prot_H-paniculata_contig210.5481.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig210.5481.1
Unique Nameprot_H-paniculata_contig210.5481.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1836
Homology
BLAST of mRNA_H-paniculata_contig210.5481.1 vs. uniprot
Match: A0A6H5L5T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5T5_9PHAE)

HSP 1 Score: 161 bits (407), Expect = 4.250e-36
Identity = 165/501 (32.93%), Postives = 200/501 (39.92%), Query Frame = 0
Query:  819 WTAGDVVVLRARVGKGTNKRGGVAQVVSVFDNGDYNVKLLIGHSRVQCVSPDLLSPYIIDDEQRISXXXXXXXXXXXXXXXTRGVRSCRSPTSAATSASGRRGDGANTTRRPDPSTGWLTPSPXXXXXXXXXXXXXAVSSSAVDFVPPRVHGRRVSSSELIYEGSXXXXXXXXXXTEEGLRPGVHL----------------------------------------GDRARVLYDDIDWWMGTVVAVDDASGSNGGGSAVEVAFTVRYDDGTSEEVKLCTGEVEVCADDDLEPVTQQVPAIPSSSRCVGGGVSKQCRPSSKNGSNSNNKNVQRAVGPQRCVLRKHEAKILTEHRARALLDTVPEKLVGLTYQELHRAHGGWWETKVTEI----LYDKGGVGVATVGVTGXXXXXXXXXXXXXXXXSQADTDMDPRWPSTIVVEQKDPKGESTGT---------------------FSTRRKVRVLLQKLKAWDKQRLEMWQ 1254
            W+ GD+VVL+AR  KG NK GGVA+V+ VF++G Y VKL +G    + V  DLL  Y    E                    RG R         ++AS RR       R  DPS GW+  SP             +   S          GR VS         XXXXXXXXXX    LR GV                                          GDRARVLYD+ DW+M TVV V   S           + TVR+DDG+   V L  G+ E+CADD L P   + P                     + GS    K V RA+G    VL + E K LTE RA+ALLDT P+KLVGL YQE HR +GGWWET VTE+    + D GG G                           D   +  WP ++VV Q D  GE                         F   RK R LL +L+ WDK R   W+
Sbjct:  583 WSKGDLVVLKARTSKGMNKLGGVARVLEVFEDGTYFVKLSLGGKPTR-VGSDLLFSYTPSPEPAF-----------------RGRRR--------STASRRRDTAEGGPREVDPSNGWVPSSPSSCSSSPSPKRTRSKDGS----------GRSVSXXXXXXXXXXXXXXXXXXXRRSLLRRGVKKNSGDGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARPGDRARVLYDNTDWYMATVVGVHRGS-----------SVTVRFDDGSKARVTLSPGDAEICADDALAPAASE-PXXXXXXXXXXXXXXXXXXXXXRPGSGVAVKGV-RALGAGGRVLGEGEGKALTEERAKALLDTAPQKLVGLVYQEHHRGYGGWWETVVTEVSEERMGDSGGAG------------------------RDKDGGGNAMWPESVVVGQMDRSGEKVKAKAGSAXXXXXXXXXXXXXEPDFVYTRKTRSLLSRLRTWDKHREAEWE 1010          
BLAST of mRNA_H-paniculata_contig210.5481.1 vs. uniprot
Match: D8LSY7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSY7_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 4.180e-33
Identity = 166/510 (32.55%), Postives = 203/510 (39.80%), Query Frame = 0
Query:  819 WTAGDVVVLRARVGKGTNKRGGVAQVVSVFDNGDYNVKLLIGHSRVQCVSPDLLSPYIIDDEQRISXXXXXXXXXXXXXXXTRGVRSCRSPTSAATSASGRRGDGANTTRRPDPSTGWLTPSPXXXXXXXXXXXXXAVSSSAVDFVPPRVHGRRVSSS------------------------------------------------ELIYEGSXXXXXXXXXXTEEGLRPGVHLGDRARVLYDDIDWWMGTVVAVDDASGSNGGGSAVEVAFTVRYDDGTSEEVKLCTGEVEVCADDDLEPVTQQVPAIPSSSRCVGGGVSKQCRPSSKNGSNSNNKNVQRAVGPQRCVLRKHEAKILTEHRARALLDTVPEKLVGLTYQELHRAHGGWWETKVTEI----LYDKGGVGVATVGVTGXXXXXXXXXXXXXXXXSQADTDMDPRWPSTIVVEQKDPKGESTGT----------------------FSTRRKVRVLLQKLKAWDKQRLEMWQ 1254
