prot_H-paniculata_contig18767.4660.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18767.4660.1
Unique Nameprot_H-paniculata_contig18767.4660.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length334
Homology
[Close]
BLAST of mRNA_H-paniculata_contig18767.4660.1 vs. uniprot
Match: D8LFW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFW3_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 1.280e-11
Identity = 45/95 (47.37%), Postives = 54/95 (56.84%), Query Frame = 0 
Query:   19 DVDTLGNVAALVGGNQHLFFASVCRSWRVAWRQRHRST--LTAIVRPDSSVSQLLYSFECGARTTAGVCEAAARAGNLQVLQCARRIGCPWHTKT 111
            +VD +  +A  V   QHLFFA V   WR AW +R  ST  +T  V P    SQL +SF CG R  A VCEA A  G L+VL+ AR + CPW   T
Sbjct:   36 NVDIVRCLADFVHDEQHLFFAGVSTLWREAWGRRPTSTRAITEHVTP----SQLCWSFSCGLRKRAEVCEAIAGFGKLEVLKRARELKCPWGRST 126
[Close]
BLAST of mRNA_H-paniculata_contig18767.4660.1 vs. uniprot
Match: D8LDD9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDD9_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 1.900e-10
Identity = 42/101 (41.58%), Postives = 54/101 (53.47%), Query Frame = 0 
Query:   16 FVTDVDTLGNVAALVGGNQHLFFASVCRSWRVAWRQRHRSTLTAIVRPDSSVSQLLYSFECGARTTA-GVCEAAARAGNLQVLQCARRIGCPWHTKTWGKA 115
            F    D + + +  V  +Q LFFASV R+WR AWR R   T T  + PD+S SQL +S +CG       VC A A  G L +L+ AR +G  W   T  KA
Sbjct:    5 FQATADVISHASEFVHDDQFLFFASVSRAWRGAWRGR--PTSTRAITPDTSPSQLRHSVDCGLSPGGTAVCTAIASLGRLDLLRAARALGFRWDKMTCWKA 103
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18767.4660.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LFW3_ECTSI1.280e-1147.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LDD9_ECTSI1.900e-1041.58Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 47..321
e-value: 5.9E-11
score: 43.5
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 187..326
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 187..326
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 79..169
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 79..169
NoneNo IPR availableSUPERFAMILY140860Pseudo ankyrin repeat-likecoord: 150..286

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18767contigH-paniculata_contig18767:2666..3667 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18767.4660.1mRNA_H-paniculata_contig18767.4660.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18767 2656..4254 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18767.4660.1 ID=prot_H-paniculata_contig18767.4660.1|Name=mRNA_H-paniculata_contig18767.4660.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=334bp
MDCSRSLQLTLELHAFVTDVDTLGNVAALVGGNQHLFFASVCRSWRVAWR
QRHRSTLTAIVRPDSSVSQLLYSFECGARTTAGVCEAAARAGNLQVLQCA
RRIGCPWHTKTWGKAARGGHLDVLVWAQENGCPKDDDTCLEAARGGHLHI
LQWARTYGCPWARDTVVPVSVGSIEHSNNYVSHTWDTCSVSAEAGHLHIL
KWAKENGCPWDSKTCSGAATGGHLNVLQWARENGCEWDSTTCFRAAEGGF
LETLQWARLNGCPWDAMTCLGAADGGHLEILRYARENGCPLHAKTWRTAA
LQGHLHVLLWGLENSYPMGDDSSLEALMGGSVP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf