGTTTTTTCGTATTTTATGATTTTGTTGGATCGTGTATATAC
TTCCCACTCCGAGATATCCCAATGTACCAAATTTCGACAGGCAGAACTGC
TTTGAACGGGTTTAGATCACACCGTATGTCGACAAGCATATGATAGATGG
TACTGCGGAATCTGGACGTGTTTTGGATATCAGTATGAATTTCGAATATC
AGATGTCGACGCTGGGTGTAAAAGGGCATCGGATATTTTGACAACGATCA
CGTACGTCAAGGGCTGGCACAGCAGCCGGAGTGCCGTGTACTTGATGAAA
AAATGGTACAGCTGACACCCTGCAGTTCCCACATTAGGTTCCTCGAGCGG
TGGCAGTCAGCTGCACAGCGCAAACCACATAATGCCGTAGAGTTAGGCCC
GGCAAGGCAATATACAGACAGCACTGCCGTGTGCACAGTGTAGACAGTTG
GTGTACTGCTGCATGCAGTAACATCTGTGTGGTACACAAGAACTGGCAGA
CACAAGCATACTATCCCTAGATTTCCGTAGTAAACGATAGCCGCTGCGTG
TGTGGCGTCCTGTTCTGAGTGACGGTACCCTGAGGCACAGCAGCAGGTGG
TCTGCCACAGTCAGTCGTGGCAGTTGGGACACGACAAGACGACTGAGATA
TATATATATATATATCGTGGTTGGTAATGAGGCACCGGGCTGCCTGAAAC
AACCCCCCCCCCCAGGTTTAAGGGGTTACGGAGGGTACTTTCCTTGCCCG
TCGTCGTTGTAAGCGTATTTTGTGTGTTGTGAATGGATTATTCTATTGAT
GATAGAACAGGAGCTCCAGCTACACAATGATCTCTTCCTGGTGCTAGATG
AGCTTTGAGCCTCGTTTTGCGGACGTTCTGACGCAAGATAATAACTCGAA
ATTGCCTTTCGTTACGACGACAGGAAGGAACGCTGTCGTATCAAGATGGT
GTTTTTCAGGACAAACGACGAAAAAATGTGTATTTTTTGTATGCACGTGT
TGAAGTACGAAATGTTTCAGGTGCTTCCTGGTGATTTTTGTTCTATGCTG
ACTGAACTATCAGCAATTTATCACCACCTGGACAACACGAATACTTGCGA
ATGGTTTTCACAGAACTCTGAAAGTAACCCCCTGAGTTTTAAAATGAGCT
CGTGTGTTACATGTGCCTCGGACCATCCACGGCTGCTAATGATACTCGTA
AATCTCTTTAACAGGGGTGGGTACTTGATTCTATGCGTCTGCTTATTCTG
AAACTCGGGCGGATACTTTCAGTTTTTTGTTTGAAATCATTAGTAGGTAT
TCGTATTTGTCCGGGGGGTGAAATGTTTCAAGGACATGCAAATATGGAGA
AAAAATCCTTCGATGAAGAAACAACGAGGCTGTTCATTTTTCCACCTTCC
TTATGTCACGAGAAGAAAACATAAGACCCAACTGTTTCATGTGTGTATGT
AACTGTCGAATATCATGACCCAAAAATGATACATAAAAAATCGTGACATT
TTTTTTTTTTAATTTGGTGTTCCCCATTGAGTTATCTGCACTCGACGTAA
TCAACGTTGTACTGTGTTTGTTTTTATATATACATTTTTTTTGGGGGGGG
GGGCGGATTGTTCTCAGGCCGGTATTGAGGAAGGAGAGGCGGCGCTTCAG
CAGACCAAGGCACTCAAGTCCAAGCCTGGGGAGGCTGTTATGGATGCAGA
AGAAGTCGCGGAGAAGGAGACGGAGGCAGCCACCTGAAACAGTCCTGCTA
AGCTAATGGTGTAACGGCCTGACTAGCGCGATGACGGTGTAGGCTGACGT
ACGGCTAACATAAAAGGGTAGTTGGGGGGTACATGTGGGGCGACCAAGAG
TTGAATAACAAACCGCAAGTTGAACTCTCTTTCTTTTTTGTCGTGGGCCT
CTTTCGCGAAGAGAGACGGGGTAAGATAATTGTTCAAAGATGCTGGAGGA
TCATGATGCAAAAGGTTTGCAACTGCTGATCCTTTGATGCACGGAAGATC
TCGTCGGGTCTGCTCGGGTTAAGCTTTTGACACTTTTTAGAGAGATGTAA
AGTTGGTTGGCGATCAACTTCCGAAGTGATGGATGAATGAGCTATTGCGA