            W+ GD+VVL+AR  KG NK GGVA+V+ VF++G Y VKL +G    + V  DLL  Y    E                    RG R C +     T   G  G+        DP  G +  SP        XXXXX  + S      PR  G  VSSS                                                       XXXXXX    T+   RPG    DRARVLYD+ DW+M TVV V   S           + TVR+DDG+   + L  G+ E+CADD L P   + PA                R   + G     K V RA+G    +L + E K LTE RA+ALLDT PEKLVGL YQE HR +GGWWET VTE+    + D GG G                           D   +  WP ++VV Q D  GE   T                      F   RK R LL +L+ WDK R   W+
Sbjct:  547 WSKGDLVVLKARTSKGMNKLGGVARVLEVFEDGTYFVKLSLGGKPTR-VGSDLLFSYTPSPEPAF-----------------RGRRKCTASRRRDTPEGGGGGER-------DPHNGGVPSSPSACSSPPSXXXXXKRTKSK----NPR--GPSVSSSGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAMTKAAARPG----DRARVLYDNTDWYMATVVGVHRGS-----------SVTVRFDDGSEARLALSPGDAEICADDALAPAASEPPAXXXXXXXXXXXXXXXXR--RRPGRGVVAKGV-RALGAGGRILGEGEGKALTEERAKALLDTAPEKLVGLVYQEHHRGYGGWWETVVTEVSEERMGDSGGAG------------------------RDRDGRGNAMWPESVVVGQIDRSGEKVKTKAGSXXXXXXXXXXXXXXXEPDFVYTRKTRWLLSRLRMWDKHREAEWE 983          
BLAST of mRNA_H-paniculata_contig210.5481.1 vs. uniprot
Match: A0A6H5LPM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LPM1_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 1.300e-25
Identity = 99/285 (34.74%), Postives = 131/285 (45.96%), Query Frame = 0
Query: 1525 LTGAVEAHPHCWQPLNWGRFEGSLQTLTTESAVEVINAHAAAVSITLDCVEMYRRGVVAKTTLEAGSAKANNNSETFVAXXXXXXXXXXXXXXXXXXVLSASMIAPLFIGAGGSNKDGREAVKKCARWAARAWVRRAGGPSSTPLSH-------VETKACLLLARALGESLEAFTLAAVASSGSCSTNSVDTEGCNLVAVELESHGGELTPAVAGGKQRAXXXXXXXXXXXARSRCGLLRTLGGRPFCPRLAGMLLERLPPLQSGGGKELATGMKELRALLGRQA 1802
            +T ++EA P CWQPLNW RF+ +LQ L        + A AA + I LD +E +RR                                     XXXXX        PL +GAGG ++DGR A+K+CA+WAAR W  R  G ++            V T+ C+  +RAL E+LEAF +AA            + EGC L AV LES          GGK+ A            R   GL+R+L GR FC  LA +LLE +P  Q          +++L+ALL RQA
Sbjct:    1 MTSSLEAFPRCWQPLNWSRFDEALQDLVVGKDPLELGARAAYLGIVLDSLETFRR------------------------------QRQGAVGXXXXXXXXXXXXXPLLLGAGG-DRDGRTALKQCAKWAARVWAHRHAGVAAGAAGGRKYDEEIVNTRVCMTASRALAEALEAFRMAAG-----------ELEGCRLAAVILESESESN-----GGKEAA------------RGLAGLMRSLSGRTFCSALARVLLENMPE-QXXXXXXXVVEVEKLKALLRRQA 225          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig210.5481.