prot_H-paniculata_contig204.5285.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig204.5285.1
Unique Nameprot_H-paniculata_contig204.5285.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length793
Homology
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BLAST of mRNA_H-paniculata_contig204.5285.1 vs. uniprot
Match: A0A6H5KXZ9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXZ9_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 1.190e-17
Identity = 92/265 (34.72%), Postives = 134/265 (50.57%), Query Frame = 0 
Query:  517 LSKVEQRELETRQEANRLASSAEEVVRKLERTESELFEAKVPRKVSIKAIMADVNHLANELVAQTAVARDDVIAAAAKEAQKAHAITLPYWEQGVEAAAXXXXXXXXXXXXXXXXXXEVLTVCRGKFDESVGVAAGEQWLVVRKVCSENLDKAMATWENWEVAVVKQLISSGLPEEEAQRTMKYLNLFALANVGLLFLVYLSGSVLSYVIVPTVRRALGLVIWVVKVPFRILFLPFRLXXXXXXXMYRLIFGGKPAAPGKKPRAS 781
            L++ E +E + R+E +R    A+E+  KLERT SEL  A+ PR VS+ AI ADV  L N LV Q+  ARDD++  A+++ + A  +  P++E  VEA+     XXXXXXXXXXXXXX                                        +     +V  L+  G+P++EA++T +Y+N   LA V +  +VY  GS + Y I P +R  L L +WV+ +P RIL              +RL+FGG+ A     P A+
Sbjct:  211 LTRAEAKESKAREEHDR---HAQEMRGKLERTASELELARKPRVVSMTAICADVKELGNNLVEQSKDARDDIVKRASEKLEMARVVVHPHYESAVEASKPVVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKSDESAAWIVSVLVRWGMPDQEAEKTCRYVNNLLLAMVVVALVVYFGGSTVKYFIWPVLRTVLRLALWVLVLPLRILXXXXXXVLWVLLKCFRLVFGGRGAGNAAPPAAA 472
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig204.5285.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KXZ9_9PHAE1.190e-1734.72Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 124..344
NoneNo IPR availableCOILSCoilCoilcoord: 528..551
NoneNo IPR availableCOILSCoilCoilcoord: 431..458
NoneNo IPR availableCOILSCoilCoilcoord: 348..420
NoneNo IPR availableCOILSCoilCoilcoord: 489..523
NoneNo IPR availablePANTHERPTHR34491FAMILY NOT NAMEDcoord: 127..553
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 734..759
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 703..727
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..702
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 33..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 18..32
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 728..733
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 760..792
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..40
score: 0.844
NoneNo IPR availableTMHMMTMhelixcoord: 704..726
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availableTMHMMTMhelixcoord: 733..755

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig204contigH-paniculata_contig204:17895..35517 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig204.5285.1mRNA_H-paniculata_contig204.5285.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig204 17836..37287 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig204.5285.1 ID=prot_H-paniculata_contig204.5285.1|Name=mRNA_H-paniculata_contig204.5285.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=793bp
MTFYASRSRHATARLTRCALLSVLLLAFLLGLSQLRVCQADDTASVAAVE
QEMFVDATGELETVVAEEKKDPEIIAAVAPEDIAQPEETPEEVEKVDTKA
EGDGEDSAVQPDKIQQVCFSADHVRELEQRSDSFKLQLTTAEELSATLQL
EVAAAEEKKVTLAKELTDLEDQLAELSAIKLEASATEEEKAALAKEADDL
KKKLAELATVKLEAAATEEERAALAKEAEELKEQLAEMATVKLEAAASKE
EKVALAKETDELKEKLVALAALEAEAAAAEEEKTALVKETGELKEKLAEL
ATVKLEAAATEEERAALAKEADGLKEQLAELATVKLEAAATKEEKVALAK
ETDELKVKLVALAALEAEAAAAEEEKAALVKEAGELKKHLAELSVLKLEV
AAKEEEKTTLAIEADGLKEQLAKLATVKLEATTTKEQKEALAKEADELKE
KVGELMVVLEGVGGADGISQLREKVSMTETAVKEREDTIMRAGEESAALQ
QNLEASQEELAEVRGALSKVEQRELETRQEANRLASSAEEVVRKLERTES
ELFEAKVPRKVSIKAIMADVNHLANELVAQTAVARDDVIAAAAKEAQKAH
AITLPYWEQGVEAAAPYWKQAVDLSEPHRTQAAEVLTVCRGKFDESVGVA
AGEQWLVVRKVCSENLDKAMATWENWEVAVVKQLISSGLPEEEAQRTMKY
LNLFALANVGLLFLVYLSGSVLSYVIVPTVRRALGLVIWVVKVPFRILFL
PFRLLMWVLRLMYRLIFGGKPAAPGKKPRASKSKNKKAKKNN*
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