prot_H-paniculata_contig18428.4527.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18428.4527.1
Unique Nameprot_H-paniculata_contig18428.4527.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length89
Homology
[Close]
BLAST of mRNA_H-paniculata_contig18428.4527.1 vs. uniprot
Match: A0A6H5LEG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEG7_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 4.670e-7
Identity = 27/35 (77.14%), Postives = 31/35 (88.57%), Query Frame = 0 
Query:   54 KSRTEAFSALPVGTQAYFNSQAGAGVLATVPGSVA 88
            KSRTEAFSA+PVG QAYFNSQAG G+LA +PG +A
Sbjct:  741 KSRTEAFSAVPVGAQAYFNSQAGVGMLAVIPGGIA 775
[Close]
BLAST of mRNA_H-paniculata_contig18428.4527.1 vs. uniprot
Match: D7G3P6_ECTSI (Origin recognition complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3P6_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 6.160e-7
Identity = 27/35 (77.14%), Postives = 30/35 (85.71%), Query Frame = 0 
Query:   54 KSRTEAFSALPVGTQAYFNSQAGAGVLATVPGSVA 88
            KSRTEAFSA+PVG QAYFNSQAG G LA +PG +A
Sbjct:   52 KSRTEAFSAVPVGAQAYFNSQAGVGTLAVIPGGIA 86
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18428.4527.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LEG7_9PHAE4.670e-777.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3P6_ECTSI6.160e-777.14Origin recognition complex subunit 2 n=1 Tax=Ectoc... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18428contigH-paniculata_contig18428:1393..3357 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18428.4527.1mRNA_H-paniculata_contig18428.4527.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18428 1393..3376 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18428.4527.1 ID=prot_H-paniculata_contig18428.4527.1|Name=mRNA_H-paniculata_contig18428.4527.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=89bp
MWSSSDGGGDGEGDEGRNFFGDAESDFEEGNEDEMDDPNLGVADGSTSAR
ANKKSRTEAFSALPVGTQAYFNSQAGAGVLATVPGSVAT
back to top