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L5T5_9PHAE4.250e-3632.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSY7_ECTSI4.180e-3332.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LPM1_9PHAE1.300e-2534.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig210contigH-paniculata_contig210:18772..28798 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig210.5481.1mRNA_H-paniculata_contig210.5481.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig210 18665..30086 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig210.5481.1 ID=prot_H-paniculata_contig210.5481.1|Name=mRNA_H-paniculata_contig210.5481.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1836bp
MKRKSRQAGGISPDIWTFFSTSSLPFAGANKLKTITGCAVASTPSTACRT
PSPAAPVTARTGTKSPSAAKRTSTTRLSGGAGAGGGIPLSPKAEGSSNNK
KRKSRGAATIATSTPTRSSIPTHSSSLSRSASLTTSCPEVINIAGLSSPQ
DSSAEVVVLETRAGGGAGLNKENGIMSLSSSGVGGQPMATSANRAAAADA
DVALVEMSGYFLVRAGKEDDCFRLPLRETVVGRDSVRDKAPANRNKLRVG
IPSSLESISRDQATLQVCASSGRVLVINKKNRVRIQRWSRSAGLTIPASE
DTQGGSGGGAKNKDAATRATAAAVKAKRSVILEGGQQAYQYPGDYLELDG
WMPAGKSVYSYILHPLPPGWQPARFQGTAATPRANFPASDGSGVVKSSAS
PAATAKGRLSPAPGKMSPGLKTPSPGRERGSTAAAGGVACIHRSSVHPSV
SGLESVVTRTSYGGVTFSGDVGGKIRPSLFPATEAVVGTAAGTAGSPMSN
TSARARCLRSPASPLAAASAVEVGAKEGSAPTHRVSSCGLKTSSPTFLLA
EENETARKKLKTSAPAFPTGSGVTAVSPSSPAPSAGAAGSSVAHVTAGGG
SDENGDGSAETQSTNKRPRLEQASICVPSSGDNACEEAPPYAADGQPQQQ
QGATGAEAKPTPNVADDAPAVTMDAVVASTSVSNPDQTASNANAVDAEGQ
SGQQVEAKTAPTLHSGVVPGAQQSAAAAATTTAVAPRRLCAAKGPSQQQI
DATITPAVHSRAAEAQQHSATASTPKGVCAADAGKAGKDVAAEIGKTAGA
STAMAAAGAAAAGGGGARWTAGDVVVLRARVGKGTNKRGGVAQVVSVFDN
GDYNVKLLIGHSRVQCVSPDLLSPYIIDDEQRISAAAAAAAAAAAAATTT
RGVRSCRSPTSAATSASGRRGDGANTTRRPDPSTGWLTPSPSSSSDEDSP
ASASAVSSSAVDFVPPRVHGRRVSSSELIYEGSSSSSAAAAAATEEGLRP
GVHLGDRARVLYDDIDWWMGTVVAVDDASGSNGGGSAVEVAFTVRYDDGT
SEEVKLCTGEVEVCADDDLEPVTQQVPAIPSSSRCVGGGVSKQCRPSSKN
GSNSNNKNVQRAVGPQRCVLRKHEAKILTEHRARALLDTVPEKLVGLTYQ
ELHRAHGGWWETKVTEILYDKGGVGVATVGVTGGGGGGSEEGADGGGGSS
QADTDMDPRWPSTIVVEQKDPKGESTGTFSTRRKVRVLLQKLKAWDKQRL
EMWQEQEEQEEQRETRRRPAAQKPQRVAGRTATTTTFRRTGVRATATATT
SAQQQQSAATRAPQEDDRPPLASSSATSATKTTDSDRRQDMKFLQCSPQP
SPPPAVVARKPSSTVQKRLEKEEKIIYLLPACPMCPAKFSPNMRPEMVNA
HLSACARKAAQQEEAAALEDNEVSAAAAVAAAGVGACGGGGGGETFLSGR
PGARRMVLKSAPMAKLVSSHLAIAVGGEDVVSVVAALEGLSARGLCPSAG
LCDRAMHELLQSRCQFRTECIRRLLTGAVEAHPHCWQPLNWGRFEGSLQT
LTTESAVEVINAHAAAVSITLDCVEMYRRGVVAKTTLEAGSAKANNNSET
FVAAARASGAVGGVLEGGGGGVLSASMIAPLFIGAGGSNKDGREAVKKCA
RWAARAWVRRAGGPSSTPLSHVETKACLLLARALGESLEAFTLAAVASSG
SCSTNSVDTEGCNLVAVELESHGGELTPAVAGGKQRAAAAAAAAAAAAAR
SRCGLLRTLGGRPFCPRLAGMLLERLPPLQSGGGKELATGMKELRALLGR
QAGAAADTRVGGSAAGKRSGASVCSGSAMLLGCLV*
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