prot_H-paniculata_contig2104.5498.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2104.5498.1 vs. uniprot
Match: D8LCH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH0_ECTSI) HSP 1 Score: 59.7 bits (143), Expect = 3.000e-7 Identity = 49/109 (44.95%), Postives = 61/109 (55.96%), Query Frame = 0
Query: 50 DGSR-RKKRTLWSIAQQADELSQSNFVTGVFADVIGKTASPPXXXKAEVAPTSSATGSMTTRTRDRASLKSSRTTAAIVTAAAYGDASMYNSRPQQRTGTMGASSTSRL 157
DGSR R+ RTLW+IAQ ADELSQSNFVTGVFAD+ + + G + +A+ R A VTAAAYGDA +YN +R G+ A+S S L
Sbjct: 258 DGSRVRRGRTLWAIAQGADELSQSNFVTGVFADIKANS----------IGSVGGGAGG-----KPQAAKPGRR---AAVTAAAYGDARLYN----RRVGSSAAASASAL 344
BLAST of mRNA_H-paniculata_contig2104.5498.1 vs. uniprot
Match: A0A6H5J8H1_9PHAE (Structure-specific endonuclease subunit SLX4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8H1_9PHAE) HSP 1 Score: 58.9 bits (141), Expect = 5.700e-7 Identity = 54/127 (42.52%), Postives = 64/127 (50.39%), Query Frame = 0
Query: 16 LVRRRSSGGRKSESVATGVVNGERLGRRDDETSTDGSR-RKKRTLWSIAQQADELSQSNFVTGVFADVIGKTASPPXXXKAEVAPTSSATGSMTTRTRDRASLKSSRTTAAIVTAAAYGDASMYNSR 141
L+RRRS GG NG+R DGSR R+ RTLW+IAQ ADELSQS+FVTGVFAD+ + T G + + K R A VTAAAYGDA +YN R
Sbjct: 583 LIRRRSGGGANG--------NGQR-----STPGGDGSRARRGRTLWAIAQGADELSQSDFVTGVFADIRANS-------------TGGVGGGAGGKPH---AAKPGRR--AAVTAAAYGDARLYNRR 678 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2104.5498.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig2104.5498.1 ID=prot_H-paniculata_contig2104.5498.1|Name=mRNA_H-paniculata_contig2104.5498.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=173bpback to top |