prot_H-paniculata_contig2116.5540.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2116.5540.1
Unique Nameprot_H-paniculata_contig2116.5540.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length157
Homology
[Close]
BLAST of mRNA_H-paniculata_contig2116.5540.1 vs. uniprot
Match: A0A6H5K5M7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5M7_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 1.760e-17
Identity = 53/125 (42.40%), Postives = 69/125 (55.20%), Query Frame = 0 
Query:   19 MTVHFPPPPMSLLALFNRDLHGYDAAAPD-DDKWAELPFVVVESWGGVEVEELQPSAERDLQSDAPMSLISPPSKSNADEYRRFKRIASGNFPE----------TPCKMDVETAANGIASFNTNS 132
            M +HFPPPP SLL +F+RDLHG+D+AA D DD+W ELPF+V+ESWGG   E   P  +   Q  AP+S +        DEYR F+ IAS +             +P      TA+ G+   N  S
Sbjct:  347 MLMHFPPPPQSLLPVFDRDLHGFDSAARDLDDRWGELPFLVLESWGGSGEE---PKTDPAPQEPAPLSPMQ-----GGDEYRLFQEIASNSLHRKKPPAAAAGSSPLVNGKATASGGVGGANDTS 463
[Close]
BLAST of mRNA_H-paniculata_contig2116.5540.1 vs. uniprot
Match: D8LJW1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJW1_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 3.300e-17
Identity = 47/92 (51.09%), Postives = 60/92 (65.22%), Query Frame = 0 
Query:   19 MTVHFPPPPMSLLALFNRDLHGYDAAAPD-DDKWAELPFVVVESWGGVEVEELQPSAERDLQSDAPMSLISPPSKSNADEYRRFKRIASGNF 109
            M +HFPPPP SLL +F+RDLHG+D+AA D DD+W ELPF+VVESWGG   E   P  +   Q  AP+S +        DE+R F+ IAS + 
Sbjct:  640 MFMHFPPPPQSLLPVFDRDLHGFDSAARDLDDRWGELPFLVVESWGGSGEE---PKTDLPPQEPAPLSPMQ-----GGDEFRLFQEIASNSL 723
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2116.5540.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K5M7_9PHAE1.760e-1742.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJW1_ECTSI3.300e-1751.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2116contigH-paniculata_contig2116:18677..19543 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2116.5540.1mRNA_H-paniculata_contig2116.5540.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2116 18677..19544 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2116.5540.1 ID=prot_H-paniculata_contig2116.5540.1|Name=mRNA_H-paniculata_contig2116.5540.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=157bp
ASAGEERASGALEYSLAAMTVHFPPPPMSLLALFNRDLHGYDAAAPDDDK
WAELPFVVVESWGGVEVEELQPSAERDLQSDAPMSLISPPSKSNADEYRR
FKRIASGNFPETPCKMDVETAANGIASFNTNSNKHHSMRTVAGRHTNDKM
INDIVAL
back to top