GATGTGGTTGTATGTGATAGCTTCAGCTGCGTACTCCGTCCACCTGGTAT
TTATTTTGTATGCCCCGCTGTTCGCTTGGACGAATTTGGTCTGATCTGGT
CCAGTGTATTTGATGCATCTATCAAATGAATGTGTCGAGGGCTGGCATGT
ATCCTGGTTGAGATCTGATGATAGGGTGCAAAACTCTCACACGTTGACCT
CCGATTATCCTTATAGGGGAGCCGCCACAGTTTGGTTCCACCGCTGAGCC
GACCAGCCACATTTCCCAGAGTAAGCAGTACAGTAACGGGAGGCCAGACA
AGAAGAATGAAATATCTCAGTCGCAATCGAATGAAGCAATAGTTTAACAA
TATATTGAAGTATCCAGTGCGTGACAGCACATGATGTTCCCATCGCATCC
CCTGCAAGCTCCACTGGTGCGTCTCTCTACTGTGGGTGTAGGTCAACTCT
TATGGCATCTAAAATGATTAATGAAAATGGGCAGGGGTGTTGGGCAGGTG
GGTTCACTAACACCAAGGAAAAAACTAC
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Coding sequence (CDS) from alignment at H-paniculata_contig2122:13464..21541+

>mRNA_H-paniculata_contig2122.5565.1 ID=mRNA_H-paniculata_contig2122.5565.1|Name=mRNA_H-paniculata_contig2122.5565.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1050bp|location=Sequence derived from alignment at H-paniculata_contig2122:13464..21541+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGCTGGCATCCTGTATCATTGTGTGTGCTTGTGCGCTGGTATCGCG
GACAGTTGAAGCCTTCGTACCTGCAGGACTGCCTCGCAGTTTCGCGGGCA
CTGCGAGCGCCCGTCGAGCAGTGGCCTCTTCACCGACAGACTCTTCTAGA
TGAAGCTGGCATCCTGTATCATTGTGTGTGCTTGTGCGCTGGTATCGCGG
ACAGTTGAAGCCTTCGTACCTGCAGGACTGCCTCGCAGTTTCGCGGGCAC
TGCGAGCGCCCGTCGAGCAGTGGCCTCTTCACCGACAGACTCTTCTAGAC
AACACGGCTTCATCTCACAGGCATCAGCGTTCGCGGGATCTCCCGTGGCA
ACTATCGCAACATCCCCCTGCTCGCGATATGTGTCCGGCCCACCGTGCAC
CACGACCATGGGCCTGTTTGGTCTAGGCGCACCGGAGATTGCGGTCTGTC
TTGCCGTGGCTGCGCTTATTCTGGGGCCGGACAAGCTCGCAGACAACACG
GCTTCATCTCACAGGCATCAGCGTTCGCGGGATCTCCCGTGGCAACTATC
GCAACATCCCCCTGCTCGCGATATGTGTCCGGCCCACCGTGCACCACGAC
CATGGGCCTGTTTGGTCTAGGCGCACCGGAGATTGCGGTCTGTCTTGCCG
TGGCTGCGCTTATTCTGGGGCCGGACAAGCTCGCAGGTGTCGCTAAGGAT
GTGGGAAAGATGGCCGGTGAGCTGAAGGATGTACCTGCTGAATTTCAGGT
GTCGCTAAGGATGTGGGAAAGATGGCCGGTGAGCTGAAGGATGTACCTGC
TGAATTTCAGGCCGGTATTGAGGAAGGAGAGGCGGCGCTTCAGCAGACCA
AGGCACTCAAGTCCAAGCCTGGGGAGGCTGTTATGGATGCAGAAGAAGTC
GCGGAGAAGGAGACGGAGGCAGCCACCTGAGCCGGTATTGAGGAAGGAGA
GGCGGCGCTTCAGCAGACCAAGGCACTCAAGTCCAAGCCTGGGGAGGCTG
TTATGGATGCAGAAGAAGTCGCGGAGAAGGAGACGGAGGCAGCCACCTGA
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