prot_H-paniculata_contig18253.4450.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18253.4450.1
Unique Nameprot_H-paniculata_contig18253.4450.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length329
Homology
BLAST of mRNA_H-paniculata_contig18253.4450.1 vs. uniprot
Match: D8LLN0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLN0_ECTSI)

HSP 1 Score: 212 bits (539), Expect = 5.860e-58
Identity = 157/346 (45.38%), Postives = 198/346 (57.23%), Query Frame = 0
Query:    1 MEEQVYYLLGKLDLTFKRREDSLFAYRMEAEEGAREARALLGEAAAQHRRECGGNGGVSRIPPLR---GSRERPAGAPRPALHASNLLFTAAAILHDANMRAHQQSP----STGAVTEQSRSLTSSCRTMCRRRMKSSPAEQSLITLADEVMKALEEEQNRSDAFTQRLKFVTDSGNPPSFSR----GMPPSGVPPLVWGMIIHVVGKLAQAYKTIVEARVFEREVADADLVAAITLGQSSGIGDDDGFHQSGFGCDTAPALWRRVGGPDHS-------STRVSDGPEAVNPVGTLVSEQGKGNTFCEFGWGADNYTHFRSDRPASATVVGAGDAAGGGRFARSPT 328
            ME+QVY LLGKLDL  KRRED L+AY  EAEEGAREARALL  AAAQH    G   GVSR P +R   G RE PAGAPRPA++ +NLLFTAA +L      A   +P    S+    E+  S +    +   RR + SPAE++L+ LADEV+ AL+ EQ RSDA  +R +   D  N    SR    G PP GVPPL+W M IH+VGKLA+A++T VEAR FEREV DA+LVAA+TLG+SS    + G + SG        +   + G +         + R  +  E+         EQ +      FGWGAD Y+  R  RP +  V   G   G  ++  SPT
Sbjct: 1065 MEQQVYGLLGKLDLLLKRREDVLWAYHREAEEGAREARALLASAAAQH--HPGQAWGVSRPPNVRQLIGGREGPAGAPRPAINPTNLLFTAAVVLDSVAAAAAGPTPEPTVSSAPTPEKIPSASGGSES---RRQRYSPAEKALLELADEVVAALDVEQRRSDASAERRRLAVDRHNNSGDSRFQALGRPPLGVPPLIWAMEIHLVGKLARAFRTAVEARGFEREVEDANLVAAVTLGRSSPPSSNGGKNDSGPPWHLEHRMLSVLRGDEEEERERLQRARREFENTESCTMAANNQREQQR------FGWGADTYSPRRIYRPMTGNV---GTDEGQPKYGSSPT 1396          
BLAST of mRNA_H-paniculata_contig18253.4450.1 vs. uniprot
Match: A0A6H5L495_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L495_9PHAE)

HSP 1 Score: 130 bits (327), Expect = 8.460e-30
Identity = 96/244 (39.34%), Postives = 133/244 (54.51%), Query Frame = 0
Query:   78 ALHASNLLFTAAAILHDANMRAHQQSP----STGAVTEQSRSLTSSCRTMCRRRMKSSPAEQSLITLADEVMKALEEEQNRSDAFTQRLKFVTDSGNPPSFSR----GMPPSGVPPLVWGMIIHVVGKLAQAYKTIVEARVFEREVADADLVAAITLGQSSGIGDDDGFHQSGFGCDTAPALWRRVGGPDHS-------STRVSDGPEAVNPVGTLVSEQGKGNTFCEFGWGADNYTHFRSDRP 306
            A++ ++LLFTAA +L      A   +P    ++    E++ S      +   RR + SPAE++L+ LADEV+ AL+ EQ RSDA  +R +FV D  N    SR    G PP GVPPL+W M IH+VGKLA+A++T VEAR FEREV DA+LVAA+TLG+SS      G + SG        +   + G +         + R  +  E+   V     +Q        FGWGAD Y+  R+ RP
Sbjct: 1177 AINPTDLLFTAAVVLDSVTAGASGPTPEPTVASAPTPEKNPSANGGSES---RRQRYSPAEKALLKLADEVVAALDVEQRRSDASAERRRFVADRHNNFGDSRTQALGRPPLGVPPLIWAMEIHLVGKLARAFRTAVEARGFEREVEDANLVAAVTLGRSSPPSSKGGKNDSGPPWHLEHRMLSVLRGDEDEEKERRQRAQREFENDESCTMVNNQREQQ-------RFGWGADTYSPRRNHRP 1410          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18253.4450.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLN0_ECTSI5.860e-5845.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L495_9PHAE8.460e-3039.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 141..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18253contigH-paniculata_contig18253:210..3079 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18253.4450.1mRNA_H-paniculata_contig18253.4450.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18253 129..4585 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18253.4450.1 ID=prot_H-paniculata_contig18253.4450.1|Name=mRNA_H-paniculata_contig18253.4450.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=329bp
MEEQVYYLLGKLDLTFKRREDSLFAYRMEAEEGAREARALLGEAAAQHRR
ECGGNGGVSRIPPLRGSRERPAGAPRPALHASNLLFTAAAILHDANMRAH
QQSPSTGAVTEQSRSLTSSCRTMCRRRMKSSPAEQSLITLADEVMKALEE
EQNRSDAFTQRLKFVTDSGNPPSFSRGMPPSGVPPLVWGMIIHVVGKLAQ
AYKTIVEARVFEREVADADLVAAITLGQSSGIGDDDGFHQSGFGCDTAPA
LWRRVGGPDHSSTRVSDGPEAVNPVGTLVSEQGKGNTFCEFGWGADNYTH
FRSDRPASATVVGAGDAAGGGRFARSPT*
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