prot_H-paniculata_contig20999.5475.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20999.5475.1
Unique Nameprot_H-paniculata_contig20999.5475.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length38
Homology
BLAST of mRNA_H-paniculata_contig20999.5475.1 vs. uniprot
Match: D8LS73_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS73_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 9.660e-16
Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 0
Query:    1 VWDVTTQQCSATLTHHQDKVQGVAWHPVEATVIATMG 37
            VWDVTTQQCSATLTHH DKVQGVAWHPVEATV+AT+G
Sbjct:  185 VWDVTTQQCSATLTHHSDKVQGVAWHPVEATVMATVG 221          
BLAST of mRNA_H-paniculata_contig20999.5475.1 vs. uniprot
Match: A0A6H5JP62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP62_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 1.010e-15
Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 0
Query:    1 VWDVTTQQCSATLTHHQDKVQGVAWHPVEATVIATMG 37
            VWDVTTQQCSATLTHH DKVQGVAWHPVEATV+AT+G
Sbjct:  318 VWDVTTQQCSATLTHHSDKVQGVAWHPVEATVMATVG 354          
BLAST of mRNA_H-paniculata_contig20999.5475.1 vs. uniprot
Match: U6KXP6_EIMTE (AT4g18900/F13C5_70, related n=1 Tax=Eimeria tenella TaxID=5802 RepID=U6KXP6_EIMTE)

HSP 1 Score: 51.2 bits (121), Expect = 2.320e-6
Identity = 19/35 (54.29%), Postives = 27/35 (77.14%), Query Frame = 0
Query:    1 VWDVTTQQCSATLTHHQDKVQGVAWHPVEATVIAT 35
            +WD+TT  C +T  HH +KVQ +AWHP EA+++AT
Sbjct:  290 LWDLTTGSCLSTYKHHSNKVQAIAWHPSEASLLAT 324          
BLAST of mRNA_H-paniculata_contig20999.5475.1 vs. uniprot
Match: A0A0G4IUY3_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IUY3_PLABS)

HSP 1 Score: 50.8 bits (120), Expect = 3.180e-6
Identity = 18/33 (54.55%), Postives = 28/33 (84.85%), Query Frame = 0
Query:    1 VWDVTTQQCSATLTHHQDKVQGVAWHPVEATVI 33
            +WD+ TQ+C++TL+HH+DKVQ V+W+P E  V+
Sbjct:  260 LWDLPTQRCTSTLSHHKDKVQSVSWNPTEPVVL 292          
BLAST of mRNA_H-paniculata_contig20999.5475.1 vs. uniprot
Match: UPI001E8E0F19 (putative rRNA processing protein Pwp1 n=1 Tax=Talaromyces proteolyticus TaxID=1131652 RepID=UPI001E8E0F19)

HSP 1 Score: 48.1 bits (113), Expect = 2.850e-5
Identity = 17/33 (51.52%), Postives = 27/33 (81.82%), Query Frame = 0
Query:    1 VWDVTTQQCSATLTHHQDKVQGVAWHPVEATVI 33
            +WD++TQ+C+ + THH+DKV  + WHP E+TV+
Sbjct:  292 LWDLSTQKCAKSYTHHKDKVCALDWHPKESTVL 324          
BLAST of mRNA_H-paniculata_contig20999.5475.1 vs. uniprot
Match: B5YM77_THAPS (Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YM77_THAPS)

HSP 1 Score: 48.1 bits (113), Expect = 2.860e-5
Identity = 24/46 (52.17%), Postives = 29/46 (63.04%), Query Frame = 0
Query:    1 VWDVTTQ---------QCSATLTHHQDKVQGVAWHPVEATVIATMG 37
            +WDVT           + SATLTHH DKVQ +AWHP E T++AT G
Sbjct:  178 LWDVTHTTRGKGGDYVRPSATLTHHSDKVQSLAWHPSEGTLLATGG 223          
BLAST of mRNA_H-paniculata_contig20999.5475.1 vs. uniprot
Match: A0A7S2KJ73_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KJ73_9STRA)

HSP 1 Score: 47.0 bits (110), Expect = 4.360e-5
Identity = 20/28 (71.43%), Postives = 23/28 (82.14%), Query Frame = 0
Query:   10 SATLTHHQDKVQGVAWHPVEATVIATMG 37
            SATLTHH DKVQ +AWHP E T++AT G
Sbjct:   22 SATLTHHTDKVQSLAWHPSEGTLLATGG 49          
BLAST of mRNA_H-paniculata_contig20999.5475.1 vs. uniprot
Match: A0A0U1LTC1_TALIS (Putative WD repeat-containing protein C17D11,16 n=2 Tax=Talaromyces sect. Islandici TaxID=2752542 RepID=A0A0U1LTC1_TALIS)

HSP 1 Score: 47.4 bits (111), Expect = 5.330e-5
Identity = 17/33 (51.52%), Postives = 26/33 (78.79%), Query Frame = 0
Query:    1 VWDVTTQQCSATLTHHQDKVQGVAWHPVEATVI 33
            +WD++TQ+C+ + THH DKV  + WHP E+TV+
Sbjct:  300 LWDLSTQKCAKSYTHHTDKVCALDWHPKESTVL 332          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20999.5475.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LS73_ECTSI9.660e-1691.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JP62_9PHAE1.010e-1591.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
U6KXP6_EIMTE2.320e-654.29AT4g18900/F13C5_70, related n=1 Tax=Eimeria tenell... [more]
A0A0G4IUY3_PLABS3.180e-654.55Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
UPI001E8E0F192.850e-551.52putative rRNA processing protein Pwp1 n=1 Tax=Tala... [more]
B5YM77_THAPS2.860e-552.17Predicted protein (Fragment) n=1 Tax=Thalassiosira... [more]
A0A7S2KJ73_9STRA4.360e-571.43Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A0U1LTC1_TALIS5.330e-551.52Putative WD repeat-containing protein C17D11,16 n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..37
e-value: 3.4E-9
score: 38.2
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..37
score: 10.153
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 1..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20999contigH-paniculata_contig20999:3948..4061 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20999.5475.1mRNA_H-paniculata_contig20999.5475.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20999 3948..4061 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20999.5475.1 ID=prot_H-paniculata_contig20999.5475.1|Name=mRNA_H-paniculata_contig20999.5475.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=38bp
VWDVTTQQCSATLTHHQDKVQGVAWHPVEATVIATMG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf