prot_H-paniculata_contig21144.5529.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig21144.5529.1
Unique Nameprot_H-paniculata_contig21144.5529.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length108
Homology
BLAST of mRNA_H-paniculata_contig21144.5529.1 vs. uniprot
Match: D8LLG1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG1_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 1.550e-37
Identity = 65/108 (60.19%), Postives = 82/108 (75.93%), Query Frame = 0
Query:    1 LAGNPWIEPPWDVIRGGWKIIINYYDDVRRSGSTTVHRFKVVFLGAVLAGKTSLAKGLEQGKPALTLDEERTRGVDVHIQPWRPDPNQPLEVIIWDFAGHADYYSTHQ 108
            L GNPW  PPW+VI+GGW  ++++++ + +SG   V   KVV +GAV AGKT+LA+GL  GK A TL   RTRG+DVHIQPW PD + PLEV+IWDFAGH DY+STHQ
Sbjct:  150 LKGNPWETPPWNVIQGGWDQVVSFHEGLSQSGGQVVPSLKVVLVGAVGAGKTTLARGLLDGKIAQTLPP-RTRGIDVHIQPWVPDFDPPLEVLIWDFAGHDDYHSTHQ 256          
BLAST of mRNA_H-paniculata_contig21144.5529.1 vs. uniprot
Match: A0A6H5L6I0_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6I0_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 2.250e-33
Identity = 62/109 (56.88%), Postives = 79/109 (72.48%), Query Frame = 0
Query:    1 LAGNPWIEPPWDVIRGGWKIIINYYDDVRRSGSTTV-HRFKVVFLGAVLAGKTSLAKGLEQGKPALTLDEERTRGVDVHIQPWRPDPNQPLEVIIWDFAGHADYYSTHQ 108
            L  N W +PPW VI+GGW  +I++Y+ + +SG+  V    KVVF+GAV AGKT+L +GL  GK A  L   RTRGVDVH+ PW P+ + P+EV+IWDFAGH DYYSTHQ
Sbjct:   39 LELNRWNKPPWQVIQGGWYQVISFYEGLAQSGAVAVVPSLKVVFVGAVHAGKTTLTRGLLDGKLAK-LPPPRTRGVDVHVNPWTPNFDPPVEVVIWDFAGHDDYYSTHQ 146          
BLAST of mRNA_H-paniculata_contig21144.5529.1 vs. uniprot
Match: D7FUH6_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH6_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 6.290e-31
Identity = 60/109 (55.05%), Postives = 75/109 (68.81%), Query Frame = 0
Query:    1 LAGNPWIEPPWDVIRGGWKIIINYYDDVRRSGSTTV-HRFKVVFLGAVLAGKTSLAKGLEQGKPALTLDEERTRGVDVHIQPWRPDPNQPLEVIIWDFAGHADYYSTHQ 108
            L  N W  PPW VI+GGW  +I++Y+ + +SG   V    KVV +GAV AGKT+L +GL  GK A  +   RTRGVDVHI PW P+ +  +EV+IWDFAGH DYYSTHQ
Sbjct:  144 LELNRWKNPPWQVIQGGWYQVISFYEGLAQSGGVAVVPSLKVVLVGAVHAGKTTLTRGLLDGKLAK-VPPPRTRGVDVHINPWTPNFDPAVEVVIWDFAGHDDYYSTHQ 251          
BLAST of mRNA_H-paniculata_contig21144.5529.1 vs. uniprot
Match: D8LKS5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS5_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 1.980e-17
Identity = 39/105 (37.14%), Postives = 66/105 (62.86%), Query Frame = 0
Query:    4 NPWIEPPWDVIRGGWKIIINYYDDVRRSGSTTVHRFKVVFLGAVLAGKTSLAKGLEQGKPALTLDEERTRGVDVHIQPWRPDPNQPLEVIIWDFAGHADYYSTHQ 108
            NPW  PP  V+  G++  + +++DV+R G    ++ K+V +G   AGKT++ + +  G+ ++    +RT G+++    W+P    PL+V +WDFAG ADYYS+HQ
Sbjct:  248 NPWSRPPSTVLESGFERALGWWEDVKRFGEGKSNKLKMVLVGLAGAGKTTIVRHMT-GR-SVPKRSDRTVGIEITTD-WKPGDEVPLQVSVWDFAGQADYYSSHQ 349          
BLAST of mRNA_H-paniculata_contig21144.5529.1 vs. uniprot
Match: A0A7S2IWM0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IWM0_9EUKA)

