prot_H-paniculata_contig20846.5420.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20846.5420.1
Unique Nameprot_H-paniculata_contig20846.5420.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length92
Homology
BLAST of mRNA_H-paniculata_contig20846.5420.1 vs. uniprot
Match: D7FNW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNW6_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 1.540e-38
Identity = 62/82 (75.61%), Postives = 76/82 (92.68%), Query Frame = 0
Query:    8 AELRSLHPILARADIMSRDNTSSFGALGMLMIKGVLAYVLVRLGRSQEGLQVLEPVAGLLSENPGLLRQVMCWHLSHCVLVS 89
            AEL SL PIL RAD MSRDN+SSFGALG++++KGVLAY+L+RLGRSQ+GL+VLEPV G+L+ENPGLLRQVMCWHLS C+L++
Sbjct:    2 AELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSRCILLA 83          
BLAST of mRNA_H-paniculata_contig20846.5420.1 vs. uniprot
Match: D8LD81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD81_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 5.670e-37
Identity = 67/88 (76.14%), Postives = 79/88 (89.77%), Query Frame = 0
Query:    1 IYSVQVTAELRSLHPILARADIMSRDNTSSFGALGMLMIKGVLAYVLVRLGRSQEGLQVLEPVAGLLSENPGLLRQVMCWHLSHCVLV 88
            I   QV AEL SL PIL RAD MSRDN+SSFGALG++++KGVLAY+L+RLGRSQ+GL+VLEPV G+L+ENPGLLRQVMCWHLSHC+LV
Sbjct:  297 ISKAQVMAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSHCILV 384          
BLAST of mRNA_H-paniculata_contig20846.5420.1 vs. uniprot
Match: A0A6H5K8W2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W2_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 1.260e-36
Identity = 64/83 (77.11%), Postives = 77/83 (92.77%), Query Frame = 0
Query:    6 VTAELRSLHPILARADIMSRDNTSSFGALGMLMIKGVLAYVLVRLGRSQEGLQVLEPVAGLLSENPGLLRQVMCWHLSHCVLV 88
            V AEL SL PIL RAD MS+DN+SSFGALG++++KGVLAY+L+RLGRSQ+GL+VLEPV G+L+ENPGLLRQVMCWHLSHC+LV
Sbjct:  215 VMAELNSLLPILTRADGMSQDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSHCILV 297          
BLAST of mRNA_H-paniculata_contig20846.5420.1 vs. uniprot
Match: A0A6H5K9S8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9S8_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 3.890e-36
Identity = 63/84 (75.00%), Postives = 77/84 (91.67%), Query Frame = 0
Query:    6 VTAELRSLHPILARADIMSRDNTSSFGALGMLMIKGVLAYVLVRLGRSQEGLQVLEPVAGLLSENPGLLRQVMCWHLSHCVLVS 89
            V AEL SL PIL RAD MSRDN+SSFG LG++++KGVLAY+L+RLGRSQ+GL+VLEPV G+L+ENPGLLRQVMCWHLSHC+L++
Sbjct:  341 VMAELNSLLPILTRADGMSRDNSSSFGTLGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSHCILLA 424          
BLAST of mRNA_H-paniculata_contig20846.5420.1 vs. uniprot
Match: D8LD86_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD86_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 7.820e-36
Identity = 66/88 (75.00%), Postives = 78/88 (88.64%), Query Frame = 0
Query:    1 IYSVQVTAELRSLHPILARADIMSRDNTSSFGALGMLMIKGVLAYVLVRLGRSQEGLQVLEPVAGLLSENPGLLRQVMCWHLSHCVLV 88
            I   QV AEL SL PIL RAD MSRDN+SSFGALG++++KGVLAY+L+RLGRSQ+GL+VLEPV G+L+ENPGLLRQVMCWHLS C+LV
Sbjct:  299 ISKAQVMAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSRCILV 386          
BLAST of mRNA_H-paniculata_contig20846.5420.1 vs. uniprot
Match: A0A6H5JWQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWQ9_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 4.680e-28
Identity = 57/90 (63.33%), Postives = 68/90 (75.56%), Query Frame = 0
Query:    8 AELRSLHPILARADIMSRDNTSSFGALGMLMIKGVLAYVLVRLGRS-------QEGLQ---VLEPVAGLLSENPGLLRQVMCWHLSHCVL 87
            AEL SL PIL RAD  SRDN+SSFGALG++++ GVLA +L+RLG S       + GL    VLEPV G+L+E PGLLRQVMCWHLSHC+L
Sbjct:    2 AELNSLLPILTRADGRSRDNSSSFGALGVVLVNGVLASILLRLGLSVSTTSWMRNGLGNVWVLEPVVGILAETPGLLRQVMCWHLSHCIL 91          
BLAST of mRNA_H-paniculata_contig20846.5420.1 vs. uniprot
Match: A0A835Z8X2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8X2_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 2.180e-19
Identity = 43/80 (53.75%), Postives = 56/80 (70.00%), Query Frame = 0
Query:    9 ELRSLHPILARADIMSRDNTSSFGALGMLMIKGVLAYVLVRLGRSQEGLQVLEPVAGLLSENPGLLRQVMCWHLSHCVLV 88
            EL +L P+L  AD +     +SFGALG +++K  LAYVL+RLGR+ E L+ LEPV  LLS +PGL+RQ   WHL HC +V
Sbjct:    3 ELSALVPLLLDADDLCARAAASFGALGTVLVKCALAYVLLRLGRTAECLRALEPVVPLLSLHPGLVRQSAVWHLVHCAMV 82          
BLAST of mRNA_H-paniculata_contig20846.5420.1 vs. uniprot
Match: A0A6H5JUV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV1_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 1.830e-16
Identity = 39/54 (72.22%), Postives = 49/54 (90.74%), Query Frame = 0
Query:    6 VTAELRSLHPILARADIMSRDNTSSFGALGMLMIKGVLAYVLVRLGRSQEGLQV 59
            V AEL SL PIL RAD MS+DN+SSFGALG++++KGVLAY+L+RLGRSQ+GL+V
Sbjct:   90 VMAELNSLLPILTRADGMSQDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEV 143          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20846.5420.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FNW6_ECTSI1.540e-3875.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LD81_ECTSI5.670e-3776.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K8W2_9PHAE1.260e-3677.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9S8_9PHAE3.890e-3675.00Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LD86_ECTSI7.820e-3675.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWQ9_9PHAE4.680e-2863.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z8X2_9STRA2.180e-1953.75Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A6H5JUV1_9PHAE1.830e-1672.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..48
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 49..91
NoneNo IPR availableTMHMMTMhelixcoord: 31..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20846contigH-paniculata_contig20846:792..3292 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20846.5420.1mRNA_H-paniculata_contig20846.5420.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20846 792..3292 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20846.5420.1 ID=prot_H-paniculata_contig20846.5420.1|Name=mRNA_H-paniculata_contig20846.5420.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=92bp
IYSVQVTAELRSLHPILARADIMSRDNTSSFGALGMLMIKGVLAYVLVRL
GRSQEGLQVLEPVAGLLSENPGLLRQVMCWHLSHCVLVSEQ*
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