HSP 1 Score: 79.0 bits (193), Expect = 7.300e-15
Identity = 40/103 (38.83%), Postives = 61/103 (59.22%), Query Frame = 0
Query:    1 LAGNPWIEPPWDVIRGGWKIIINYYDDVRRSGSTTVHRFKVVFLGAVLAGKTSLAKGLEQGKPALTLDEERTRGVDVHIQPWRPDPNQPLEVIIWDFAGHADY 103
            ++ NP   PP  V R G   I  Y++++++SGSTT    ++V +GA LAGKTSL +GL  G P  +  +ERT  +D+H  P     +Q + + +WD AG  +Y
Sbjct:  977 VSRNPLQRPPLSVARQGIDAIRRYFNELKKSGSTTSRAARLVLIGAGLAGKTSLQRGLRHGAPRPSKLDERTIQLDIHTLPLGSGADQVV-LSMWDLAGQPEY 1078          
BLAST of mRNA_H-paniculata_contig21144.5529.1 vs. uniprot
Match: UPI001601530D (malignant fibrous histiocytoma-amplified sequence 1 homolog n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001601530D)

HSP 1 Score: 78.6 bits (192), Expect = 1.000e-14
Identity = 41/108 (37.96%), Postives = 59/108 (54.63%), Query Frame = 0
Query:    1 LAGNPWIEPPWDVIRGGWKIIINYYDDVRRSGSTTVHRFKVVFLGAVLAGKTSLAKGLEQGKPALTLDEERTRGVDVHIQPWRPDPNQPLEVIIWDFAGHADYYSTHQ 108
            +  NP + PP D+   G + +  Y++D+  S ++ +   KVV LG V AGKTSLA  L+ G   LT  E+RT G++V+           L V ++DF GH  Y  THQ
Sbjct:  767 IDNNPLVSPPIDMFEHGLRGLCKYFEDMHVSSASELPTGKVVLLGEVFAGKTSLANALQLGHSKLTKVEDRTEGINVN----NTRLGAQLLVTVYDFGGHESYRLTHQ 870          
BLAST of mRNA_H-paniculata_contig21144.5529.1 vs. uniprot
Match: B7KEE8_GLOC7 (Miro domain protein n=1 Tax=Gloeothece citriformis (strain PCC 7424) TaxID=65393 RepID=B7KEE8_GLOC7)

HSP 1 Score: 78.2 bits (191), Expect = 1.350e-14
Identity = 38/100 (38.00%), Postives = 56/100 (56.00%), Query Frame = 0
Query:    9 PPWDVIRGGWKIIINYYDDVRRSGSTTVHRFKVVFLGAVLAGKTSLAKGLEQGKPALTLDEERTRGVDVHIQPWRPDPNQPLEVIIWDFAGHADYYSTHQ 108
            PP ++ + G + I  Y+   ++ G  T++  K++ LG   AGKTSLAK +E     +  DE+ T+G+DV    +  D NQ   V IWDF G   Y+ THQ
Sbjct:  316 PPLEIAQQGIEAIREYFRQKQQEGEDTLYEAKLIILGEAGAGKTSLAKKIENPNYKVPADEDSTQGIDVKEWHFTLDNNQDFRVNIWDFGGQEIYHETHQ 415          
BLAST of mRNA_H-paniculata_contig21144.5529.1 vs. uniprot
Match: C3XU23_BRAFL (Roc domain-containing protein (Fragment) n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3XU23_BRAFL)

HSP 1 Score: 77.4 bits (189), Expect = 2.500e-14
Identity = 42/108 (38.89%), Postives = 59/108 (54.63%), Query Frame = 0
Query:    1 LAGNPWIEPPWDVIRGGWKIIINYYDDVRRSGSTTVHRFKVVFLGAVLAGKTSLAKGLEQGKPALTLDEERTRGVDVHIQPWRPDPNQPLEVIIWDFAGHADYYSTHQ 108
            +  NP I PP D+   G + +  Y++D+  S ++ +   KVV LG V AGKTSLA  L+ G   LT  E+RT G++V+           L V ++DF GH  Y  THQ
Sbjct:  272 IDNNPLISPPIDMFEHGLRGLCKYFEDMHVSSASELPTGKVVLLGEVFAGKTSLANALQLGHSKLTKVEDRTEGINVNSTRL----GGQLLVTMYDFGGHESYRLTHQ 375          
BLAST of mRNA_H-paniculata_contig21144.5529.1 vs. uniprot
Match: A0A8K0AC65_BRALA (MFHAS1 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0AC65_BRALA)

HSP 1 Score: 75.9 bits (185), Expect = 8.580e-14
Identity = 41/108 (37.96%), Postives = 57/108 (52.78%), Query Frame = 0
Query:    1 LAGNPWIEPPWDVIRGGWKIIINYYDDVRRSGSTTVHRFKVVFLGAVLAGKTSLAKGLEQGKPALTLDEERTRGVDVHIQPWRPDPNQPLEVIIWDFAGHADYYSTHQ 108
            +  NP   PP D+   G   +  Y++D+  S ++ +   KVV LG V AGKTSLA  L+ G   LT  E+RT G++V+           L V ++DF GH  Y  THQ
Sbjct:   69 VDNNPLTSPPVDMFEHGLSGLSQYFEDIHVSSASELPTGKVVLLGEVFAGKTSLANALQLGHSKLTKVEDRTEGINVNSTRM----GGQLLVTVYDFGGHESYRLTHQ 172          
BLAST of mRNA_H-paniculata_contig21144.5529.1 vs. uniprot
Match: A0A1U8CW62_ALLSI (malignant fibrous histiocytoma-amplified sequence 1 homolog n=5 Tax=Crocodylia TaxID=1294634 RepID=A0A1U8CW62_ALLSI)

HSP 1 Score: 75.9 bits (185), Expect = 8.620e-14
Identity = 40/105 (38.10%), Postives = 59/105 (56.19%), Query Frame = 0
Query:    3 GNPWIEPPWDVIRGGWKIIINYYDDVRRSGSTTVHRFKVVFLGAVLAGKTSLAKGLEQGKPALTLDEERTRGVDVHIQPWRPDPNQPLEVIIWDFAGHADYYSTH 107
            GNP  EPP +V  GG + I++Y+  ++   +    R K +FLGA LAGK+++ K L+Q +      E RT G++  I  +R    Q    + WDFAG  +YY TH
Sbjct:  183 GNPLREPPGEVCAGGIQQILSYFSQLQTCQAQEDRRVKTMFLGASLAGKSTICKSLQQRRAVPLSKEARTIGIE--ISEFRI---QDFTFLFWDFAGQLEYYMTH 282          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21144.5529.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLG1_ECTSI1.550e-3760.19LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5L6I0_9PHAE2.250e-3356.88Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FUH6_ECTSI6.290e-3155.05LRR-GTPase of the ROCO family, incomplete sequence... [more]
D8LKS5_ECTSI1.980e-1737.14LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A7S2IWM0_9EUKA7.300e-1538.83Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
UPI001601530D1.000e-1437.96malignant fibrous histiocytoma-amplified sequence ... [more]
B7KEE8_GLOC71.350e-1438.00Miro domain protein n=1 Tax=Gloeothece citriformis... [more]
C3XU23_BRAFL2.500e-1438.89Roc domain-containing protein (Fragment) n=1 Tax=B... [more]
A0A8K0AC65_BRALA8.580e-1437.96MFHAS1 protein n=1 Tax=Branchiostoma lanceolatum T... [more]
A0A1U8CW62_ALLSI8.620e-1438.10malignant fibrous histiocytoma-amplified sequence ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF08477Roccoord: 40..108
e-value: 1.3E-7
score: 31.9
NoneNo IPR availableGENE3D3.30.70.1390coord: 37..108
e-value: 5.7E-14
score: 54.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 36..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21144contigH-paniculata_contig21144:764..1087 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21144.5529.1mRNA_H-paniculata_contig21144.5529.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig21144 764..1087 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig21144.5529.1 ID=prot_H-paniculata_contig21144.5529.1|Name=mRNA_H-paniculata_contig21144.5529.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=108bp
LAGNPWIEPPWDVIRGGWKIIINYYDDVRRSGSTTVHRFKVVFLGAVLAG
KTSLAKGLEQGKPALTLDEERTRGVDVHIQPWRPDPNQPLEVIIWDFAGH
ADYYSTHQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase